Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 Y_RNA.604-201ENST00000410574 102 ntBASIC0.21□□□□□ -2.38
TM9SF3Q9HD45 SNORA40.8-201ENST00000411034 126 ntBASIC0.21□□□□□ -2.38
TM9SF3Q9HD45 RNU2-55P-201ENST00000411146 174 ntBASIC0.21□□□□□ -2.38
TM9SF3Q9HD45 RNA5SP153-201ENST00000516498 76 ntBASIC0.21□□□□□ -2.38
TM9SF3Q9HD45 RNU6-126P-201ENST00000516685 103 ntBASIC0.21□□□□□ -2.38
TM9SF3Q9HD45 AL662814.1-201ENST00000617364 121 ntBASIC0.21□□□□□ -2.38
TM9SF3Q9HD45 Y_RNA.42-201ENST00000362660 108 ntBASIC0.2□□□□□ -2.38
TM9SF3Q9HD45 Y_RNA.82-201ENST00000363000 102 ntBASIC0.2□□□□□ -2.38
TM9SF3Q9HD45 Y_RNA.92-201ENST00000363043 102 ntBASIC0.2□□□□□ -2.38
TM9SF3Q9HD45 RNU6-653P-201ENST00000363074 106 ntBASIC0.2□□□□□ -2.38
TM9SF3Q9HD45 Y_RNA.176-201ENST00000363815 109 ntBASIC0.2□□□□□ -2.38
TM9SF3Q9HD45 Y_RNA.235-201ENST00000364412 102 ntBASIC0.2□□□□□ -2.38
TM9SF3Q9HD45 RNU4-16P-201ENST00000364737 141 ntBASIC0.2□□□□□ -2.38
TM9SF3Q9HD45 Y_RNA.306-201ENST00000365015 102 ntBASIC0.2□□□□□ -2.38
TM9SF3Q9HD45 Y_RNA.312-201ENST00000365089 102 ntBASIC0.2□□□□□ -2.38
TM9SF3Q9HD45 Y_RNA.322-201ENST00000365151 102 ntBASIC0.2□□□□□ -2.38
TM9SF3Q9HD45 RNU6-713P-201ENST00000384761 107 ntBASIC0.2□□□□□ -2.38
TM9SF3Q9HD45 U8.15-201ENST00000390947 134 ntBASIC0.2□□□□□ -2.38
TM9SF3Q9HD45 RNA5SP237-201ENST00000410414 113 ntBASIC0.2□□□□□ -2.38
TM9SF3Q9HD45 Y_RNA.650-201ENST00000459002 102 ntBASIC0.2□□□□□ -2.38
TM9SF3Q9HD45 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.2□□□□□ -2.38
TM9SF3Q9HD45 Y_RNA.777-201ENST00000516982 102 ntBASIC0.2□□□□□ -2.38
TM9SF3Q9HD45 AC022523.2-201ENST00000561045 150 ntBASIC0.2□□□□□ -2.38
TM9SF3Q9HD45 MIR5197-201ENST00000583721 112 ntBASIC0.2□□□□□ -2.38
TM9SF3Q9HD45 Y_RNA.771-201ENST00000598668 102 ntBASIC0.2□□□□□ -2.38
TM9SF3Q9HD45 Y_RNA.789-201ENST00000622480 102 ntBASIC0.2□□□□□ -2.38
TM9SF3Q9HD45 Y_RNA.54-201ENST00000362766 105 ntBASIC0.19□□□□□ -2.38
TM9SF3Q9HD45 RNA5SP62-201ENST00000363457 110 ntBASIC0.19□□□□□ -2.38
TM9SF3Q9HD45 RNY3P5-201ENST00000384127 102 ntBASIC0.19□□□□□ -2.38
TM9SF3Q9HD45 Y_RNA.461-201ENST00000384263 103 ntBASIC0.19□□□□□ -2.38
TM9SF3Q9HD45 SNORD71-201ENST00000411292 86 ntBASIC0.19□□□□□ -2.38
TM9SF3Q9HD45 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.19□□□□□ -2.38
TM9SF3Q9HD45 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.19□□□□□ -2.38
TM9SF3Q9HD45 AP003327.1-201ENST00000529684 127 ntBASIC0.19□□□□□ -2.38
TM9SF3Q9HD45 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.19□□□□□ -2.38
TM9SF3Q9HD45 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
TM9SF3Q9HD45 SNORD118-201ENST00000363593 134 ntBASIC0.18□□□□□ -2.38
TM9SF3Q9HD45 Y_RNA.277-201ENST00000364754 102 ntBASIC0.18□□□□□ -2.38
TM9SF3Q9HD45 Y_RNA.396-201ENST00000383949 103 ntBASIC0.18□□□□□ -2.38
TM9SF3Q9HD45 RNU6-815P-201ENST00000384080 113 ntBASIC0.18□□□□□ -2.38
TM9SF3Q9HD45 RNU6-472P-201ENST00000384299 107 ntBASIC0.18□□□□□ -2.38
TM9SF3Q9HD45 AC096949.1-201ENST00000412047 152 ntBASIC0.18□□□□□ -2.38
TM9SF3Q9HD45 RPL39P25-201ENST00000449384 154 ntBASIC0.18□□□□□ -2.38
TM9SF3Q9HD45 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.18□□□□□ -2.38
TM9SF3Q9HD45 AP003072.1-201ENST00000531740 145 ntBASIC0.18□□□□□ -2.38
TM9SF3Q9HD45 Y_RNA.32-201ENST00000362589 110 ntBASIC0.17□□□□□ -2.38
TM9SF3Q9HD45 Y_RNA.76-201ENST00000362931 109 ntBASIC0.17□□□□□ -2.38
TM9SF3Q9HD45 Y_RNA.280-201ENST00000364765 112 ntBASIC0.17□□□□□ -2.38
TM9SF3Q9HD45 RNU4-17P-201ENST00000365598 141 ntBASIC0.17□□□□□ -2.38
TM9SF3Q9HD45 SNORA72.6-201ENST00000384520 129 ntBASIC0.17□□□□□ -2.38
TM9SF3Q9HD45 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.17□□□□□ -2.38
TM9SF3Q9HD45 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
TM9SF3Q9HD45 Y_RNA.588-201ENST00000391254 102 ntBASIC0.17□□□□□ -2.38
TM9SF3Q9HD45 AC141846.1-201ENST00000568348 142 ntBASIC0.17□□□□□ -2.38
TM9SF3Q9HD45 MTND5P34-201ENST00000568888 325 ntBASIC0.17□□□□□ -2.38
TM9SF3Q9HD45 MIR4282-201ENST00000583613 67 ntBASIC0.17□□□□□ -2.38
TM9SF3Q9HD45 AC044792.1-201ENST00000593294 196 ntBASIC0.17□□□□□ -2.38
TM9SF3Q9HD45 MIR8062-201ENST00000621515 85 ntBASIC0.17□□□□□ -2.38
TM9SF3Q9HD45 RNU6-728P-201ENST00000365375 104 ntBASIC0.16□□□□□ -2.38
TM9SF3Q9HD45 AC073261.1-201ENST00000429409 121 ntBASIC0.16□□□□□ -2.38
TM9SF3Q9HD45 SNORA31.14-201ENST00000516728 116 ntBASIC0.16□□□□□ -2.38
TM9SF3Q9HD45 RNU6-1258P-201ENST00000516911 111 ntBASIC0.16□□□□□ -2.38
TM9SF3Q9HD45 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.16□□□□□ -2.38
TM9SF3Q9HD45 MIR4431-201ENST00000579990 94 ntBASIC0.16□□□□□ -2.38
TM9SF3Q9HD45 MIR4491-201ENST00000581087 68 ntBASIC0.16□□□□□ -2.38
TM9SF3Q9HD45 AC011921.3-201ENST00000605540 361 ntBASIC0.16□□□□□ -2.38
TM9SF3Q9HD45 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.16□□□□□ -2.38
TM9SF3Q9HD45 AC078938.1-201ENST00000620993 318 ntBASIC0.16□□□□□ -2.38
TM9SF3Q9HD45 SNORA22.1-201ENST00000362701 134 ntBASIC0.15□□□□□ -2.39
TM9SF3Q9HD45 Y_RNA.308-201ENST00000365043 101 ntBASIC0.15□□□□□ -2.39
TM9SF3Q9HD45 RNU6-1336P-201ENST00000383886 109 ntBASIC0.15□□□□□ -2.39
TM9SF3Q9HD45 Y_RNA.412-201ENST00000384001 104 ntBASIC0.15□□□□□ -2.39
TM9SF3Q9HD45 Y_RNA.476-201ENST00000384347 108 ntBASIC0.15□□□□□ -2.39
TM9SF3Q9HD45 SNORA18-201ENST00000384416 132 ntBASIC0.15□□□□□ -2.39
TM9SF3Q9HD45 Y_RNA.542-201ENST00000384641 111 ntBASIC0.15□□□□□ -2.39
TM9SF3Q9HD45 RNU6-493P-201ENST00000391321 108 ntBASIC0.15□□□□□ -2.39
TM9SF3Q9HD45 MIR1302-6-201ENST00000408466 90 ntBASIC0.15□□□□□ -2.39
TM9SF3Q9HD45 Y_RNA.618-201ENST00000410949 107 ntBASIC0.15□□□□□ -2.39
TM9SF3Q9HD45 AL121914.1-201ENST00000450188 156 ntBASIC0.15□□□□□ -2.39
TM9SF3Q9HD45 SNORA25.16-201ENST00000516741 121 ntBASIC0.15□□□□□ -2.39
TM9SF3Q9HD45 AL365205.2-201ENST00000594586 68 ntBASIC0.15□□□□□ -2.39
TM9SF3Q9HD45 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.15□□□□□ -2.39
TM9SF3Q9HD45 MIR6082-201ENST00000613604 109 ntBASIC0.15□□□□□ -2.39
TM9SF3Q9HD45 AC021613.1-201ENST00000623880 111 ntBASIC0.15□□□□□ -2.39
TM9SF3Q9HD45 AC067863.3-201ENST00000624172 122 ntBASIC0.15□□□□□ -2.39
TM9SF3Q9HD45 MIR6841-201ENST00000637129 72 ntBASIC0.15□□□□□ -2.39
TM9SF3Q9HD45 MTND5P32-201ENST00000560711 1802 ntBASIC0.15□□□□□ -2.39
TM9SF3Q9HD45 MIR335-201ENST00000362173 94 ntBASIC0.14□□□□□ -2.39
TM9SF3Q9HD45 RNU6-1227P-201ENST00000383981 107 ntBASIC0.14□□□□□ -2.39
TM9SF3Q9HD45 RNU2-38P-201ENST00000410856 79 ntBASIC0.14□□□□□ -2.39
TM9SF3Q9HD45 SUMO1P3-201ENST00000439961 304 ntBASIC0.14□□□□□ -2.39
TM9SF3Q9HD45 AC069271.1-201ENST00000445577 156 ntBASIC0.14□□□□□ -2.39
TM9SF3Q9HD45 RNU7-80P-201ENST00000459562 61 ntBASIC0.14□□□□□ -2.39
TM9SF3Q9HD45 RNU6-863P-201ENST00000515989 104 ntBASIC0.14□□□□□ -2.39
TM9SF3Q9HD45 RNU2-4P-201ENST00000606190 192 ntBASIC0.14□□□□□ -2.39
TM9SF3Q9HD45 uc_338.16-201ENST00000621804 95 ntBASIC0.14□□□□□ -2.39
TM9SF3Q9HD45 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.14□□□□□ -2.39
TM9SF3Q9HD45 Y_RNA.171-201ENST00000363760 102 ntBASIC0.13□□□□□ -2.39
TM9SF3Q9HD45 RNU6-978P-201ENST00000364371 103 ntBASIC0.13□□□□□ -2.39
TM9SF3Q9HD45 Y_RNA.292-201ENST00000364904 97 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 228.1 ms