Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 AC009474.2-201ENST00000451383 136 ntBASIC1.26□□□□□ -2.21
ERVFC1-1P60608 RNU6-893P-201ENST00000458841 100 ntBASIC1.26□□□□□ -2.21
ERVFC1-1P60608 Y_RNA.773-201ENST00000607168 90 ntBASIC1.26□□□□□ -2.21
ERVFC1-1P60608 RNU6-94P-201ENST00000607728 107 ntBASIC1.26□□□□□ -2.21
ERVFC1-1P60608 MIR8063-201ENST00000621930 81 ntBASIC1.26□□□□□ -2.21
ERVFC1-1P60608 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.25□□□□□ -2.21
ERVFC1-1P60608 U8.6-201ENST00000364939 135 ntBASIC1.25□□□□□ -2.21
ERVFC1-1P60608 SNORD1A-201ENST00000364968 72 ntBASIC1.25□□□□□ -2.21
ERVFC1-1P60608 RNU6-1014P-201ENST00000383940 103 ntBASIC1.25□□□□□ -2.21
ERVFC1-1P60608 MIR1302-7-201ENST00000408841 72 ntBASIC1.25□□□□□ -2.21
ERVFC1-1P60608 RNU4-69P-201ENST00000410677 143 ntBASIC1.25□□□□□ -2.21
ERVFC1-1P60608 RPL39P34-201ENST00000477141 156 ntBASIC1.25□□□□□ -2.21
ERVFC1-1P60608 RNA5SP33-201ENST00000516687 98 ntBASIC1.25□□□□□ -2.21
ERVFC1-1P60608 AC068339.1-201ENST00000526965 141 ntBASIC1.25□□□□□ -2.21
ERVFC1-1P60608 GHRLOS.1-201ENST00000610995 70 ntBASIC1.25□□□□□ -2.21
ERVFC1-1P60608 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
ERVFC1-1P60608 MIR1255B1-201ENST00000636325 63 ntBASIC1.25□□□□□ -2.21
ERVFC1-1P60608 WWP1P1-201ENST00000466609 2769 ntBASIC1.25□□□□□ -2.21
ERVFC1-1P60608 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
ERVFC1-1P60608 SNORD115-19-201ENST00000363098 82 ntBASIC1.24□□□□□ -2.21
ERVFC1-1P60608 SNORD115-18-201ENST00000363293 82 ntBASIC1.24□□□□□ -2.21
ERVFC1-1P60608 Y_RNA.163-201ENST00000363702 113 ntBASIC1.24□□□□□ -2.21
ERVFC1-1P60608 SNORD115-17-201ENST00000364612 82 ntBASIC1.24□□□□□ -2.21
ERVFC1-1P60608 RNU6-342P-201ENST00000384521 104 ntBASIC1.24□□□□□ -2.21
ERVFC1-1P60608 snoU13.9-201ENST00000458927 103 ntBASIC1.24□□□□□ -2.21
ERVFC1-1P60608 RNA5SP445-201ENST00000515889 115 ntBASIC1.24□□□□□ -2.21
ERVFC1-1P60608 MIR5009-201ENST00000578736 100 ntBASIC1.24□□□□□ -2.21
ERVFC1-1P60608 AP000942.3-201ENST00000603702 160 ntBASIC1.24□□□□□ -2.21
ERVFC1-1P60608 AC084768.2-201ENST00000622736 221 ntBASIC1.24□□□□□ -2.21
ERVFC1-1P60608 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
ERVFC1-1P60608 AL161722.3-201ENST00000605789 2983 ntBASIC1.23□□□□□ -2.21
ERVFC1-1P60608 Y_RNA.49-201ENST00000362714 112 ntBASIC1.23□□□□□ -2.21
ERVFC1-1P60608 RNA5SP48-201ENST00000363969 126 ntBASIC1.23□□□□□ -2.21
ERVFC1-1P60608 Y_RNA.299-201ENST00000364973 94 ntBASIC1.23□□□□□ -2.21
ERVFC1-1P60608 AL031737.1-201ENST00000450125 223 ntBASIC1.23□□□□□ -2.21
ERVFC1-1P60608 RPS29P11-201ENST00000496507 171 ntBASIC1.23□□□□□ -2.21
ERVFC1-1P60608 AC019176.1-201ENST00000518519 225 ntBASIC1.23□□□□□ -2.21
ERVFC1-1P60608 AL357312.1-201ENST00000603879 298 ntBASIC1.23□□□□□ -2.21
ERVFC1-1P60608 MIR502-201ENST00000606349 86 ntBASIC1.23□□□□□ -2.21
ERVFC1-1P60608 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
ERVFC1-1P60608 AL162726.3-218ENST00000636401 95 ntBASIC1.23□□□□□ -2.21
ERVFC1-1P60608 SNORA25.3-201ENST00000363205 127 ntBASIC1.22□□□□□ -2.21
ERVFC1-1P60608 Y_RNA.328-201ENST00000365208 113 ntBASIC1.22□□□□□ -2.21
ERVFC1-1P60608 SNORA32-201ENST00000384072 121 ntBASIC1.22□□□□□ -2.21
ERVFC1-1P60608 AC003989.2-201ENST00000440224 169 ntBASIC1.22□□□□□ -2.21
ERVFC1-1P60608 AC245047.7-201ENST00000440265 293 ntBASIC1.22□□□□□ -2.21
ERVFC1-1P60608 AP003716.2-201ENST00000528260 108 ntBASIC1.22□□□□□ -2.21
ERVFC1-1P60608 CYP3A52P-201ENST00000563326 91 ntBASIC1.22□□□□□ -2.21
ERVFC1-1P60608 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.22□□□□□ -2.21
ERVFC1-1P60608 PRELID3BP2-201ENST00000605362 201 ntBASIC1.22□□□□□ -2.21
ERVFC1-1P60608 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
ERVFC1-1P60608 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
ERVFC1-1P60608 RNU1-17P-201ENST00000363022 152 ntBASIC1.21□□□□□ -2.22
ERVFC1-1P60608 RNU1-42P-201ENST00000364033 160 ntBASIC1.21□□□□□ -2.22
ERVFC1-1P60608 Y_RNA.309-201ENST00000365046 111 ntBASIC1.21□□□□□ -2.22
ERVFC1-1P60608 RNU6-616P-201ENST00000384353 107 ntBASIC1.21□□□□□ -2.22
ERVFC1-1P60608 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.21□□□□□ -2.22
ERVFC1-1P60608 RNU6-816P-201ENST00000390914 107 ntBASIC1.21□□□□□ -2.22
ERVFC1-1P60608 RNU6-1268P-201ENST00000391214 107 ntBASIC1.21□□□□□ -2.22
ERVFC1-1P60608 RNU6-1239P-201ENST00000391310 107 ntBASIC1.21□□□□□ -2.22
ERVFC1-1P60608 RNA5SP89-201ENST00000410300 108 ntBASIC1.21□□□□□ -2.22
ERVFC1-1P60608 SNORA19.1-201ENST00000410656 129 ntBASIC1.21□□□□□ -2.22
ERVFC1-1P60608 AC244023.1-201ENST00000426884 112 ntBASIC1.21□□□□□ -2.22
ERVFC1-1P60608 AL353813.1-201ENST00000440700 253 ntBASIC1.21□□□□□ -2.22
ERVFC1-1P60608 AC027119.1-201ENST00000440877 241 ntBASIC1.21□□□□□ -2.22
ERVFC1-1P60608 AC079140.2-201ENST00000506193 142 ntBASIC1.21□□□□□ -2.22
ERVFC1-1P60608 AC108729.3-201ENST00000513484 108 ntBASIC1.21□□□□□ -2.22
ERVFC1-1P60608 RNU6-947P-201ENST00000516264 106 ntBASIC1.21□□□□□ -2.22
ERVFC1-1P60608 RNU6-165P-201ENST00000517170 99 ntBASIC1.21□□□□□ -2.22
ERVFC1-1P60608 AC242498.1-201ENST00000604134 111 ntBASIC1.21□□□□□ -2.22
ERVFC1-1P60608 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.21□□□□□ -2.22
ERVFC1-1P60608 RNU6-1298P-201ENST00000362456 101 ntBASIC1.2□□□□□ -2.22
ERVFC1-1P60608 RNU6-766P-201ENST00000362478 107 ntBASIC1.2□□□□□ -2.22
ERVFC1-1P60608 RNA5SP190-201ENST00000365222 118 ntBASIC1.2□□□□□ -2.22
ERVFC1-1P60608 Y_RNA.338-201ENST00000365320 114 ntBASIC1.2□□□□□ -2.22
ERVFC1-1P60608 RNU6-756P-201ENST00000383997 107 ntBASIC1.2□□□□□ -2.22
ERVFC1-1P60608 SNORA18-201ENST00000384416 132 ntBASIC1.2□□□□□ -2.22
ERVFC1-1P60608 Y_RNA.495-201ENST00000384435 112 ntBASIC1.2□□□□□ -2.22
ERVFC1-1P60608 SNORD38B-201ENST00000384690 67 ntBASIC1.2□□□□□ -2.22
ERVFC1-1P60608 MIR150-201ENST00000385048 84 ntBASIC1.2□□□□□ -2.22
ERVFC1-1P60608 MIR320A-201ENST00000385302 82 ntBASIC1.2□□□□□ -2.22
ERVFC1-1P60608 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.2□□□□□ -2.22
ERVFC1-1P60608 RPL39P25-201ENST00000449384 154 ntBASIC1.2□□□□□ -2.22
ERVFC1-1P60608 RNU6-168P-201ENST00000516189 101 ntBASIC1.2□□□□□ -2.22
ERVFC1-1P60608 RNU7-35P-201ENST00000517174 62 ntBASIC1.2□□□□□ -2.22
ERVFC1-1P60608 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.2□□□□□ -2.22
ERVFC1-1P60608 SNORD38B-202ENST00000625943 69 ntBASIC1.2□□□□□ -2.22
ERVFC1-1P60608 RNU6-363P-201ENST00000362895 105 ntBASIC1.19□□□□□ -2.22
ERVFC1-1P60608 Y_RNA.354-201ENST00000365448 111 ntBASIC1.19□□□□□ -2.22
ERVFC1-1P60608 SNORA51.5-201ENST00000384126 131 ntBASIC1.19□□□□□ -2.22
ERVFC1-1P60608 MIR9-3-201ENST00000385084 90 ntBASIC1.19□□□□□ -2.22
ERVFC1-1P60608 MIR1302-5-201ENST00000408164 150 ntBASIC1.19□□□□□ -2.22
ERVFC1-1P60608 MIR1185-1-201ENST00000408598 86 ntBASIC1.19□□□□□ -2.22
ERVFC1-1P60608 MIR1912-201ENST00000410389 80 ntBASIC1.19□□□□□ -2.22
ERVFC1-1P60608 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.19□□□□□ -2.22
ERVFC1-1P60608 RPS27P16-201ENST00000425758 201 ntBASIC1.19□□□□□ -2.22
ERVFC1-1P60608 RNU6-537P-201ENST00000517277 103 ntBASIC1.19□□□□□ -2.22
ERVFC1-1P60608 MIR3664-201ENST00000579074 99 ntBASIC1.19□□□□□ -2.22
ERVFC1-1P60608 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.19□□□□□ -2.22
ERVFC1-1P60608 RNU4-67P-201ENST00000364569 141 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms