Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
ATXN1P54253 ICE2P2-201ENST00000483823 2787 ntBASIC2.1□□□□□ -2.07
ATXN1P54253 Y_RNA.205-201ENST00000364128 113 ntBASIC2.09□□□□□ -2.07
ATXN1P54253 RNU6-1019P-201ENST00000364424 107 ntBASIC2.09□□□□□ -2.07
ATXN1P54253 SNORD45B-201ENST00000364617 72 ntBASIC2.09□□□□□ -2.07
ATXN1P54253 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.09□□□□□ -2.07
ATXN1P54253 HMGN2P38-201ENST00000423806 265 ntBASIC2.09□□□□□ -2.07
ATXN1P54253 AC023449.1-201ENST00000454464 154 ntBASIC2.09□□□□□ -2.07
ATXN1P54253 AC079804.2-201ENST00000490376 200 ntBASIC2.09□□□□□ -2.07
ATXN1P54253 UBL5P1-201ENST00000507979 193 ntBASIC2.09□□□□□ -2.07
ATXN1P54253 RNU6-1015P-201ENST00000517121 99 ntBASIC2.09□□□□□ -2.07
ATXN1P54253 JPX_2.1-201ENST00000614161 69 ntBASIC2.09□□□□□ -2.07
ATXN1P54253 RNU6-661P-201ENST00000362409 107 ntBASIC2.08□□□□□ -2.08
ATXN1P54253 SNORD116-10-201ENST00000363791 102 ntBASIC2.08□□□□□ -2.08
ATXN1P54253 RNU6-1163P-201ENST00000364516 107 ntBASIC2.08□□□□□ -2.08
ATXN1P54253 Y_RNA.532-201ENST00000384590 113 ntBASIC2.08□□□□□ -2.08
ATXN1P54253 MIR9-2-201ENST00000384838 87 ntBASIC2.08□□□□□ -2.08
ATXN1P54253 RNU6-1307P-201ENST00000391012 103 ntBASIC2.08□□□□□ -2.08
ATXN1P54253 RPL31P63-201ENST00000422565 375 ntBASIC2.08□□□□□ -2.08
ATXN1P54253 SNRPGP13-201ENST00000442212 177 ntBASIC2.08□□□□□ -2.08
ATXN1P54253 AC025033.1-201ENST00000463883 194 ntBASIC2.08□□□□□ -2.08
ATXN1P54253 RPS23P4-201ENST00000487908 423 ntBASIC2.08□□□□□ -2.08
ATXN1P54253 RNU7-25P-201ENST00000516544 62 ntBASIC2.08□□□□□ -2.08
ATXN1P54253 AL358944.1-201ENST00000528537 144 ntBASIC2.08□□□□□ -2.08
ATXN1P54253 AP002004.2-201ENST00000531656 154 ntBASIC2.08□□□□□ -2.08
ATXN1P54253 AC004812.1-201ENST00000540773 146 ntBASIC2.08□□□□□ -2.08
ATXN1P54253 MIR664A-201ENST00000626086 82 ntBASIC2.08□□□□□ -2.08
ATXN1P54253 AP000553.5-201ENST00000641933 54 ntBASIC2.08□□□□□ -2.08
ATXN1P54253 ZNF355P-201ENST00000427301 3216 ntBASIC2.08□□□□□ -2.08
ATXN1P54253 SNORA1B-201ENST00000362535 133 ntBASIC2.07□□□□□ -2.08
ATXN1P54253 Y_RNA.171-201ENST00000363760 102 ntBASIC2.07□□□□□ -2.08
ATXN1P54253 Y_RNA.377-201ENST00000365644 108 ntBASIC2.07□□□□□ -2.08
ATXN1P54253 Y_RNA.430-201ENST00000384081 110 ntBASIC2.07□□□□□ -2.08
ATXN1P54253 Y_RNA.440-201ENST00000384120 114 ntBASIC2.07□□□□□ -2.08
ATXN1P54253 RNU4-62P-201ENST00000410125 130 ntBASIC2.07□□□□□ -2.08
ATXN1P54253 AC090844.1-201ENST00000422019 156 ntBASIC2.07□□□□□ -2.08
ATXN1P54253 AC245047.3-201ENST00000429428 127 ntBASIC2.07□□□□□ -2.08
ATXN1P54253 AL049830.1-201ENST00000468034 425 ntBASIC2.07□□□□□ -2.08
ATXN1P54253 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
ATXN1P54253 RNA5SP325-201ENST00000363756 130 ntBASIC2.06□□□□□ -2.08
ATXN1P54253 Y_RNA.253-201ENST00000364562 112 ntBASIC2.06□□□□□ -2.08
ATXN1P54253 RNA5SP190-201ENST00000365222 118 ntBASIC2.06□□□□□ -2.08
ATXN1P54253 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
ATXN1P54253 RNA5SP109-201ENST00000391010 116 ntBASIC2.06□□□□□ -2.08
ATXN1P54253 RNA5SP144-201ENST00000410846 116 ntBASIC2.06□□□□□ -2.08
ATXN1P54253 AL606517.2-201ENST00000442855 241 ntBASIC2.06□□□□□ -2.08
ATXN1P54253 RNU7-45P-201ENST00000459460 63 ntBASIC2.06□□□□□ -2.08
ATXN1P54253 HMGN1P7-201ENST00000491722 313 ntBASIC2.06□□□□□ -2.08
ATXN1P54253 AC093729.1-201ENST00000513074 128 ntBASIC2.06□□□□□ -2.08
ATXN1P54253 BX248123.2-201ENST00000606318 124 ntBASIC2.06□□□□□ -2.08
ATXN1P54253 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.06□□□□□ -2.08
ATXN1P54253 AC091932.4-201ENST00000623386 200 ntBASIC2.06□□□□□ -2.08
ATXN1P54253 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
ATXN1P54253 MIR342-201ENST00000362212 99 ntBASIC2.05□□□□□ -2.08
ATXN1P54253 Y_RNA.37-201ENST00000362606 108 ntBASIC2.05□□□□□ -2.08
ATXN1P54253 RNU6-1189P-201ENST00000383958 107 ntBASIC2.05□□□□□ -2.08
ATXN1P54253 Y_RNA.494-201ENST00000384432 111 ntBASIC2.05□□□□□ -2.08
ATXN1P54253 MIR548O-201ENST00000408583 114 ntBASIC2.05□□□□□ -2.08
ATXN1P54253 RNA5SP100-201ENST00000410903 110 ntBASIC2.05□□□□□ -2.08
ATXN1P54253 RNA5SP59-201ENST00000410922 110 ntBASIC2.05□□□□□ -2.08
ATXN1P54253 SNORD13-201ENST00000459299 104 ntBASIC2.05□□□□□ -2.08
ATXN1P54253 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.05□□□□□ -2.08
ATXN1P54253 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.05□□□□□ -2.08
ATXN1P54253 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.05□□□□□ -2.08
ATXN1P54253 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.05□□□□□ -2.08
ATXN1P54253 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
ATXN1P54253 Y_RNA.470-201ENST00000384307 117 ntBASIC2.04□□□□□ -2.08
ATXN1P54253 Y_RNA.547-201ENST00000384654 119 ntBASIC2.04□□□□□ -2.08
ATXN1P54253 MIR1276-201ENST00000408707 83 ntBASIC2.04□□□□□ -2.08
ATXN1P54253 RNA5SP489-201ENST00000410986 109 ntBASIC2.04□□□□□ -2.08
ATXN1P54253 SNX2P2-201ENST00000424553 323 ntBASIC2.04□□□□□ -2.08
ATXN1P54253 SUB1P4-201ENST00000566062 339 ntBASIC2.04□□□□□ -2.08
ATXN1P54253 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.04□□□□□ -2.08
ATXN1P54253 MIR3683-201ENST00000580847 82 ntBASIC2.04□□□□□ -2.08
ATXN1P54253 MIR6504-201ENST00000613520 61 ntBASIC2.04□□□□□ -2.08
ATXN1P54253 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.04□□□□□ -2.08
ATXN1P54253 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.04□□□□□ -2.08
ATXN1P54253 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
ATXN1P54253 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.03□□□□□ -2.08
ATXN1P54253 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
ATXN1P54253 Y_RNA.351-201ENST00000365436 96 ntBASIC2.03□□□□□ -2.08
ATXN1P54253 RNU6-42P-201ENST00000384165 107 ntBASIC2.03□□□□□ -2.08
ATXN1P54253 MIR34C-201ENST00000384831 77 ntBASIC2.03□□□□□ -2.08
ATXN1P54253 RN7SKP200-201ENST00000410564 320 ntBASIC2.03□□□□□ -2.08
ATXN1P54253 POLR2J4-204ENST00000418424 324 ntBASIC2.03□□□□□ -2.08
ATXN1P54253 AC003989.2-201ENST00000440224 169 ntBASIC2.03□□□□□ -2.08
ATXN1P54253 RNU1-40P-201ENST00000516816 164 ntBASIC2.03□□□□□ -2.08
ATXN1P54253 RNU1-97P-201ENST00000516872 164 ntBASIC2.03□□□□□ -2.08
ATXN1P54253 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.03□□□□□ -2.08
ATXN1P54253 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
ATXN1P54253 MIR126-201ENST00000362291 85 ntBASIC2.02□□□□□ -2.09
ATXN1P54253 RNU6-1313P-201ENST00000362622 102 ntBASIC2.02□□□□□ -2.09
ATXN1P54253 RNU6-315P-201ENST00000362666 107 ntBASIC2.02□□□□□ -2.09
ATXN1P54253 RNA5SP138-201ENST00000365098 114 ntBASIC2.02□□□□□ -2.09
ATXN1P54253 RNU6-540P-201ENST00000384622 101 ntBASIC2.02□□□□□ -2.09
ATXN1P54253 MIR519C-201ENST00000385053 87 ntBASIC2.02□□□□□ -2.09
ATXN1P54253 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
ATXN1P54253 RNU6-129P-201ENST00000391022 107 ntBASIC2.02□□□□□ -2.09
ATXN1P54253 RNU6-141P-201ENST00000410499 105 ntBASIC2.02□□□□□ -2.09
ATXN1P54253 RNU2-7P-201ENST00000410794 178 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 205.5 ms