Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MIR516A2-201ENST00000384888 90 ntBASIC2.73□□□□□ -1.97
USB1Q9BQ65 MIR516A1-201ENST00000385033 90 ntBASIC2.73□□□□□ -1.97
USB1Q9BQ65 RNU6-243P-201ENST00000391140 107 ntBASIC2.73□□□□□ -1.97
USB1Q9BQ65 RNU6-1254P-201ENST00000391266 104 ntBASIC2.73□□□□□ -1.97
USB1Q9BQ65 AC115115.1-201ENST00000449927 248 ntBASIC2.73□□□□□ -1.97
USB1Q9BQ65 RNA5SP217-201ENST00000515959 91 ntBASIC2.73□□□□□ -1.97
USB1Q9BQ65 RNU6-539P-201ENST00000516665 103 ntBASIC2.73□□□□□ -1.97
USB1Q9BQ65 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.73□□□□□ -1.97
USB1Q9BQ65 MIR3192-201ENST00000584920 77 ntBASIC2.73□□□□□ -1.97
USB1Q9BQ65 AL357312.1-201ENST00000603879 298 ntBASIC2.73□□□□□ -1.97
USB1Q9BQ65 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
USB1Q9BQ65 AL161722.3-201ENST00000605789 2983 ntBASIC2.73□□□□□ -1.97
USB1Q9BQ65 MIR30D-201ENST00000362283 70 ntBASIC2.72□□□□□ -1.97
USB1Q9BQ65 MIR634-201ENST00000385208 97 ntBASIC2.72□□□□□ -1.97
USB1Q9BQ65 MIR1302-7-201ENST00000408841 72 ntBASIC2.72□□□□□ -1.97
USB1Q9BQ65 RNU6-1165P-201ENST00000410119 107 ntBASIC2.72□□□□□ -1.97
USB1Q9BQ65 RNA5SP341-201ENST00000516261 117 ntBASIC2.72□□□□□ -1.97
USB1Q9BQ65 MIR4264-201ENST00000583520 66 ntBASIC2.72□□□□□ -1.97
USB1Q9BQ65 FO624990.1-201ENST00000636373 85 ntBASIC2.72□□□□□ -1.97
USB1Q9BQ65 MIR513A1-201ENST00000385138 129 ntBASIC2.71□□□□□ -1.98
USB1Q9BQ65 SNORD41-201ENST00000386967 70 ntBASIC2.71□□□□□ -1.98
USB1Q9BQ65 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.71□□□□□ -1.98
USB1Q9BQ65 RNU6-871P-201ENST00000516122 100 ntBASIC2.71□□□□□ -1.98
USB1Q9BQ65 RNU6-922P-201ENST00000516753 99 ntBASIC2.71□□□□□ -1.98
USB1Q9BQ65 AC121758.2-201ENST00000553271 193 ntBASIC2.71□□□□□ -1.98
USB1Q9BQ65 MIR4529-201ENST00000578110 78 ntBASIC2.71□□□□□ -1.98
USB1Q9BQ65 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.71□□□□□ -1.98
USB1Q9BQ65 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
USB1Q9BQ65 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
USB1Q9BQ65 MIR22-201ENST00000362190 85 ntBASIC2.7□□□□□ -1.98
USB1Q9BQ65 Y_RNA.283-201ENST00000364798 112 ntBASIC2.7□□□□□ -1.98
USB1Q9BQ65 RNA5SP274-201ENST00000410484 108 ntBASIC2.7□□□□□ -1.98
USB1Q9BQ65 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.7□□□□□ -1.98
USB1Q9BQ65 SNORA31.25-201ENST00000517242 134 ntBASIC2.7□□□□□ -1.98
USB1Q9BQ65 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.7□□□□□ -1.98
USB1Q9BQ65 MIR3064-201ENST00000581130 66 ntBASIC2.7□□□□□ -1.98
USB1Q9BQ65 UBL5P2-201ENST00000583788 219 ntBASIC2.7□□□□□ -1.98
USB1Q9BQ65 AC104996.3-201ENST00000590718 94 ntBASIC2.7□□□□□ -1.98
USB1Q9BQ65 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
USB1Q9BQ65 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
USB1Q9BQ65 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
USB1Q9BQ65 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.69□□□□□ -1.98
USB1Q9BQ65 RNU6-132P-201ENST00000383863 107 ntBASIC2.69□□□□□ -1.98
USB1Q9BQ65 SNORA46-201ENST00000384762 135 ntBASIC2.69□□□□□ -1.98
USB1Q9BQ65 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
USB1Q9BQ65 MIR548U-201ENST00000390728 81 ntBASIC2.69□□□□□ -1.98
USB1Q9BQ65 SNORA48.2-201ENST00000390926 124 ntBASIC2.69□□□□□ -1.98
USB1Q9BQ65 SNORD77.2-201ENST00000391045 68 ntBASIC2.69□□□□□ -1.98
USB1Q9BQ65 AC245517.4-201ENST00000448601 281 ntBASIC2.69□□□□□ -1.98
USB1Q9BQ65 UQCRHP3-201ENST00000451503 251 ntBASIC2.69□□□□□ -1.98
USB1Q9BQ65 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.69□□□□□ -1.98
USB1Q9BQ65 AC008885.1-201ENST00000514930 301 ntBASIC2.69□□□□□ -1.98
USB1Q9BQ65 RNU6-75P-201ENST00000515944 104 ntBASIC2.69□□□□□ -1.98
USB1Q9BQ65 RNU6-807P-201ENST00000516805 107 ntBASIC2.69□□□□□ -1.98
USB1Q9BQ65 RNU6-448P-201ENST00000517052 107 ntBASIC2.69□□□□□ -1.98
USB1Q9BQ65 MIR4446-201ENST00000578505 67 ntBASIC2.69□□□□□ -1.98
USB1Q9BQ65 MIR4484-201ENST00000582855 83 ntBASIC2.69□□□□□ -1.98
USB1Q9BQ65 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
USB1Q9BQ65 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
USB1Q9BQ65 SNORA25.3-201ENST00000363205 127 ntBASIC2.68□□□□□ -1.98
USB1Q9BQ65 Y_RNA.491-201ENST00000384417 107 ntBASIC2.68□□□□□ -1.98
USB1Q9BQ65 MIR635-201ENST00000384830 98 ntBASIC2.68□□□□□ -1.98
USB1Q9BQ65 RNU6-205P-201ENST00000390858 107 ntBASIC2.68□□□□□ -1.98
USB1Q9BQ65 RNU6-466P-201ENST00000391224 103 ntBASIC2.68□□□□□ -1.98
USB1Q9BQ65 AL161935.2-201ENST00000414627 60 ntBASIC2.68□□□□□ -1.98
USB1Q9BQ65 AC022018.1-201ENST00000430685 241 ntBASIC2.68□□□□□ -1.98
USB1Q9BQ65 RNU7-62P-201ENST00000458856 62 ntBASIC2.68□□□□□ -1.98
USB1Q9BQ65 RNU6-1015P-201ENST00000517121 99 ntBASIC2.68□□□□□ -1.98
USB1Q9BQ65 SNORD92-201ENST00000585078 85 ntBASIC2.68□□□□□ -1.98
USB1Q9BQ65 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
USB1Q9BQ65 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.67□□□□□ -1.98
USB1Q9BQ65 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
USB1Q9BQ65 Y_RNA.264-201ENST00000364665 102 ntBASIC2.67□□□□□ -1.98
USB1Q9BQ65 Y_RNA.532-201ENST00000384590 113 ntBASIC2.67□□□□□ -1.98
USB1Q9BQ65 MIR128-1-201ENST00000384921 82 ntBASIC2.67□□□□□ -1.98
USB1Q9BQ65 SNORA59A-201ENST00000459326 152 ntBASIC2.67□□□□□ -1.98
USB1Q9BQ65 RN7SL20P-201ENST00000488827 297 ntBASIC2.67□□□□□ -1.98
USB1Q9BQ65 GTF3AP2-201ENST00000557014 266 ntBASIC2.67□□□□□ -1.98
USB1Q9BQ65 MIR1297-201ENST00000637311 77 ntBASIC2.67□□□□□ -1.98
USB1Q9BQ65 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
USB1Q9BQ65 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
USB1Q9BQ65 AC073325.2-201ENST00000339545 159 ntBASIC2.66□□□□□ -1.98
USB1Q9BQ65 SNORA3A-201ENST00000364113 130 ntBASIC2.66□□□□□ -1.98
USB1Q9BQ65 MT-TF-201ENST00000387314 71 ntBASIC2.66□□□□□ -1.98
USB1Q9BQ65 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.66□□□□□ -1.98
USB1Q9BQ65 RNU6-70P-201ENST00000516438 60 ntBASIC2.66□□□□□ -1.98
USB1Q9BQ65 Y_RNA.681-201ENST00000516445 113 ntBASIC2.66□□□□□ -1.98
USB1Q9BQ65 MIR2115-201ENST00000516657 100 ntBASIC2.66□□□□□ -1.98
USB1Q9BQ65 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
USB1Q9BQ65 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.65□□□□□ -1.99
USB1Q9BQ65 MT-TN-201ENST00000387400 73 ntBASIC2.65□□□□□ -1.99
USB1Q9BQ65 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.65□□□□□ -1.99
USB1Q9BQ65 SNORD88.1-201ENST00000408684 91 ntBASIC2.65□□□□□ -1.99
USB1Q9BQ65 AC015818.7-201ENST00000428754 109 ntBASIC2.65□□□□□ -1.99
USB1Q9BQ65 SUMO1P4-201ENST00000429430 302 ntBASIC2.65□□□□□ -1.99
USB1Q9BQ65 JTBP1-201ENST00000441314 247 ntBASIC2.65□□□□□ -1.99
USB1Q9BQ65 RNU7-106P-201ENST00000459514 67 ntBASIC2.65□□□□□ -1.99
USB1Q9BQ65 RNU7-193P-201ENST00000516723 65 ntBASIC2.65□□□□□ -1.99
USB1Q9BQ65 AC010297.1-201ENST00000623948 149 ntBASIC2.65□□□□□ -1.99
USB1Q9BQ65 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms