Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 MIR643-201ENST00000385267 97 ntBASIC-0.07□□□□□ -2.42
CCDC50Q8IVM0 RNU6-127P-201ENST00000390897 107 ntBASIC-0.07□□□□□ -2.42
CCDC50Q8IVM0 AC022028.1-201ENST00000412054 408 ntBASIC-0.07□□□□□ -2.42
CCDC50Q8IVM0 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.07□□□□□ -2.42
CCDC50Q8IVM0 RNU6-765P-201ENST00000516916 99 ntBASIC-0.07□□□□□ -2.42
CCDC50Q8IVM0 AC023932.2-201ENST00000603176 175 ntBASIC-0.07□□□□□ -2.42
CCDC50Q8IVM0 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.07□□□□□ -2.42
CCDC50Q8IVM0 AC021613.1-201ENST00000623880 111 ntBASIC-0.07□□□□□ -2.42
CCDC50Q8IVM0 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.08□□□□□ -2.42
CCDC50Q8IVM0 MIR411-201ENST00000362239 96 ntBASIC-0.08□□□□□ -2.42
CCDC50Q8IVM0 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.08□□□□□ -2.42
CCDC50Q8IVM0 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.08□□□□□ -2.42
CCDC50Q8IVM0 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.08□□□□□ -2.42
CCDC50Q8IVM0 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.08□□□□□ -2.42
CCDC50Q8IVM0 RNY1P13-201ENST00000365030 105 ntBASIC-0.08□□□□□ -2.42
CCDC50Q8IVM0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
CCDC50Q8IVM0 SNORD2.1-201ENST00000458762 69 ntBASIC-0.08□□□□□ -2.42
CCDC50Q8IVM0 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.08□□□□□ -2.42
CCDC50Q8IVM0 AL442663.2-201ENST00000554385 511 ntBASIC-0.08□□□□□ -2.42
CCDC50Q8IVM0 AC244669.1-204ENST00000621564 178 ntBASIC-0.08□□□□□ -2.42
CCDC50Q8IVM0 RNA5SP245-201ENST00000364239 121 ntBASIC-0.09□□□□□ -2.42
CCDC50Q8IVM0 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.09□□□□□ -2.42
CCDC50Q8IVM0 RNU4-16P-201ENST00000364737 141 ntBASIC-0.09□□□□□ -2.42
CCDC50Q8IVM0 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.09□□□□□ -2.42
CCDC50Q8IVM0 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.09□□□□□ -2.42
CCDC50Q8IVM0 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.09□□□□□ -2.42
CCDC50Q8IVM0 SNORA20-201ENST00000384662 132 ntBASIC-0.09□□□□□ -2.42
CCDC50Q8IVM0 MIR760-201ENST00000390220 80 ntBASIC-0.09□□□□□ -2.42
CCDC50Q8IVM0 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.09□□□□□ -2.42
CCDC50Q8IVM0 SNORA62.5-201ENST00000516634 120 ntBASIC-0.09□□□□□ -2.42
CCDC50Q8IVM0 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.09□□□□□ -2.42
CCDC50Q8IVM0 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.09□□□□□ -2.42
CCDC50Q8IVM0 AC091304.10-201ENST00000641554 121 ntBASIC-0.09□□□□□ -2.42
CCDC50Q8IVM0 RNU6-381P-201ENST00000391259 108 ntBASIC-0.1□□□□□ -2.43
CCDC50Q8IVM0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.1□□□□□ -2.43
CCDC50Q8IVM0 AL365265.1-201ENST00000621045 234 ntBASIC-0.1□□□□□ -2.43
CCDC50Q8IVM0 AC134503.1-201ENST00000633048 54 ntBASIC-0.1□□□□□ -2.43
CCDC50Q8IVM0 MIR499B-201ENST00000636498 73 ntBASIC-0.1□□□□□ -2.43
CCDC50Q8IVM0 MTND5P32-201ENST00000560711 1802 ntBASIC-0.1□□□□□ -2.43
CCDC50Q8IVM0 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.11□□□□□ -2.43
CCDC50Q8IVM0 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.11□□□□□ -2.43
CCDC50Q8IVM0 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.11□□□□□ -2.43
CCDC50Q8IVM0 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.11□□□□□ -2.43
CCDC50Q8IVM0 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
CCDC50Q8IVM0 MIR548P-201ENST00000408336 84 ntBASIC-0.11□□□□□ -2.43
CCDC50Q8IVM0 AC113618.1-201ENST00000416747 285 ntBASIC-0.11□□□□□ -2.43
CCDC50Q8IVM0 MIR3171-201ENST00000584270 74 ntBASIC-0.11□□□□□ -2.43
CCDC50Q8IVM0 MIR4639-201ENST00000584938 69 ntBASIC-0.11□□□□□ -2.43
CCDC50Q8IVM0 SNORA63.5-201ENST00000363548 123 ntBASIC-0.12□□□□□ -2.43
CCDC50Q8IVM0 RNA5SP325-201ENST00000363756 130 ntBASIC-0.12□□□□□ -2.43
CCDC50Q8IVM0 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.12□□□□□ -2.43
CCDC50Q8IVM0 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.12□□□□□ -2.43
CCDC50Q8IVM0 MIR593-201ENST00000384856 100 ntBASIC-0.12□□□□□ -2.43
CCDC50Q8IVM0 AL358176.2-201ENST00000425769 204 ntBASIC-0.12□□□□□ -2.43
CCDC50Q8IVM0 MTATP6P23-201ENST00000440153 476 ntBASIC-0.12□□□□□ -2.43
CCDC50Q8IVM0 RNU6-531P-201ENST00000516694 104 ntBASIC-0.12□□□□□ -2.43
CCDC50Q8IVM0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.12□□□□□ -2.43
CCDC50Q8IVM0 MIR4290-201ENST00000583807 95 ntBASIC-0.12□□□□□ -2.43
CCDC50Q8IVM0 AL365205.2-201ENST00000594586 68 ntBASIC-0.12□□□□□ -2.43
CCDC50Q8IVM0 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.13□□□□□ -2.43
CCDC50Q8IVM0 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.13□□□□□ -2.43
CCDC50Q8IVM0 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.13□□□□□ -2.43
CCDC50Q8IVM0 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.13□□□□□ -2.43
CCDC50Q8IVM0 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.13□□□□□ -2.43
CCDC50Q8IVM0 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.13□□□□□ -2.43
CCDC50Q8IVM0 RNU6-716P-201ENST00000365621 103 ntBASIC-0.13□□□□□ -2.43
CCDC50Q8IVM0 SNORA2A-201ENST00000383885 135 ntBASIC-0.13□□□□□ -2.43
CCDC50Q8IVM0 MIR193B-201ENST00000384907 83 ntBASIC-0.13□□□□□ -2.43
CCDC50Q8IVM0 MIR145-201ENST00000384967 88 ntBASIC-0.13□□□□□ -2.43
CCDC50Q8IVM0 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.13□□□□□ -2.43
CCDC50Q8IVM0 RNU6-135P-201ENST00000516769 101 ntBASIC-0.13□□□□□ -2.43
CCDC50Q8IVM0 RNU7-70P-201ENST00000516941 66 ntBASIC-0.13□□□□□ -2.43
CCDC50Q8IVM0 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.13□□□□□ -2.43
CCDC50Q8IVM0 AC020661.2-201ENST00000560114 134 ntBASIC-0.13□□□□□ -2.43
CCDC50Q8IVM0 MIR4768-201ENST00000585270 74 ntBASIC-0.13□□□□□ -2.43
CCDC50Q8IVM0 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.13□□□□□ -2.43
CCDC50Q8IVM0 RNU1-29P-201ENST00000606574 126 ntBASIC-0.13□□□□□ -2.43
CCDC50Q8IVM0 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.13□□□□□ -2.43
CCDC50Q8IVM0 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.14□□□□□ -2.43
CCDC50Q8IVM0 RNA5SP128-201ENST00000365305 116 ntBASIC-0.14□□□□□ -2.43
CCDC50Q8IVM0 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.14□□□□□ -2.43
CCDC50Q8IVM0 MIR548H2-201ENST00000408874 88 ntBASIC-0.14□□□□□ -2.43
CCDC50Q8IVM0 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.14□□□□□ -2.43
CCDC50Q8IVM0 TRBVB-201ENST00000477100 408 ntBASIC-0.14□□□□□ -2.43
CCDC50Q8IVM0 RPL39P34-201ENST00000477141 156 ntBASIC-0.14□□□□□ -2.43
CCDC50Q8IVM0 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.14□□□□□ -2.43
CCDC50Q8IVM0 SCARNA15-202ENST00000516881 127 ntBASIC-0.14□□□□□ -2.43
CCDC50Q8IVM0 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.14□□□□□ -2.43
CCDC50Q8IVM0 RNU6-728P-201ENST00000365375 104 ntBASIC-0.15□□□□□ -2.43
CCDC50Q8IVM0 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.15□□□□□ -2.43
CCDC50Q8IVM0 MIR610-201ENST00000385139 96 ntBASIC-0.15□□□□□ -2.43
CCDC50Q8IVM0 SNORA79-201ENST00000408376 140 ntBASIC-0.15□□□□□ -2.43
CCDC50Q8IVM0 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.15□□□□□ -2.43
CCDC50Q8IVM0 RNU7-79P-201ENST00000516082 62 ntBASIC-0.15□□□□□ -2.43
CCDC50Q8IVM0 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.15□□□□□ -2.43
CCDC50Q8IVM0 DEFB131E-201ENST00000532329 154 ntBASIC-0.15□□□□□ -2.43
CCDC50Q8IVM0 U2.14-201ENST00000615943 113 ntBASIC-0.15□□□□□ -2.43
CCDC50Q8IVM0 MIR489-201ENST00000384923 84 ntBASIC-0.16□□□□□ -2.44
CCDC50Q8IVM0 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.16□□□□□ -2.44
CCDC50Q8IVM0 AC108059.2-201ENST00000434626 151 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 191 ms