Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 RPL39P28-201ENST00000465655 155 ntBASIC0.88□□□□□ -2.27
HOXD4P09016 SNORA25.12-201ENST00000516202 82 ntBASIC0.88□□□□□ -2.27
HOXD4P09016 RNU11-2P-201ENST00000516898 142 ntBASIC0.88□□□□□ -2.27
HOXD4P09016 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.88□□□□□ -2.27
HOXD4P09016 SEPT14P17-201ENST00000617978 177 ntBASIC0.88□□□□□ -2.27
HOXD4P09016 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.88□□□□□ -2.27
HOXD4P09016 Z97988.1-201ENST00000637697 135 ntBASIC0.88□□□□□ -2.27
HOXD4P09016 RNU6-508P-201ENST00000363231 103 ntBASIC0.87□□□□□ -2.27
HOXD4P09016 SNORA1.1-201ENST00000364671 133 ntBASIC0.87□□□□□ -2.27
HOXD4P09016 RNU6-460P-201ENST00000391158 108 ntBASIC0.87□□□□□ -2.27
HOXD4P09016 RNU7-200P-201ENST00000516105 62 ntBASIC0.87□□□□□ -2.27
HOXD4P09016 Y_RNA.686-201ENST00000516548 134 ntBASIC0.87□□□□□ -2.27
HOXD4P09016 MIR2115-201ENST00000516657 100 ntBASIC0.87□□□□□ -2.27
HOXD4P09016 CYP3A137P-201ENST00000562436 69 ntBASIC0.87□□□□□ -2.27
HOXD4P09016 AC008163.1-202ENST00000636004 2889 ntBASIC0.87□□□□□ -2.27
HOXD4P09016 Y_RNA.215-201ENST00000364204 112 ntBASIC0.86□□□□□ -2.27
HOXD4P09016 RNU4-16P-201ENST00000364737 141 ntBASIC0.86□□□□□ -2.27
HOXD4P09016 RNU6-396P-201ENST00000365369 105 ntBASIC0.86□□□□□ -2.27
HOXD4P09016 MIR569-201ENST00000385228 96 ntBASIC0.86□□□□□ -2.27
HOXD4P09016 MIR513C-201ENST00000401352 84 ntBASIC0.86□□□□□ -2.27
HOXD4P09016 RNU6-613P-201ENST00000410412 108 ntBASIC0.86□□□□□ -2.27
HOXD4P09016 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.86□□□□□ -2.27
HOXD4P09016 MIR548X2-201ENST00000579776 100 ntBASIC0.86□□□□□ -2.27
HOXD4P09016 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.86□□□□□ -2.27
HOXD4P09016 MIR6717-201ENST00000622747 73 ntBASIC0.86□□□□□ -2.27
HOXD4P09016 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.86□□□□□ -2.27
HOXD4P09016 RNU6-349P-201ENST00000362402 107 ntBASIC0.85□□□□□ -2.27
HOXD4P09016 Y_RNA.120-201ENST00000363304 110 ntBASIC0.85□□□□□ -2.27
HOXD4P09016 RNY1P6-201ENST00000384193 109 ntBASIC0.85□□□□□ -2.27
HOXD4P09016 Y_RNA.506-201ENST00000384494 102 ntBASIC0.85□□□□□ -2.27
HOXD4P09016 RNU6-1319P-201ENST00000390855 104 ntBASIC0.85□□□□□ -2.27
HOXD4P09016 RNU6-205P-201ENST00000390858 107 ntBASIC0.85□□□□□ -2.27
HOXD4P09016 RNU6-747P-201ENST00000390928 104 ntBASIC0.85□□□□□ -2.27
HOXD4P09016 RNU6-241P-201ENST00000391148 104 ntBASIC0.85□□□□□ -2.27
HOXD4P09016 RNU6-602P-201ENST00000411155 105 ntBASIC0.85□□□□□ -2.27
HOXD4P09016 RNU6-177P-201ENST00000411257 104 ntBASIC0.85□□□□□ -2.27
HOXD4P09016 AC063976.4-201ENST00000421971 163 ntBASIC0.85□□□□□ -2.27
HOXD4P09016 AC244023.1-201ENST00000426884 112 ntBASIC0.85□□□□□ -2.27
HOXD4P09016 AC002429.1-201ENST00000437672 148 ntBASIC0.85□□□□□ -2.27
HOXD4P09016 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.85□□□□□ -2.27
HOXD4P09016 UBL5P1-201ENST00000507979 193 ntBASIC0.85□□□□□ -2.27
HOXD4P09016 RNA5SP436-201ENST00000516020 115 ntBASIC0.85□□□□□ -2.27
HOXD4P09016 RNU6-346P-201ENST00000516288 111 ntBASIC0.85□□□□□ -2.27
HOXD4P09016 AC023827.1-201ENST00000569247 97 ntBASIC0.85□□□□□ -2.27
HOXD4P09016 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.85□□□□□ -2.27
HOXD4P09016 AC242498.1-201ENST00000604134 111 ntBASIC0.85□□□□□ -2.27
HOXD4P09016 AC021613.1-201ENST00000623880 111 ntBASIC0.85□□□□□ -2.27
HOXD4P09016 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.85□□□□□ -2.27
HOXD4P09016 RNU6-309P-201ENST00000364573 106 ntBASIC0.84□□□□□ -2.27
HOXD4P09016 RNU6-915P-201ENST00000364943 103 ntBASIC0.84□□□□□ -2.27
HOXD4P09016 SNORA20-201ENST00000384662 132 ntBASIC0.84□□□□□ -2.27
HOXD4P09016 MT-TN-201ENST00000387400 73 ntBASIC0.84□□□□□ -2.27
HOXD4P09016 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
HOXD4P09016 MTATP6P21-201ENST00000440681 189 ntBASIC0.84□□□□□ -2.27
HOXD4P09016 RNU7-90P-201ENST00000459216 62 ntBASIC0.84□□□□□ -2.27
HOXD4P09016 Y_RNA.651-201ENST00000459380 103 ntBASIC0.84□□□□□ -2.27
HOXD4P09016 RNA5SP272-201ENST00000516095 111 ntBASIC0.84□□□□□ -2.27
HOXD4P09016 RNU6-426P-201ENST00000516464 97 ntBASIC0.84□□□□□ -2.27
HOXD4P09016 Y_RNA.690-201ENST00000516603 95 ntBASIC0.84□□□□□ -2.27
HOXD4P09016 MIR3973-201ENST00000579824 107 ntBASIC0.84□□□□□ -2.27
HOXD4P09016 MIR4661-201ENST00000582720 75 ntBASIC0.84□□□□□ -2.27
HOXD4P09016 MIR6841-201ENST00000637129 72 ntBASIC0.84□□□□□ -2.27
HOXD4P09016 MIR377-201ENST00000362145 69 ntBASIC0.83□□□□□ -2.28
HOXD4P09016 RNA5SP325-201ENST00000363756 130 ntBASIC0.83□□□□□ -2.28
HOXD4P09016 SNORD18B-201ENST00000365659 72 ntBASIC0.83□□□□□ -2.28
HOXD4P09016 RNY1P5-201ENST00000383890 115 ntBASIC0.83□□□□□ -2.28
HOXD4P09016 RNU6-1062P-201ENST00000383908 107 ntBASIC0.83□□□□□ -2.28
HOXD4P09016 Y_RNA.420-201ENST00000384043 110 ntBASIC0.83□□□□□ -2.28
HOXD4P09016 Y_RNA.488-201ENST00000384403 102 ntBASIC0.83□□□□□ -2.28
HOXD4P09016 SNORA2B-201ENST00000384583 137 ntBASIC0.83□□□□□ -2.28
HOXD4P09016 SNORD38B-201ENST00000384690 67 ntBASIC0.83□□□□□ -2.28
HOXD4P09016 AL603914.1-201ENST00000401964 204 ntBASIC0.83□□□□□ -2.28
HOXD4P09016 RNA5SP261-201ENST00000410536 106 ntBASIC0.83□□□□□ -2.28
HOXD4P09016 RPS3AP1-201ENST00000413190 320 ntBASIC0.83□□□□□ -2.28
HOXD4P09016 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.83□□□□□ -2.28
HOXD4P09016 AC036111.3-201ENST00000526389 112 ntBASIC0.83□□□□□ -2.28
HOXD4P09016 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.83□□□□□ -2.28
HOXD4P09016 MIR4264-201ENST00000583520 66 ntBASIC0.83□□□□□ -2.28
HOXD4P09016 AP000753.3-201ENST00000604083 169 ntBASIC0.83□□□□□ -2.28
HOXD4P09016 SNORD38B-202ENST00000625943 69 ntBASIC0.83□□□□□ -2.28
HOXD4P09016 SNORA22.1-201ENST00000362701 134 ntBASIC0.82□□□□□ -2.28
HOXD4P09016 Y_RNA.205-201ENST00000364128 113 ntBASIC0.82□□□□□ -2.28
HOXD4P09016 Y_RNA.430-201ENST00000384081 110 ntBASIC0.82□□□□□ -2.28
HOXD4P09016 POLR2J4-204ENST00000418424 324 ntBASIC0.82□□□□□ -2.28
HOXD4P09016 RNU6-240P-201ENST00000516098 97 ntBASIC0.82□□□□□ -2.28
HOXD4P09016 MIR3152-201ENST00000579801 74 ntBASIC0.82□□□□□ -2.28
HOXD4P09016 AC106800.4-201ENST00000614905 153 ntBASIC0.82□□□□□ -2.28
HOXD4P09016 Y_RNA.168-201ENST00000363740 102 ntBASIC0.81□□□□□ -2.28
HOXD4P09016 SNORD114-24-201ENST00000365029 72 ntBASIC0.81□□□□□ -2.28
HOXD4P09016 RNU6-690P-201ENST00000365242 106 ntBASIC0.81□□□□□ -2.28
HOXD4P09016 MIR200A-201ENST00000384875 90 ntBASIC0.81□□□□□ -2.28
HOXD4P09016 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
HOXD4P09016 SNORD12C-201ENST00000386307 89 ntBASIC0.81□□□□□ -2.28
HOXD4P09016 RNU5E-3P-201ENST00000515913 68 ntBASIC0.81□□□□□ -2.28
HOXD4P09016 RN7SL793P-201ENST00000583259 296 ntBASIC0.81□□□□□ -2.28
HOXD4P09016 RNU6-94P-201ENST00000607728 107 ntBASIC0.81□□□□□ -2.28
HOXD4P09016 AC011603.4-201ENST00000611325 277 ntBASIC0.81□□□□□ -2.28
HOXD4P09016 uc_338.6-201ENST00000613544 171 ntBASIC0.81□□□□□ -2.28
HOXD4P09016 MIR6740-201ENST00000618268 113 ntBASIC0.81□□□□□ -2.28
HOXD4P09016 RNU6-774P-201ENST00000363238 107 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms