Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
EFCAB3Q8N7B9 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
EFCAB3Q8N7B9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.27□□□□□ -1.89
EFCAB3Q8N7B9 RNU6-154P-201ENST00000384306 106 ntBASIC3.27□□□□□ -1.89
EFCAB3Q8N7B9 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.27□□□□□ -1.89
EFCAB3Q8N7B9 MIR2115-201ENST00000516657 100 ntBASIC3.27□□□□□ -1.89
EFCAB3Q8N7B9 SCARNA20.6-201ENST00000517251 106 ntBASIC3.27□□□□□ -1.89
EFCAB3Q8N7B9 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
EFCAB3Q8N7B9 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
EFCAB3Q8N7B9 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
EFCAB3Q8N7B9 AC009487.2-201ENST00000420969 6821 ntBASIC3.26□□□□□ -1.89
EFCAB3Q8N7B9 RNU4-35P-201ENST00000362588 141 ntBASIC3.26□□□□□ -1.89
EFCAB3Q8N7B9 RNU6-340P-201ENST00000364005 107 ntBASIC3.26□□□□□ -1.89
EFCAB3Q8N7B9 RNU6-681P-201ENST00000364012 104 ntBASIC3.26□□□□□ -1.89
EFCAB3Q8N7B9 RNU6-291P-201ENST00000384720 107 ntBASIC3.26□□□□□ -1.89
EFCAB3Q8N7B9 SNORA48.8-201ENST00000391324 134 ntBASIC3.26□□□□□ -1.89
EFCAB3Q8N7B9 AC244636.1-201ENST00000421152 228 ntBASIC3.26□□□□□ -1.89
EFCAB3Q8N7B9 COTL1P1-201ENST00000422309 375 ntBASIC3.26□□□□□ -1.89
EFCAB3Q8N7B9 RPL30P7-201ENST00000479312 323 ntBASIC3.26□□□□□ -1.89
EFCAB3Q8N7B9 MIR4491-201ENST00000581087 68 ntBASIC3.26□□□□□ -1.89
EFCAB3Q8N7B9 MIR4325-201ENST00000583049 90 ntBASIC3.26□□□□□ -1.89
EFCAB3Q8N7B9 AC005520.4-201ENST00000604337 90 ntBASIC3.26□□□□□ -1.89
EFCAB3Q8N7B9 VPS35-212ENST00000640313 141 ntTSL 5 BASIC3.26□□□□□ -1.89
EFCAB3Q8N7B9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
EFCAB3Q8N7B9 Y_RNA.207-201ENST00000364142 106 ntBASIC3.25□□□□□ -1.89
EFCAB3Q8N7B9 Y_RNA.239-201ENST00000364444 113 ntBASIC3.25□□□□□ -1.89
EFCAB3Q8N7B9 SNORD41-201ENST00000386967 70 ntBASIC3.25□□□□□ -1.89
EFCAB3Q8N7B9 RNA5SP270-201ENST00000411361 118 ntBASIC3.25□□□□□ -1.89
EFCAB3Q8N7B9 RPS27P16-201ENST00000425758 201 ntBASIC3.25□□□□□ -1.89
EFCAB3Q8N7B9 SNORA9.3-201ENST00000516383 129 ntBASIC3.25□□□□□ -1.89
EFCAB3Q8N7B9 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC3.25□□□□□ -1.89
EFCAB3Q8N7B9 U4.3-201ENST00000621047 82 ntBASIC3.25□□□□□ -1.89
EFCAB3Q8N7B9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
EFCAB3Q8N7B9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
EFCAB3Q8N7B9 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
EFCAB3Q8N7B9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
EFCAB3Q8N7B9 AC073325.2-201ENST00000339545 159 ntBASIC3.24□□□□□ -1.89
EFCAB3Q8N7B9 RNU6-330P-201ENST00000363015 107 ntBASIC3.24□□□□□ -1.89
EFCAB3Q8N7B9 RNA5SP259-201ENST00000365541 109 ntBASIC3.24□□□□□ -1.89
EFCAB3Q8N7B9 AP004217.1-201ENST00000480579 346 ntBASIC3.24□□□□□ -1.89
EFCAB3Q8N7B9 RNU7-10P-201ENST00000607194 63 ntBASIC3.24□□□□□ -1.89
EFCAB3Q8N7B9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
EFCAB3Q8N7B9 RNA5SP383-201ENST00000362934 120 ntBASIC3.23□□□□□ -1.89
EFCAB3Q8N7B9 Y_RNA.371-201ENST00000365591 113 ntBASIC3.23□□□□□ -1.89
EFCAB3Q8N7B9 MIR519A1-201ENST00000385257 85 ntBASIC3.23□□□□□ -1.89
EFCAB3Q8N7B9 RNU6-205P-201ENST00000390858 107 ntBASIC3.23□□□□□ -1.89
EFCAB3Q8N7B9 SNORD17-201ENST00000390930 237 ntBASIC3.23□□□□□ -1.89
EFCAB3Q8N7B9 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC3.23□□□□□ -1.89
EFCAB3Q8N7B9 AC006386.2-201ENST00000624491 75 ntBASIC3.23□□□□□ -1.89
EFCAB3Q8N7B9 AC012005.1-201ENST00000624575 75 ntBASIC3.23□□□□□ -1.89
EFCAB3Q8N7B9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.23□□□□□ -1.89
EFCAB3Q8N7B9 MIR513A1-201ENST00000385138 129 ntBASIC3.22□□□□□ -1.89
EFCAB3Q8N7B9 RN7SL274P-201ENST00000492268 272 ntBASIC3.22□□□□□ -1.89
EFCAB3Q8N7B9 SNORA25.16-201ENST00000516741 121 ntBASIC3.22□□□□□ -1.89
EFCAB3Q8N7B9 MIR5680-201ENST00000577577 84 ntBASIC3.22□□□□□ -1.89
EFCAB3Q8N7B9 MIR7112-201ENST00000616126 65 ntBASIC3.22□□□□□ -1.89
EFCAB3Q8N7B9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
EFCAB3Q8N7B9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
EFCAB3Q8N7B9 Y_RNA.510-201ENST00000384511 114 ntBASIC3.21□□□□□ -1.9
EFCAB3Q8N7B9 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.21□□□□□ -1.9
EFCAB3Q8N7B9 AC245166.1-201ENST00000521012 253 ntBASIC3.21□□□□□ -1.9
EFCAB3Q8N7B9 MIR3675-201ENST00000583661 73 ntBASIC3.21□□□□□ -1.9
EFCAB3Q8N7B9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
EFCAB3Q8N7B9 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
EFCAB3Q8N7B9 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
EFCAB3Q8N7B9 MIR377-201ENST00000362145 69 ntBASIC3.2□□□□□ -1.9
EFCAB3Q8N7B9 MIR101-2-201ENST00000362195 79 ntBASIC3.2□□□□□ -1.9
EFCAB3Q8N7B9 RNU6-895P-201ENST00000384125 103 ntBASIC3.2□□□□□ -1.9
EFCAB3Q8N7B9 Y_RNA.588-201ENST00000391254 102 ntBASIC3.2□□□□□ -1.9
EFCAB3Q8N7B9 SNORD100-201ENST00000408573 76 ntBASIC3.2□□□□□ -1.9
EFCAB3Q8N7B9 SNORD93-201ENST00000408813 74 ntBASIC3.2□□□□□ -1.9
EFCAB3Q8N7B9 Y_RNA.606-201ENST00000410579 103 ntBASIC3.2□□□□□ -1.9
EFCAB3Q8N7B9 RNU11-2P-201ENST00000516898 142 ntBASIC3.2□□□□□ -1.9
EFCAB3Q8N7B9 IGKV2-26-201ENST00000518305 343 ntBASIC3.2□□□□□ -1.9
EFCAB3Q8N7B9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC3.2□□□□□ -1.9
EFCAB3Q8N7B9 MIR548H5-201ENST00000580314 60 ntBASIC3.2□□□□□ -1.9
EFCAB3Q8N7B9 MIR4658-201ENST00000584344 65 ntBASIC3.2□□□□□ -1.9
EFCAB3Q8N7B9 TRDV1-202ENST00000621643 102 ntBASIC3.2□□□□□ -1.9
EFCAB3Q8N7B9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.2□□□□□ -1.9
EFCAB3Q8N7B9 SNORA25.3-201ENST00000363205 127 ntBASIC3.19□□□□□ -1.9
EFCAB3Q8N7B9 Y_RNA.536-201ENST00000384621 113 ntBASIC3.19□□□□□ -1.9
EFCAB3Q8N7B9 RNU6-630P-201ENST00000391258 106 ntBASIC3.19□□□□□ -1.9
EFCAB3Q8N7B9 RNA5SP450-201ENST00000411206 102 ntBASIC3.19□□□□□ -1.9
EFCAB3Q8N7B9 AL161935.2-201ENST00000414627 60 ntBASIC3.19□□□□□ -1.9
EFCAB3Q8N7B9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.19□□□□□ -1.9
EFCAB3Q8N7B9 RNU7-195P-201ENST00000458793 62 ntBASIC3.19□□□□□ -1.9
EFCAB3Q8N7B9 RN7SL75P-201ENST00000461926 281 ntBASIC3.19□□□□□ -1.9
EFCAB3Q8N7B9 RNU6-922P-201ENST00000516753 99 ntBASIC3.19□□□□□ -1.9
EFCAB3Q8N7B9 EIF4BP1-201ENST00000554881 351 ntBASIC3.19□□□□□ -1.9
EFCAB3Q8N7B9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.19□□□□□ -1.9
EFCAB3Q8N7B9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
EFCAB3Q8N7B9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
EFCAB3Q8N7B9 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
EFCAB3Q8N7B9 SNORA25.4-201ENST00000363666 124 ntBASIC3.18□□□□□ -1.9
EFCAB3Q8N7B9 SNORD56.5-201ENST00000364281 72 ntBASIC3.18□□□□□ -1.9
EFCAB3Q8N7B9 MIR18B-201ENST00000454574 71 ntBASIC3.18□□□□□ -1.9
EFCAB3Q8N7B9 TRAJ51-201ENST00000504127 63 ntBASIC3.18□□□□□ -1.9
EFCAB3Q8N7B9 RNA5SP341-201ENST00000516261 117 ntBASIC3.18□□□□□ -1.9
EFCAB3Q8N7B9 MIR4276-201ENST00000584832 70 ntBASIC3.18□□□□□ -1.9
EFCAB3Q8N7B9 RNA5SP374-201ENST00000362939 125 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 209.5 ms