Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 RNA5SP264-201ENST00000363115 107 ntBASIC1.71□□□□□ -2.14
SYNPOQ8N3V7 SNORD48-201ENST00000364953 64 ntBASIC1.71□□□□□ -2.14
SYNPOQ8N3V7 RNY1P6-201ENST00000384193 109 ntBASIC1.71□□□□□ -2.14
SYNPOQ8N3V7 AC063976.4-201ENST00000421971 163 ntBASIC1.71□□□□□ -2.14
SYNPOQ8N3V7 SNORA31.4-201ENST00000516049 129 ntBASIC1.71□□□□□ -2.14
SYNPOQ8N3V7 SNORD53B-201ENST00000577887 78 ntBASIC1.71□□□□□ -2.14
SYNPOQ8N3V7 MIR3618-201ENST00000580330 88 ntBASIC1.71□□□□□ -2.14
SYNPOQ8N3V7 RNU6-755P-201ENST00000364400 103 ntBASIC1.7□□□□□ -2.14
SYNPOQ8N3V7 SNORD116-21-201ENST00000384507 92 ntBASIC1.7□□□□□ -2.14
SYNPOQ8N3V7 Y_RNA.528-201ENST00000384575 108 ntBASIC1.7□□□□□ -2.14
SYNPOQ8N3V7 RNU6-910P-201ENST00000390844 107 ntBASIC1.7□□□□□ -2.14
SYNPOQ8N3V7 RNA5SP136-201ENST00000410906 107 ntBASIC1.7□□□□□ -2.14
SYNPOQ8N3V7 Y_RNA.649-201ENST00000459077 103 ntBASIC1.7□□□□□ -2.14
SYNPOQ8N3V7 MIR3152-201ENST00000579801 74 ntBASIC1.7□□□□□ -2.14
SYNPOQ8N3V7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SYNPOQ8N3V7 RNA5SP261-201ENST00000410536 106 ntBASIC1.69□□□□□ -2.14
SYNPOQ8N3V7 PDCD5P2-201ENST00000507570 312 ntBASIC1.69□□□□□ -2.14
SYNPOQ8N3V7 AL020996.3-201ENST00000606617 222 ntBASIC1.69□□□□□ -2.14
SYNPOQ8N3V7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.69□□□□□ -2.14
SYNPOQ8N3V7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SYNPOQ8N3V7 RNU6-396P-201ENST00000365369 105 ntBASIC1.68□□□□□ -2.14
SYNPOQ8N3V7 MIR548A1-201ENST00000385041 97 ntBASIC1.68□□□□□ -2.14
SYNPOQ8N3V7 COX6CP6-201ENST00000490840 228 ntBASIC1.68□□□□□ -2.14
SYNPOQ8N3V7 RNY4P20-201ENST00000516678 93 ntBASIC1.68□□□□□ -2.14
SYNPOQ8N3V7 MIR3122-201ENST00000577243 73 ntBASIC1.68□□□□□ -2.14
SYNPOQ8N3V7 MIR7111-201ENST00000619751 72 ntBASIC1.68□□□□□ -2.14
SYNPOQ8N3V7 AC021613.1-201ENST00000623880 111 ntBASIC1.68□□□□□ -2.14
SYNPOQ8N3V7 Y_RNA.508-201ENST00000384502 114 ntBASIC1.67□□□□□ -2.14
SYNPOQ8N3V7 RNU6-880P-201ENST00000384526 107 ntBASIC1.67□□□□□ -2.14
SYNPOQ8N3V7 MIR1185-1-201ENST00000408598 86 ntBASIC1.67□□□□□ -2.14
SYNPOQ8N3V7 RNU6-1054P-201ENST00000411293 104 ntBASIC1.67□□□□□ -2.14
SYNPOQ8N3V7 SNORA70.22-201ENST00000517160 124 ntBASIC1.67□□□□□ -2.14
SYNPOQ8N3V7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.67□□□□□ -2.14
SYNPOQ8N3V7 RNA5SP327-201ENST00000362494 101 ntBASIC1.66□□□□□ -2.14
SYNPOQ8N3V7 RNU6-60P-201ENST00000364792 103 ntBASIC1.66□□□□□ -2.14
SYNPOQ8N3V7 RNU6-392P-201ENST00000364926 101 ntBASIC1.66□□□□□ -2.14
SYNPOQ8N3V7 Y_RNA.298-201ENST00000364960 107 ntBASIC1.66□□□□□ -2.14
SYNPOQ8N3V7 SNORD38B-201ENST00000384690 67 ntBASIC1.66□□□□□ -2.14
SYNPOQ8N3V7 RPS3AP1-201ENST00000413190 320 ntBASIC1.66□□□□□ -2.14
SYNPOQ8N3V7 AC090844.1-201ENST00000422019 156 ntBASIC1.66□□□□□ -2.14
SYNPOQ8N3V7 AC021443.1-201ENST00000604478 211 ntBASIC1.66□□□□□ -2.14
SYNPOQ8N3V7 MIR6717-201ENST00000622747 73 ntBASIC1.66□□□□□ -2.14
SYNPOQ8N3V7 SNORD38B-202ENST00000625943 69 ntBASIC1.66□□□□□ -2.14
SYNPOQ8N3V7 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.66□□□□□ -2.14
SYNPOQ8N3V7 SNORA22-201ENST00000383907 134 ntBASIC1.65□□□□□ -2.15
SYNPOQ8N3V7 MIR517C-201ENST00000385103 95 ntBASIC1.65□□□□□ -2.15
SYNPOQ8N3V7 MIR518E-201ENST00000385252 88 ntBASIC1.65□□□□□ -2.15
SYNPOQ8N3V7 MT-TI-201ENST00000387365 69 ntBASIC1.65□□□□□ -2.15
SYNPOQ8N3V7 RNU7-123P-201ENST00000515911 60 ntBASIC1.65□□□□□ -2.15
SYNPOQ8N3V7 MIR2115-201ENST00000516657 100 ntBASIC1.65□□□□□ -2.15
SYNPOQ8N3V7 AP000753.3-201ENST00000604083 169 ntBASIC1.65□□□□□ -2.15
SYNPOQ8N3V7 PRELID3BP2-201ENST00000605362 201 ntBASIC1.65□□□□□ -2.15
SYNPOQ8N3V7 BX248123.2-201ENST00000606318 124 ntBASIC1.65□□□□□ -2.15
SYNPOQ8N3V7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.15
SYNPOQ8N3V7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
SYNPOQ8N3V7 Y_RNA.198-201ENST00000364013 98 ntBASIC1.64□□□□□ -2.15
SYNPOQ8N3V7 Y_RNA.327-201ENST00000365201 102 ntBASIC1.64□□□□□ -2.15
SYNPOQ8N3V7 SNORA67.6-201ENST00000391093 99 ntBASIC1.64□□□□□ -2.15
SYNPOQ8N3V7 RNU7-164P-201ENST00000459221 62 ntBASIC1.64□□□□□ -2.15
SYNPOQ8N3V7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.64□□□□□ -2.15
SYNPOQ8N3V7 RNU2-35P-201ENST00000516446 142 ntBASIC1.64□□□□□ -2.15
SYNPOQ8N3V7 AC019288.1-201ENST00000557918 224 ntBASIC1.64□□□□□ -2.15
SYNPOQ8N3V7 MIR4305-201ENST00000583252 102 ntBASIC1.64□□□□□ -2.15
SYNPOQ8N3V7 MIR8055-201ENST00000610739 97 ntBASIC1.64□□□□□ -2.15
SYNPOQ8N3V7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
SYNPOQ8N3V7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
SYNPOQ8N3V7 Y_RNA.116-201ENST00000363292 103 ntBASIC1.63□□□□□ -2.15
SYNPOQ8N3V7 Y_RNA.281-201ENST00000364774 94 ntBASIC1.63□□□□□ -2.15
SYNPOQ8N3V7 Y_RNA.355-201ENST00000365462 98 ntBASIC1.63□□□□□ -2.15
SYNPOQ8N3V7 Y_RNA.549-201ENST00000384657 102 ntBASIC1.63□□□□□ -2.15
SYNPOQ8N3V7 RNU6-1104P-201ENST00000384723 104 ntBASIC1.63□□□□□ -2.15
SYNPOQ8N3V7 RNU6-1319P-201ENST00000390855 104 ntBASIC1.63□□□□□ -2.15
SYNPOQ8N3V7 RNU6-205P-201ENST00000390858 107 ntBASIC1.63□□□□□ -2.15
SYNPOQ8N3V7 RNU6-747P-201ENST00000390928 104 ntBASIC1.63□□□□□ -2.15
SYNPOQ8N3V7 RNU6-241P-201ENST00000391148 104 ntBASIC1.63□□□□□ -2.15
SYNPOQ8N3V7 MIR1302-7-201ENST00000408841 72 ntBASIC1.63□□□□□ -2.15
SYNPOQ8N3V7 RNA5SP95-201ENST00000410319 137 ntBASIC1.63□□□□□ -2.15
SYNPOQ8N3V7 RNU6-177P-201ENST00000411257 104 ntBASIC1.63□□□□□ -2.15
SYNPOQ8N3V7 MRPL35P3-201ENST00000421557 364 ntBASIC1.63□□□□□ -2.15
SYNPOQ8N3V7 AL591704.2-201ENST00000421658 181 ntBASIC1.63□□□□□ -2.15
SYNPOQ8N3V7 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.63□□□□□ -2.15
SYNPOQ8N3V7 AC022523.2-201ENST00000561045 150 ntBASIC1.63□□□□□ -2.15
SYNPOQ8N3V7 AC007012.1-201ENST00000567192 175 ntBASIC1.63□□□□□ -2.15
SYNPOQ8N3V7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.63□□□□□ -2.15
SYNPOQ8N3V7 MIR6516-201ENST00000630554 81 ntBASIC1.63□□□□□ -2.15
SYNPOQ8N3V7 MIR26B-201ENST00000362251 77 ntBASIC1.62□□□□□ -2.15
SYNPOQ8N3V7 SNORA22.1-201ENST00000362701 134 ntBASIC1.62□□□□□ -2.15
SYNPOQ8N3V7 RNU1-42P-201ENST00000364033 160 ntBASIC1.62□□□□□ -2.15
SYNPOQ8N3V7 RNU6-654P-201ENST00000364373 107 ntBASIC1.62□□□□□ -2.15
SYNPOQ8N3V7 SNORA75.2-201ENST00000391138 150 ntBASIC1.62□□□□□ -2.15
SYNPOQ8N3V7 SNORA75.3-201ENST00000391231 150 ntBASIC1.62□□□□□ -2.15
SYNPOQ8N3V7 RNA5SP144-201ENST00000410846 116 ntBASIC1.62□□□□□ -2.15
SYNPOQ8N3V7 AL645939.4-201ENST00000604495 135 ntBASIC1.62□□□□□ -2.15
SYNPOQ8N3V7 AL035470.1-201ENST00000622571 220 ntBASIC1.62□□□□□ -2.15
SYNPOQ8N3V7 Z97988.1-201ENST00000637697 135 ntBASIC1.62□□□□□ -2.15
SYNPOQ8N3V7 Y_RNA.354-201ENST00000365448 111 ntBASIC1.61□□□□□ -2.15
SYNPOQ8N3V7 Y_RNA.363-201ENST00000365529 113 ntBASIC1.61□□□□□ -2.15
SYNPOQ8N3V7 RNU6-147P-201ENST00000383983 107 ntBASIC1.61□□□□□ -2.15
SYNPOQ8N3V7 SNORA80D-201ENST00000384488 135 ntBASIC1.61□□□□□ -2.15
SYNPOQ8N3V7 SNORA2B-201ENST00000384583 137 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms