Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 MIR4764-201ENST00000580680 88 ntBASIC1.38□□□□□ -2.19
CDT1Q9H211 AC025166.1-201ENST00000612411 163 ntBASIC1.38□□□□□ -2.19
CDT1Q9H211 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.38□□□□□ -2.19
CDT1Q9H211 RNU6-1325P-201ENST00000364905 105 ntBASIC1.37□□□□□ -2.19
CDT1Q9H211 RNU6-44P-201ENST00000384045 107 ntBASIC1.37□□□□□ -2.19
CDT1Q9H211 Y_RNA.528-201ENST00000384575 108 ntBASIC1.37□□□□□ -2.19
CDT1Q9H211 MIR520C-201ENST00000385005 87 ntBASIC1.37□□□□□ -2.19
CDT1Q9H211 MIR548A1-201ENST00000385041 97 ntBASIC1.37□□□□□ -2.19
CDT1Q9H211 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CDT1Q9H211 Y_RNA.629-201ENST00000411368 105 ntBASIC1.37□□□□□ -2.19
CDT1Q9H211 POLR2J4-204ENST00000418424 324 ntBASIC1.37□□□□□ -2.19
CDT1Q9H211 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.37□□□□□ -2.19
CDT1Q9H211 RNU7-96P-201ENST00000459535 64 ntBASIC1.37□□□□□ -2.19
CDT1Q9H211 RNU7-80P-201ENST00000459562 61 ntBASIC1.37□□□□□ -2.19
CDT1Q9H211 RPL30P7-201ENST00000479312 323 ntBASIC1.37□□□□□ -2.19
CDT1Q9H211 RNY4P20-201ENST00000516678 93 ntBASIC1.37□□□□□ -2.19
CDT1Q9H211 RNU6-165P-201ENST00000517170 99 ntBASIC1.37□□□□□ -2.19
CDT1Q9H211 CYP3A52P-201ENST00000563326 91 ntBASIC1.37□□□□□ -2.19
CDT1Q9H211 MIR8055-201ENST00000610739 97 ntBASIC1.37□□□□□ -2.19
CDT1Q9H211 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
CDT1Q9H211 Y_RNA.171-201ENST00000363760 102 ntBASIC1.36□□□□□ -2.19
CDT1Q9H211 Y_RNA.273-201ENST00000364703 102 ntBASIC1.36□□□□□ -2.19
CDT1Q9H211 RNU7-123P-201ENST00000515911 60 ntBASIC1.36□□□□□ -2.19
CDT1Q9H211 RN7SKP179-201ENST00000516126 217 ntBASIC1.36□□□□□ -2.19
CDT1Q9H211 RNU6-113P-201ENST00000516653 101 ntBASIC1.36□□□□□ -2.19
CDT1Q9H211 RNU7-70P-201ENST00000516941 66 ntBASIC1.36□□□□□ -2.19
CDT1Q9H211 MTND5P34-201ENST00000568888 325 ntBASIC1.36□□□□□ -2.19
CDT1Q9H211 MIR548AO-201ENST00000579992 96 ntBASIC1.36□□□□□ -2.19
CDT1Q9H211 AL357312.1-201ENST00000603879 298 ntBASIC1.36□□□□□ -2.19
CDT1Q9H211 AC021443.1-201ENST00000604478 211 ntBASIC1.36□□□□□ -2.19
CDT1Q9H211 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.36□□□□□ -2.19
CDT1Q9H211 AL096861.1-201ENST00000610899 123 ntBASIC1.36□□□□□ -2.19
CDT1Q9H211 AC021613.1-201ENST00000623880 111 ntBASIC1.36□□□□□ -2.19
CDT1Q9H211 Y_RNA.298-201ENST00000364960 107 ntBASIC1.35□□□□□ -2.19
CDT1Q9H211 RNU6-53P-201ENST00000365367 106 ntBASIC1.35□□□□□ -2.19
CDT1Q9H211 RNU6-1144P-201ENST00000384247 104 ntBASIC1.35□□□□□ -2.19
CDT1Q9H211 RNU6-1064P-201ENST00000410626 104 ntBASIC1.35□□□□□ -2.19
CDT1Q9H211 RNA5SP144-201ENST00000410846 116 ntBASIC1.35□□□□□ -2.19
CDT1Q9H211 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.35□□□□□ -2.19
CDT1Q9H211 RNU7-164P-201ENST00000459221 62 ntBASIC1.35□□□□□ -2.19
CDT1Q9H211 SNORD111.1-201ENST00000516421 86 ntBASIC1.35□□□□□ -2.19
CDT1Q9H211 RN7SKP88-201ENST00000516847 250 ntBASIC1.35□□□□□ -2.19
CDT1Q9H211 MIR4305-201ENST00000583252 102 ntBASIC1.35□□□□□ -2.19
CDT1Q9H211 MIR6078-201ENST00000611069 100 ntBASIC1.35□□□□□ -2.19
CDT1Q9H211 7SK.8-201ENST00000612110 250 ntBASIC1.35□□□□□ -2.19
CDT1Q9H211 7SK.11-201ENST00000615477 250 ntBASIC1.35□□□□□ -2.19
CDT1Q9H211 7SK.13-201ENST00000622040 250 ntBASIC1.35□□□□□ -2.19
CDT1Q9H211 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CDT1Q9H211 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
CDT1Q9H211 Y_RNA.35-201ENST00000362601 101 ntBASIC1.34□□□□□ -2.19
CDT1Q9H211 Y_RNA.36-201ENST00000362602 112 ntBASIC1.34□□□□□ -2.19
CDT1Q9H211 SNORA1.2-201ENST00000365189 134 ntBASIC1.34□□□□□ -2.19
CDT1Q9H211 Y_RNA.537-201ENST00000384626 109 ntBASIC1.34□□□□□ -2.19
CDT1Q9H211 Y_RNA.549-201ENST00000384657 102 ntBASIC1.34□□□□□ -2.19
CDT1Q9H211 RNU6-476P-201ENST00000384726 107 ntBASIC1.34□□□□□ -2.19
CDT1Q9H211 MIR1302-7-201ENST00000408841 72 ntBASIC1.34□□□□□ -2.19
CDT1Q9H211 AC107297.1-201ENST00000459991 176 ntBASIC1.34□□□□□ -2.19
CDT1Q9H211 RNU7-43P-201ENST00000516554 64 ntBASIC1.34□□□□□ -2.19
CDT1Q9H211 AL020996.3-201ENST00000606617 222 ntBASIC1.34□□□□□ -2.19
CDT1Q9H211 MIR6717-201ENST00000622747 73 ntBASIC1.34□□□□□ -2.19
CDT1Q9H211 AC008133.2-201ENST00000624540 351 ntBASIC1.34□□□□□ -2.19
CDT1Q9H211 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CDT1Q9H211 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.33□□□□□ -2.2
CDT1Q9H211 MIR302B-201ENST00000362188 73 ntBASIC1.33□□□□□ -2.2
CDT1Q9H211 SNORD26-201ENST00000384147 75 ntBASIC1.33□□□□□ -2.2
CDT1Q9H211 Y_RNA.454-201ENST00000384224 113 ntBASIC1.33□□□□□ -2.2
CDT1Q9H211 Y_RNA.470-201ENST00000384307 117 ntBASIC1.33□□□□□ -2.2
CDT1Q9H211 RNU6-1319P-201ENST00000390855 104 ntBASIC1.33□□□□□ -2.2
CDT1Q9H211 RNU6-747P-201ENST00000390928 104 ntBASIC1.33□□□□□ -2.2
CDT1Q9H211 RNY4P18-201ENST00000391107 89 ntBASIC1.33□□□□□ -2.2
CDT1Q9H211 RNU6-241P-201ENST00000391148 104 ntBASIC1.33□□□□□ -2.2
CDT1Q9H211 RNU6-955P-201ENST00000410497 104 ntBASIC1.33□□□□□ -2.2
CDT1Q9H211 RNU6-177P-201ENST00000411257 104 ntBASIC1.33□□□□□ -2.2
CDT1Q9H211 Y_RNA.649-201ENST00000459077 103 ntBASIC1.33□□□□□ -2.2
CDT1Q9H211 MIR1270-201ENST00000459320 83 ntBASIC1.33□□□□□ -2.2
CDT1Q9H211 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CDT1Q9H211 MIR7974-201ENST00000615835 79 ntBASIC1.33□□□□□ -2.2
CDT1Q9H211 MIR6779-201ENST00000617283 64 ntBASIC1.33□□□□□ -2.2
CDT1Q9H211 MIR6515-201ENST00000619843 57 ntBASIC1.33□□□□□ -2.2
CDT1Q9H211 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CDT1Q9H211 MIR26B-201ENST00000362251 77 ntBASIC1.32□□□□□ -2.2
CDT1Q9H211 SNORA25.3-201ENST00000363205 127 ntBASIC1.32□□□□□ -2.2
CDT1Q9H211 SNORA51.10-201ENST00000384418 136 ntBASIC1.32□□□□□ -2.2
CDT1Q9H211 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.32□□□□□ -2.2
CDT1Q9H211 RPL39P39-201ENST00000455840 151 ntBASIC1.32□□□□□ -2.2
CDT1Q9H211 RNU7-73P-201ENST00000458743 63 ntBASIC1.32□□□□□ -2.2
CDT1Q9H211 AC004812.1-201ENST00000540773 146 ntBASIC1.32□□□□□ -2.2
CDT1Q9H211 PRELID3BP2-201ENST00000605362 201 ntBASIC1.32□□□□□ -2.2
CDT1Q9H211 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.32□□□□□ -2.2
CDT1Q9H211 U6.95-201ENST00000636931 70 ntBASIC1.32□□□□□ -2.2
CDT1Q9H211 MIR6841-201ENST00000637129 72 ntBASIC1.32□□□□□ -2.2
CDT1Q9H211 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.32□□□□□ -2.2
CDT1Q9H211 SNORA63.4-201ENST00000362763 126 ntBASIC1.31□□□□□ -2.2
CDT1Q9H211 SNORD114-22-201ENST00000365423 72 ntBASIC1.31□□□□□ -2.2
CDT1Q9H211 RNU6-1056P-201ENST00000383996 107 ntBASIC1.31□□□□□ -2.2
CDT1Q9H211 MIR548A3-201ENST00000385297 97 ntBASIC1.31□□□□□ -2.2
CDT1Q9H211 AL035461.1-201ENST00000421490 332 ntBASIC1.31□□□□□ -2.2
CDT1Q9H211 RNU6-589P-201ENST00000516485 107 ntBASIC1.31□□□□□ -2.2
CDT1Q9H211 AL670379.3-201ENST00000605040 251 ntBASIC1.31□□□□□ -2.2
CDT1Q9H211 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 197.9 ms