Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 snoU13.2-201ENST00000459201 104 ntBASIC1.06□□□□□ -2.24
SYNE3Q6ZMZ3 RNU7-45P-201ENST00000459460 63 ntBASIC1.06□□□□□ -2.24
SYNE3Q6ZMZ3 AC112693.2-201ENST00000556538 232 ntBASIC1.06□□□□□ -2.24
SYNE3Q6ZMZ3 AL078603.1-201ENST00000603824 313 ntBASIC1.06□□□□□ -2.24
SYNE3Q6ZMZ3 MIR6857-201ENST00000613267 93 ntBASIC1.06□□□□□ -2.24
SYNE3Q6ZMZ3 MIR6740-201ENST00000618268 113 ntBASIC1.06□□□□□ -2.24
SYNE3Q6ZMZ3 RNU6-369P-201ENST00000362515 102 ntBASIC1.05□□□□□ -2.24
SYNE3Q6ZMZ3 Y_RNA.355-201ENST00000365462 98 ntBASIC1.05□□□□□ -2.24
SYNE3Q6ZMZ3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.05□□□□□ -2.24
SYNE3Q6ZMZ3 RNU6-113P-201ENST00000516653 101 ntBASIC1.05□□□□□ -2.24
SYNE3Q6ZMZ3 MIR3152-201ENST00000579801 74 ntBASIC1.05□□□□□ -2.24
SYNE3Q6ZMZ3 RNU4-11P-201ENST00000365287 132 ntBASIC1.04□□□□□ -2.24
SYNE3Q6ZMZ3 RNU6-804P-201ENST00000384286 107 ntBASIC1.04□□□□□ -2.24
SYNE3Q6ZMZ3 RNU6-205P-201ENST00000390858 107 ntBASIC1.04□□□□□ -2.24
SYNE3Q6ZMZ3 Y_RNA.584-201ENST00000391090 114 ntBASIC1.04□□□□□ -2.24
SYNE3Q6ZMZ3 AL603914.1-201ENST00000401964 204 ntBASIC1.04□□□□□ -2.24
SYNE3Q6ZMZ3 MIR1827-201ENST00000408549 66 ntBASIC1.04□□□□□ -2.24
SYNE3Q6ZMZ3 POLR2J4-204ENST00000418424 324 ntBASIC1.04□□□□□ -2.24
SYNE3Q6ZMZ3 MTATP6P21-201ENST00000440681 189 ntBASIC1.04□□□□□ -2.24
SYNE3Q6ZMZ3 RNU6-893P-201ENST00000458841 100 ntBASIC1.04□□□□□ -2.24
SYNE3Q6ZMZ3 RNU7-62P-201ENST00000458856 62 ntBASIC1.04□□□□□ -2.24
SYNE3Q6ZMZ3 snoU13.18-201ENST00000459483 104 ntBASIC1.04□□□□□ -2.24
SYNE3Q6ZMZ3 RNA5SP220-201ENST00000516298 104 ntBASIC1.04□□□□□ -2.24
SYNE3Q6ZMZ3 RNA5SP255-201ENST00000516370 107 ntBASIC1.04□□□□□ -2.24
SYNE3Q6ZMZ3 RNU6-94P-201ENST00000607728 107 ntBASIC1.04□□□□□ -2.24
SYNE3Q6ZMZ3 SNORA22.1-201ENST00000362701 134 ntBASIC1.03□□□□□ -2.24
SYNE3Q6ZMZ3 Y_RNA.118-201ENST00000363300 101 ntBASIC1.03□□□□□ -2.24
SYNE3Q6ZMZ3 SNORD114-22-201ENST00000365423 72 ntBASIC1.03□□□□□ -2.24
SYNE3Q6ZMZ3 SNORD116-18-201ENST00000383961 92 ntBASIC1.03□□□□□ -2.24
SYNE3Q6ZMZ3 RNU6-42P-201ENST00000384165 107 ntBASIC1.03□□□□□ -2.24
SYNE3Q6ZMZ3 SNORA20-201ENST00000384662 132 ntBASIC1.03□□□□□ -2.24
SYNE3Q6ZMZ3 SNORD37.2-201ENST00000391075 66 ntBASIC1.03□□□□□ -2.24
SYNE3Q6ZMZ3 RNU6-1110P-201ENST00000516462 101 ntBASIC1.03□□□□□ -2.24
SYNE3Q6ZMZ3 uc_338.6-201ENST00000613544 171 ntBASIC1.03□□□□□ -2.24
SYNE3Q6ZMZ3 RNU6-151P-201ENST00000364158 107 ntBASIC1.02□□□□□ -2.25
SYNE3Q6ZMZ3 Y_RNA.398-201ENST00000383952 99 ntBASIC1.02□□□□□ -2.25
SYNE3Q6ZMZ3 RNA5SP144-201ENST00000410846 116 ntBASIC1.02□□□□□ -2.25
SYNE3Q6ZMZ3 MIR18B-201ENST00000454574 71 ntBASIC1.02□□□□□ -2.25
SYNE3Q6ZMZ3 U7.7-201ENST00000459276 60 ntBASIC1.02□□□□□ -2.25
SYNE3Q6ZMZ3 Y_RNA.651-201ENST00000459380 103 ntBASIC1.02□□□□□ -2.25
SYNE3Q6ZMZ3 MIR4661-201ENST00000582720 75 ntBASIC1.02□□□□□ -2.25
SYNE3Q6ZMZ3 AC104465.1-201ENST00000611365 139 ntBASIC1.02□□□□□ -2.25
SYNE3Q6ZMZ3 MIR373-201ENST00000362273 69 ntBASIC1.01□□□□□ -2.25
SYNE3Q6ZMZ3 Y_RNA.400-201ENST00000383963 111 ntBASIC1.01□□□□□ -2.25
SYNE3Q6ZMZ3 MIR588-201ENST00000384900 83 ntBASIC1.01□□□□□ -2.25
SYNE3Q6ZMZ3 MIR942-201ENST00000401111 86 ntBASIC1.01□□□□□ -2.25
SYNE3Q6ZMZ3 RNU6-1165P-201ENST00000410119 107 ntBASIC1.01□□□□□ -2.25
SYNE3Q6ZMZ3 Y_RNA.757-201ENST00000578934 114 ntBASIC1.01□□□□□ -2.25
SYNE3Q6ZMZ3 MIR30D-201ENST00000362283 70 ntBASIC1□□□□□ -2.25
SYNE3Q6ZMZ3 SNORD12C-201ENST00000386307 89 ntBASIC1□□□□□ -2.25
SYNE3Q6ZMZ3 MT-TF-201ENST00000387314 71 ntBASIC1□□□□□ -2.25
SYNE3Q6ZMZ3 snoU13.21-201ENST00000459368 105 ntBASIC1□□□□□ -2.25
SYNE3Q6ZMZ3 PDCD5P2-201ENST00000507570 312 ntBASIC1□□□□□ -2.25
SYNE3Q6ZMZ3 SNORD115-2-201ENST00000362842 82 ntBASIC0.99□□□□□ -2.25
SYNE3Q6ZMZ3 SNORD115-20-201ENST00000365099 82 ntBASIC0.99□□□□□ -2.25
SYNE3Q6ZMZ3 RNY1P5-201ENST00000383890 115 ntBASIC0.99□□□□□ -2.25
SYNE3Q6ZMZ3 MTND5P41-201ENST00000517498 206 ntBASIC0.99□□□□□ -2.25
SYNE3Q6ZMZ3 MIR4698-201ENST00000577795 80 ntBASIC0.99□□□□□ -2.25
SYNE3Q6ZMZ3 MIR3973-201ENST00000579824 107 ntBASIC0.99□□□□□ -2.25
SYNE3Q6ZMZ3 SNORA4-201ENST00000584302 138 ntBASIC0.99□□□□□ -2.25
SYNE3Q6ZMZ3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.99□□□□□ -2.25
SYNE3Q6ZMZ3 MIR6734-201ENST00000621166 68 ntBASIC0.99□□□□□ -2.25
SYNE3Q6ZMZ3 AP001340.1-201ENST00000624405 217 ntBASIC0.99□□□□□ -2.25
SYNE3Q6ZMZ3 AC021753.1-201ENST00000635724 168 ntBASIC0.99□□□□□ -2.25
SYNE3Q6ZMZ3 Y_RNA.170-201ENST00000363746 110 ntBASIC0.98□□□□□ -2.25
SYNE3Q6ZMZ3 SNORD114-2-201ENST00000363953 78 ntBASIC0.98□□□□□ -2.25
SYNE3Q6ZMZ3 RNU4-16P-201ENST00000364737 141 ntBASIC0.98□□□□□ -2.25
SYNE3Q6ZMZ3 RNU1-36P-201ENST00000365130 165 ntBASIC0.98□□□□□ -2.25
SYNE3Q6ZMZ3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.98□□□□□ -2.25
SYNE3Q6ZMZ3 RNU6-994P-201ENST00000410507 111 ntBASIC0.98□□□□□ -2.25
SYNE3Q6ZMZ3 RPS26P5-201ENST00000418544 335 ntBASIC0.98□□□□□ -2.25
SYNE3Q6ZMZ3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.98□□□□□ -2.25
SYNE3Q6ZMZ3 Y_RNA.686-201ENST00000516548 134 ntBASIC0.98□□□□□ -2.25
SYNE3Q6ZMZ3 RNU6-1258P-201ENST00000516911 111 ntBASIC0.98□□□□□ -2.25
SYNE3Q6ZMZ3 MIR548X2-201ENST00000579776 100 ntBASIC0.98□□□□□ -2.25
SYNE3Q6ZMZ3 FAM71BP1-201ENST00000604431 523 ntBASIC0.98□□□□□ -2.25
SYNE3Q6ZMZ3 AL662814.1-201ENST00000617364 121 ntBASIC0.98□□□□□ -2.25
SYNE3Q6ZMZ3 Y_RNA.215-201ENST00000364204 112 ntBASIC0.97□□□□□ -2.25
SYNE3Q6ZMZ3 MIR569-201ENST00000385228 96 ntBASIC0.97□□□□□ -2.25
SYNE3Q6ZMZ3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.97□□□□□ -2.25
SYNE3Q6ZMZ3 AC067940.1-201ENST00000458411 300 ntBASIC0.97□□□□□ -2.25
SYNE3Q6ZMZ3 RNU7-200P-201ENST00000516105 62 ntBASIC0.97□□□□□ -2.25
SYNE3Q6ZMZ3 AL136317.1-201ENST00000612653 226 ntBASIC0.97□□□□□ -2.25
SYNE3Q6ZMZ3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SYNE3Q6ZMZ3 AC010332.2-201ENST00000613083 1904 ntBASIC0.96□□□□□ -2.26
SYNE3Q6ZMZ3 Y_RNA.280-201ENST00000364765 112 ntBASIC0.96□□□□□ -2.26
SYNE3Q6ZMZ3 RNU6-934P-201ENST00000365154 107 ntBASIC0.96□□□□□ -2.26
SYNE3Q6ZMZ3 RNU6-690P-201ENST00000365242 106 ntBASIC0.96□□□□□ -2.26
SYNE3Q6ZMZ3 AC113410.1-201ENST00000505029 247 ntBASIC0.96□□□□□ -2.26
SYNE3Q6ZMZ3 Y_RNA.690-201ENST00000516603 95 ntBASIC0.96□□□□□ -2.26
SYNE3Q6ZMZ3 RNU6-255P-201ENST00000516957 105 ntBASIC0.96□□□□□ -2.26
SYNE3Q6ZMZ3 AC025627.3-201ENST00000582078 182 ntBASIC0.96□□□□□ -2.26
SYNE3Q6ZMZ3 MIR4305-201ENST00000583252 102 ntBASIC0.96□□□□□ -2.26
SYNE3Q6ZMZ3 MIR7111-201ENST00000619751 72 ntBASIC0.96□□□□□ -2.26
SYNE3Q6ZMZ3 SNORD18B-201ENST00000365659 72 ntBASIC0.95□□□□□ -2.26
SYNE3Q6ZMZ3 MIR513C-201ENST00000401352 84 ntBASIC0.95□□□□□ -2.26
SYNE3Q6ZMZ3 SNORD83.1-201ENST00000411362 77 ntBASIC0.95□□□□□ -2.26
SYNE3Q6ZMZ3 RNU6-351P-201ENST00000516097 100 ntBASIC0.95□□□□□ -2.26
SYNE3Q6ZMZ3 AC013244.2-201ENST00000603396 103 ntBASIC0.95□□□□□ -2.26
SYNE3Q6ZMZ3 AC211469.2-201ENST00000605461 205 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 245 ms