Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 RNU6-364P-201ENST00000384387 107 ntBASIC0.3□□□□□ -2.36
CDC42EP4Q9H3Q1 RNU6-1319P-201ENST00000390855 104 ntBASIC0.3□□□□□ -2.36
CDC42EP4Q9H3Q1 RNU6-747P-201ENST00000390928 104 ntBASIC0.3□□□□□ -2.36
CDC42EP4Q9H3Q1 RNU6-241P-201ENST00000391148 104 ntBASIC0.3□□□□□ -2.36
CDC42EP4Q9H3Q1 RNU6-447P-201ENST00000410293 104 ntBASIC0.3□□□□□ -2.36
CDC42EP4Q9H3Q1 RNU6-1118P-201ENST00000410382 104 ntBASIC0.3□□□□□ -2.36
CDC42EP4Q9H3Q1 RNU6-1076P-201ENST00000410397 104 ntBASIC0.3□□□□□ -2.36
CDC42EP4Q9H3Q1 RNU6-355P-201ENST00000410427 104 ntBASIC0.3□□□□□ -2.36
CDC42EP4Q9H3Q1 RNU6-791P-201ENST00000410467 104 ntBASIC0.3□□□□□ -2.36
CDC42EP4Q9H3Q1 RNA5SP261-201ENST00000410536 106 ntBASIC0.3□□□□□ -2.36
CDC42EP4Q9H3Q1 RNU6-705P-201ENST00000410601 104 ntBASIC0.3□□□□□ -2.36
CDC42EP4Q9H3Q1 RNU6-1100P-201ENST00000410691 104 ntBASIC0.3□□□□□ -2.36
CDC42EP4Q9H3Q1 RNU6-860P-201ENST00000410860 104 ntBASIC0.3□□□□□ -2.36
CDC42EP4Q9H3Q1 RNU6-1217P-201ENST00000411276 104 ntBASIC0.3□□□□□ -2.36
CDC42EP4Q9H3Q1 RNU6-785P-201ENST00000411324 104 ntBASIC0.3□□□□□ -2.36
CDC42EP4Q9H3Q1 RNU7-80P-201ENST00000459562 61 ntBASIC0.3□□□□□ -2.36
CDC42EP4Q9H3Q1 Y_RNA.812-201ENST00000610788 101 ntBASIC0.3□□□□□ -2.36
CDC42EP4Q9H3Q1 Y_RNA.784-201ENST00000613803 101 ntBASIC0.3□□□□□ -2.36
CDC42EP4Q9H3Q1 U6.90-201ENST00000614007 104 ntBASIC0.3□□□□□ -2.36
CDC42EP4Q9H3Q1 Y_RNA.787-201ENST00000616522 101 ntBASIC0.3□□□□□ -2.36
CDC42EP4Q9H3Q1 Y_RNA.780-201ENST00000617336 101 ntBASIC0.3□□□□□ -2.36
CDC42EP4Q9H3Q1 Y_RNA.801-201ENST00000619005 101 ntBASIC0.3□□□□□ -2.36
CDC42EP4Q9H3Q1 U6.70-201ENST00000620287 104 ntBASIC0.3□□□□□ -2.36
CDC42EP4Q9H3Q1 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
CDC42EP4Q9H3Q1 MIRLET7D-201ENST00000362263 87 ntBASIC0.29□□□□□ -2.36
CDC42EP4Q9H3Q1 RNU6-978P-201ENST00000364371 103 ntBASIC0.29□□□□□ -2.36
CDC42EP4Q9H3Q1 Y_RNA.454-201ENST00000384224 113 ntBASIC0.29□□□□□ -2.36
CDC42EP4Q9H3Q1 RNU6-738P-201ENST00000384531 106 ntBASIC0.29□□□□□ -2.36
CDC42EP4Q9H3Q1 SNORA79-201ENST00000408376 140 ntBASIC0.29□□□□□ -2.36
CDC42EP4Q9H3Q1 RNU2-38P-201ENST00000410856 79 ntBASIC0.29□□□□□ -2.36
CDC42EP4Q9H3Q1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.29□□□□□ -2.36
CDC42EP4Q9H3Q1 Y_RNA.681-201ENST00000516445 113 ntBASIC0.29□□□□□ -2.36
CDC42EP4Q9H3Q1 MIR4744-201ENST00000581563 82 ntBASIC0.29□□□□□ -2.36
CDC42EP4Q9H3Q1 AC008737.2-201ENST00000599446 118 ntBASIC0.29□□□□□ -2.36
CDC42EP4Q9H3Q1 MIR8066-201ENST00000617280 78 ntBASIC0.29□□□□□ -2.36
CDC42EP4Q9H3Q1 AL662814.1-201ENST00000617364 121 ntBASIC0.29□□□□□ -2.36
CDC42EP4Q9H3Q1 MIR6841-201ENST00000637129 72 ntBASIC0.29□□□□□ -2.36
CDC42EP4Q9H3Q1 Y_RNA.47-201ENST00000362697 108 ntBASIC0.28□□□□□ -2.36
CDC42EP4Q9H3Q1 Y_RNA.562-201ENST00000384695 113 ntBASIC0.28□□□□□ -2.36
CDC42EP4Q9H3Q1 SNORD127-201ENST00000458892 86 ntBASIC0.28□□□□□ -2.36
CDC42EP4Q9H3Q1 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
CDC42EP4Q9H3Q1 AL596211.1-201ENST00000569873 2277 ntBASIC0.27□□□□□ -2.37
CDC42EP4Q9H3Q1 Y_RNA.42-201ENST00000362660 108 ntBASIC0.27□□□□□ -2.37
CDC42EP4Q9H3Q1 Y_RNA.54-201ENST00000362766 105 ntBASIC0.27□□□□□ -2.37
CDC42EP4Q9H3Q1 Y_RNA.68-201ENST00000362881 102 ntBASIC0.27□□□□□ -2.37
CDC42EP4Q9H3Q1 SNORA63-201ENST00000363450 132 ntBASIC0.27□□□□□ -2.37
CDC42EP4Q9H3Q1 RNA5SP517-201ENST00000364724 117 ntBASIC0.27□□□□□ -2.37
CDC42EP4Q9H3Q1 RNY4P28-201ENST00000365281 93 ntBASIC0.27□□□□□ -2.37
CDC42EP4Q9H3Q1 RNU6-578P-201ENST00000390980 103 ntBASIC0.27□□□□□ -2.37
CDC42EP4Q9H3Q1 SNORD58.1-201ENST00000391313 66 ntBASIC0.27□□□□□ -2.37
CDC42EP4Q9H3Q1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.27□□□□□ -2.37
CDC42EP4Q9H3Q1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.27□□□□□ -2.37
CDC42EP4Q9H3Q1 AL121914.1-201ENST00000450188 156 ntBASIC0.27□□□□□ -2.37
CDC42EP4Q9H3Q1 RNY3P16-201ENST00000516338 101 ntBASIC0.27□□□□□ -2.37
CDC42EP4Q9H3Q1 SCARNA15-202ENST00000516881 127 ntBASIC0.27□□□□□ -2.37
CDC42EP4Q9H3Q1 RNA5SP94-201ENST00000516917 108 ntBASIC0.27□□□□□ -2.37
CDC42EP4Q9H3Q1 RNU6-448P-201ENST00000517052 107 ntBASIC0.27□□□□□ -2.37
CDC42EP4Q9H3Q1 AC092634.7-201ENST00000621022 103 ntBASIC0.27□□□□□ -2.37
CDC42EP4Q9H3Q1 MIR548H3-201ENST00000408771 118 ntBASIC0.26□□□□□ -2.37
CDC42EP4Q9H3Q1 AC096949.1-201ENST00000412047 152 ntBASIC0.26□□□□□ -2.37
CDC42EP4Q9H3Q1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.26□□□□□ -2.37
CDC42EP4Q9H3Q1 SEPT7P4-201ENST00000437076 306 ntBASIC0.26□□□□□ -2.37
CDC42EP4Q9H3Q1 SNORD116-25-201ENST00000516517 92 ntBASIC0.26□□□□□ -2.37
CDC42EP4Q9H3Q1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.26□□□□□ -2.37
CDC42EP4Q9H3Q1 MIR3152-201ENST00000579801 74 ntBASIC0.26□□□□□ -2.37
CDC42EP4Q9H3Q1 MIR378D2-201ENST00000580636 98 ntBASIC0.26□□□□□ -2.37
CDC42EP4Q9H3Q1 AC023932.2-201ENST00000603176 175 ntBASIC0.26□□□□□ -2.37
CDC42EP4Q9H3Q1 AC021613.1-201ENST00000623880 111 ntBASIC0.26□□□□□ -2.37
CDC42EP4Q9H3Q1 Y_RNA.149-201ENST00000363558 117 ntBASIC0.25□□□□□ -2.37
CDC42EP4Q9H3Q1 Y_RNA.288-201ENST00000364854 92 ntBASIC0.25□□□□□ -2.37
CDC42EP4Q9H3Q1 Y_RNA.308-201ENST00000365043 101 ntBASIC0.25□□□□□ -2.37
CDC42EP4Q9H3Q1 MIR518A1-201ENST00000385068 85 ntBASIC0.25□□□□□ -2.37
CDC42EP4Q9H3Q1 MIR624-201ENST00000385217 97 ntBASIC0.25□□□□□ -2.37
CDC42EP4Q9H3Q1 U8.15-201ENST00000390947 134 ntBASIC0.25□□□□□ -2.37
CDC42EP4Q9H3Q1 RNU6-679P-201ENST00000391003 106 ntBASIC0.25□□□□□ -2.37
CDC42EP4Q9H3Q1 RNA5SP63-201ENST00000391225 112 ntBASIC0.25□□□□□ -2.37
CDC42EP4Q9H3Q1 SNORD93-201ENST00000408813 74 ntBASIC0.25□□□□□ -2.37
CDC42EP4Q9H3Q1 RNA5SP237-201ENST00000410414 113 ntBASIC0.25□□□□□ -2.37
CDC42EP4Q9H3Q1 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.25□□□□□ -2.37
CDC42EP4Q9H3Q1 AC141846.1-201ENST00000568348 142 ntBASIC0.25□□□□□ -2.37
CDC42EP4Q9H3Q1 MIR3678-201ENST00000578455 94 ntBASIC0.25□□□□□ -2.37
CDC42EP4Q9H3Q1 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.25□□□□□ -2.37
CDC42EP4Q9H3Q1 SNORA22.1-201ENST00000362701 134 ntBASIC0.24□□□□□ -2.37
CDC42EP4Q9H3Q1 Y_RNA.121-201ENST00000363309 113 ntBASIC0.24□□□□□ -2.37
CDC42EP4Q9H3Q1 Y_RNA.459-201ENST00000384251 102 ntBASIC0.24□□□□□ -2.37
CDC42EP4Q9H3Q1 Y_RNA.539-201ENST00000384635 107 ntBASIC0.24□□□□□ -2.37
CDC42EP4Q9H3Q1 Y_RNA.588-201ENST00000391254 102 ntBASIC0.24□□□□□ -2.37
CDC42EP4Q9H3Q1 RNU6-493P-201ENST00000391321 108 ntBASIC0.24□□□□□ -2.37
CDC42EP4Q9H3Q1 RNU4-83P-201ENST00000410863 133 ntBASIC0.24□□□□□ -2.37
CDC42EP4Q9H3Q1 SNORA40.8-201ENST00000411034 126 ntBASIC0.24□□□□□ -2.37
CDC42EP4Q9H3Q1 MTND1P19-201ENST00000511780 315 ntBASIC0.24□□□□□ -2.37
CDC42EP4Q9H3Q1 AP003327.1-201ENST00000529684 127 ntBASIC0.24□□□□□ -2.37
CDC42EP4Q9H3Q1 MIR4308-201ENST00000580634 81 ntBASIC0.24□□□□□ -2.37
CDC42EP4Q9H3Q1 RNU2-4P-201ENST00000606190 192 ntBASIC0.24□□□□□ -2.37
CDC42EP4Q9H3Q1 AC090625.1-201ENST00000357130 210 ntBASIC0.23□□□□□ -2.37
CDC42EP4Q9H3Q1 SNORD44.1-201ENST00000363202 61 ntBASIC0.23□□□□□ -2.37
CDC42EP4Q9H3Q1 Y_RNA.133-201ENST00000363428 110 ntBASIC0.23□□□□□ -2.37
CDC42EP4Q9H3Q1 RNA5SP62-201ENST00000363457 110 ntBASIC0.23□□□□□ -2.37
CDC42EP4Q9H3Q1 RNA5SP117-201ENST00000365294 118 ntBASIC0.23□□□□□ -2.37
CDC42EP4Q9H3Q1 SNORA20-201ENST00000384662 132 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 281.8 ms