Protein–RNA interactions for Protein: Q9NX78

TMEM260, Transmembrane protein 260, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260Q9NX78 SNORA31.2-201ENST00000516019 134 ntBASIC1.75□□□□□ -2.13
TMEM260Q9NX78 MIR3152-201ENST00000579801 74 ntBASIC1.75□□□□□ -2.13
TMEM260Q9NX78 uc_338.28-201ENST00000612082 187 ntBASIC1.75□□□□□ -2.13
TMEM260Q9NX78 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
TMEM260Q9NX78 SNORA25.3-201ENST00000363205 127 ntBASIC1.74□□□□□ -2.13
TMEM260Q9NX78 SNORA1.1-201ENST00000364671 133 ntBASIC1.74□□□□□ -2.13
TMEM260Q9NX78 RNY1P6-201ENST00000384193 109 ntBASIC1.74□□□□□ -2.13
TMEM260Q9NX78 RNU6-1054P-201ENST00000411293 104 ntBASIC1.74□□□□□ -2.13
TMEM260Q9NX78 AC245047.7-201ENST00000440265 293 ntBASIC1.74□□□□□ -2.13
TMEM260Q9NX78 AL137067.1-201ENST00000615933 120 ntBASIC1.74□□□□□ -2.13
TMEM260Q9NX78 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.74□□□□□ -2.13
TMEM260Q9NX78 MIR450A1-201ENST00000362262 91 ntBASIC1.73□□□□□ -2.13
TMEM260Q9NX78 RNA5SP264-201ENST00000363115 107 ntBASIC1.73□□□□□ -2.13
TMEM260Q9NX78 MIR1304-201ENST00000408243 91 ntBASIC1.73□□□□□ -2.13
TMEM260Q9NX78 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.73□□□□□ -2.13
TMEM260Q9NX78 AC048334.1-201ENST00000477975 159 ntBASIC1.73□□□□□ -2.13
TMEM260Q9NX78 MIR548AO-201ENST00000579992 96 ntBASIC1.73□□□□□ -2.13
TMEM260Q9NX78 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.73□□□□□ -2.13
TMEM260Q9NX78 Y_RNA.327-201ENST00000365201 102 ntBASIC1.72□□□□□ -2.13
TMEM260Q9NX78 RNU6-396P-201ENST00000365369 105 ntBASIC1.72□□□□□ -2.13
TMEM260Q9NX78 Y_RNA.549-201ENST00000384657 102 ntBASIC1.72□□□□□ -2.13
TMEM260Q9NX78 RNA5SP89-201ENST00000410300 108 ntBASIC1.72□□□□□ -2.13
TMEM260Q9NX78 RNU6-113P-201ENST00000516653 101 ntBASIC1.72□□□□□ -2.13
TMEM260Q9NX78 RNY4P20-201ENST00000516678 93 ntBASIC1.72□□□□□ -2.13
TMEM260Q9NX78 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.72□□□□□ -2.13
TMEM260Q9NX78 AL035470.1-201ENST00000622571 220 ntBASIC1.72□□□□□ -2.13
TMEM260Q9NX78 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
TMEM260Q9NX78 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.72□□□□□ -2.13
TMEM260Q9NX78 RNU6-349P-201ENST00000362402 107 ntBASIC1.71□□□□□ -2.14
TMEM260Q9NX78 Y_RNA.116-201ENST00000363292 103 ntBASIC1.71□□□□□ -2.14
TMEM260Q9NX78 Y_RNA.118-201ENST00000363300 101 ntBASIC1.71□□□□□ -2.14
TMEM260Q9NX78 RNU6-690P-201ENST00000365242 106 ntBASIC1.71□□□□□ -2.14
TMEM260Q9NX78 Y_RNA.508-201ENST00000384502 114 ntBASIC1.71□□□□□ -2.14
TMEM260Q9NX78 RNU6-913P-201ENST00000390913 95 ntBASIC1.71□□□□□ -2.14
TMEM260Q9NX78 SNORA67.6-201ENST00000391093 99 ntBASIC1.71□□□□□ -2.14
TMEM260Q9NX78 RNU6-893P-201ENST00000458841 100 ntBASIC1.71□□□□□ -2.14
TMEM260Q9NX78 RNU11-2P-201ENST00000516898 142 ntBASIC1.71□□□□□ -2.14
TMEM260Q9NX78 HSPE1P19-201ENST00000603327 295 ntBASIC1.71□□□□□ -2.14
TMEM260Q9NX78 AC012493.3-201ENST00000604494 112 ntBASIC1.71□□□□□ -2.14
TMEM260Q9NX78 AL020996.3-201ENST00000606617 222 ntBASIC1.71□□□□□ -2.14
TMEM260Q9NX78 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
TMEM260Q9NX78 RNU4-16P-201ENST00000364737 141 ntBASIC1.7□□□□□ -2.14
TMEM260Q9NX78 MIR222-201ENST00000384992 110 ntBASIC1.7□□□□□ -2.14
TMEM260Q9NX78 MT-TI-201ENST00000387365 69 ntBASIC1.7□□□□□ -2.14
TMEM260Q9NX78 RNA5SP136-201ENST00000410906 107 ntBASIC1.7□□□□□ -2.14
TMEM260Q9NX78 AL354695.1-201ENST00000427935 228 ntBASIC1.7□□□□□ -2.14
TMEM260Q9NX78 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.7□□□□□ -2.14
TMEM260Q9NX78 MIR2115-201ENST00000516657 100 ntBASIC1.7□□□□□ -2.14
TMEM260Q9NX78 AC007012.1-201ENST00000567192 175 ntBASIC1.7□□□□□ -2.14
TMEM260Q9NX78 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
TMEM260Q9NX78 Y_RNA.354-201ENST00000365448 111 ntBASIC1.69□□□□□ -2.14
TMEM260Q9NX78 Y_RNA.355-201ENST00000365462 98 ntBASIC1.69□□□□□ -2.14
TMEM260Q9NX78 MIR517C-201ENST00000385103 95 ntBASIC1.69□□□□□ -2.14
TMEM260Q9NX78 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.69□□□□□ -2.14
TMEM260Q9NX78 RNU6-554P-201ENST00000410466 106 ntBASIC1.69□□□□□ -2.14
TMEM260Q9NX78 COX6CP6-201ENST00000490840 228 ntBASIC1.69□□□□□ -2.14
TMEM260Q9NX78 RNU6-168P-201ENST00000516189 101 ntBASIC1.69□□□□□ -2.14
TMEM260Q9NX78 RNU1-92P-201ENST00000517017 135 ntBASIC1.69□□□□□ -2.14
TMEM260Q9NX78 MIR4679-2-201ENST00000578358 77 ntBASIC1.69□□□□□ -2.14
TMEM260Q9NX78 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.69□□□□□ -2.14
TMEM260Q9NX78 AC021613.1-201ENST00000623880 111 ntBASIC1.69□□□□□ -2.14
TMEM260Q9NX78 SNORA7.1-201ENST00000363750 139 ntBASIC1.68□□□□□ -2.14
TMEM260Q9NX78 Y_RNA.281-201ENST00000364774 94 ntBASIC1.68□□□□□ -2.14
TMEM260Q9NX78 RNU6-106P-201ENST00000384405 107 ntBASIC1.68□□□□□ -2.14
TMEM260Q9NX78 SNORD38B-201ENST00000384690 67 ntBASIC1.68□□□□□ -2.14
TMEM260Q9NX78 MIR320A-201ENST00000385302 82 ntBASIC1.68□□□□□ -2.14
TMEM260Q9NX78 SNORD12C-201ENST00000386307 89 ntBASIC1.68□□□□□ -2.14
TMEM260Q9NX78 RNU6-1319P-201ENST00000390855 104 ntBASIC1.68□□□□□ -2.14
TMEM260Q9NX78 RNU6-747P-201ENST00000390928 104 ntBASIC1.68□□□□□ -2.14
TMEM260Q9NX78 RNU6-241P-201ENST00000391148 104 ntBASIC1.68□□□□□ -2.14
TMEM260Q9NX78 RNU6-177P-201ENST00000411257 104 ntBASIC1.68□□□□□ -2.14
TMEM260Q9NX78 RPS3AP1-201ENST00000413190 320 ntBASIC1.68□□□□□ -2.14
TMEM260Q9NX78 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.68□□□□□ -2.14
TMEM260Q9NX78 RNU7-123P-201ENST00000515911 60 ntBASIC1.68□□□□□ -2.14
TMEM260Q9NX78 RNA5SP170-201ENST00000517150 101 ntBASIC1.68□□□□□ -2.14
TMEM260Q9NX78 SNORA70.22-201ENST00000517160 124 ntBASIC1.68□□□□□ -2.14
TMEM260Q9NX78 AC022523.2-201ENST00000561045 150 ntBASIC1.68□□□□□ -2.14
TMEM260Q9NX78 MIR3122-201ENST00000577243 73 ntBASIC1.68□□□□□ -2.14
TMEM260Q9NX78 AP000753.3-201ENST00000604083 169 ntBASIC1.68□□□□□ -2.14
TMEM260Q9NX78 AC021443.1-201ENST00000604478 211 ntBASIC1.68□□□□□ -2.14
TMEM260Q9NX78 SNORD38B-202ENST00000625943 69 ntBASIC1.68□□□□□ -2.14
TMEM260Q9NX78 Y_RNA.85-201ENST00000363014 111 ntBASIC1.67□□□□□ -2.14
TMEM260Q9NX78 RNU6-1107P-201ENST00000364817 104 ntBASIC1.67□□□□□ -2.14
TMEM260Q9NX78 RNU6-910P-201ENST00000390844 107 ntBASIC1.67□□□□□ -2.14
TMEM260Q9NX78 AC023790.1-201ENST00000482174 347 ntBASIC1.67□□□□□ -2.14
TMEM260Q9NX78 SNORA31.24-201ENST00000517232 57 ntBASIC1.67□□□□□ -2.14
TMEM260Q9NX78 ZNF209P-201ENST00000593450 2304 ntBASIC1.66□□□□□ -2.14
TMEM260Q9NX78 SNORA63.5-201ENST00000363548 123 ntBASIC1.66□□□□□ -2.14
TMEM260Q9NX78 Y_RNA.298-201ENST00000364960 107 ntBASIC1.66□□□□□ -2.14
TMEM260Q9NX78 Y_RNA.495-201ENST00000384435 112 ntBASIC1.66□□□□□ -2.14
TMEM260Q9NX78 SNORA80D-201ENST00000384488 135 ntBASIC1.66□□□□□ -2.14
TMEM260Q9NX78 RNU6-1104P-201ENST00000384723 104 ntBASIC1.66□□□□□ -2.14
TMEM260Q9NX78 AL591704.2-201ENST00000421658 181 ntBASIC1.66□□□□□ -2.14
TMEM260Q9NX78 HMGN1P33-201ENST00000432945 451 ntBASIC1.66□□□□□ -2.14
TMEM260Q9NX78 AL031737.1-201ENST00000450125 223 ntBASIC1.66□□□□□ -2.14
TMEM260Q9NX78 snoU13.25-201ENST00000458945 104 ntBASIC1.66□□□□□ -2.14
TMEM260Q9NX78 RNU7-164P-201ENST00000459221 62 ntBASIC1.66□□□□□ -2.14
TMEM260Q9NX78 RNU7-45P-201ENST00000459460 63 ntBASIC1.66□□□□□ -2.14
TMEM260Q9NX78 MIR8055-201ENST00000610739 97 ntBASIC1.66□□□□□ -2.14
TMEM260Q9NX78 MIR6717-201ENST00000622747 73 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 1523.7 ms