Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 Y_RNA.277-201ENST00000364754 102 ntBASIC0.41□□□□□ -2.34
GGPS1O95749 MIR3152-201ENST00000579801 74 ntBASIC0.41□□□□□ -2.34
GGPS1O95749 MIR4744-201ENST00000581563 82 ntBASIC0.41□□□□□ -2.34
GGPS1O95749 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.41□□□□□ -2.34
GGPS1O95749 Y_RNA.812-201ENST00000610788 101 ntBASIC0.41□□□□□ -2.34
GGPS1O95749 Y_RNA.784-201ENST00000613803 101 ntBASIC0.41□□□□□ -2.34
GGPS1O95749 Y_RNA.787-201ENST00000616522 101 ntBASIC0.41□□□□□ -2.34
GGPS1O95749 Y_RNA.780-201ENST00000617336 101 ntBASIC0.41□□□□□ -2.34
GGPS1O95749 Y_RNA.801-201ENST00000619005 101 ntBASIC0.41□□□□□ -2.34
GGPS1O95749 AL596211.1-201ENST00000569873 2277 ntBASIC0.41□□□□□ -2.34
GGPS1O95749 Y_RNA.54-201ENST00000362766 105 ntBASIC0.4□□□□□ -2.35
GGPS1O95749 Y_RNA.292-201ENST00000364904 97 ntBASIC0.4□□□□□ -2.35
GGPS1O95749 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.4□□□□□ -2.35
GGPS1O95749 AL358176.2-201ENST00000425769 204 ntBASIC0.4□□□□□ -2.35
GGPS1O95749 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.4□□□□□ -2.35
GGPS1O95749 RNU6-448P-201ENST00000517052 107 ntBASIC0.4□□□□□ -2.35
GGPS1O95749 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
GGPS1O95749 SNORA20-201ENST00000384662 132 ntBASIC0.39□□□□□ -2.35
GGPS1O95749 RNU6-679P-201ENST00000391003 106 ntBASIC0.39□□□□□ -2.35
GGPS1O95749 MIR548H3-201ENST00000408771 118 ntBASIC0.39□□□□□ -2.35
GGPS1O95749 SNORD93-201ENST00000408813 74 ntBASIC0.39□□□□□ -2.35
GGPS1O95749 RNA5SP237-201ENST00000410414 113 ntBASIC0.39□□□□□ -2.35
GGPS1O95749 AL121914.1-201ENST00000450188 156 ntBASIC0.39□□□□□ -2.35
GGPS1O95749 SNORD116-25-201ENST00000516517 92 ntBASIC0.39□□□□□ -2.35
GGPS1O95749 RNA5SP94-201ENST00000516917 108 ntBASIC0.39□□□□□ -2.35
GGPS1O95749 AC008737.2-201ENST00000599446 118 ntBASIC0.39□□□□□ -2.35
GGPS1O95749 MIR6841-201ENST00000637129 72 ntBASIC0.39□□□□□ -2.35
GGPS1O95749 RNU6-978P-201ENST00000364371 103 ntBASIC0.38□□□□□ -2.35
GGPS1O95749 Y_RNA.258-201ENST00000364613 105 ntBASIC0.38□□□□□ -2.35
GGPS1O95749 RNA5SP117-201ENST00000365294 118 ntBASIC0.38□□□□□ -2.35
GGPS1O95749 RNU6-597P-201ENST00000365620 102 ntBASIC0.38□□□□□ -2.35
GGPS1O95749 RNU2-38P-201ENST00000410856 79 ntBASIC0.38□□□□□ -2.35
GGPS1O95749 RNU4-83P-201ENST00000410863 133 ntBASIC0.38□□□□□ -2.35
GGPS1O95749 SEPT7P4-201ENST00000437076 306 ntBASIC0.38□□□□□ -2.35
GGPS1O95749 MIR924-201ENST00000638017 53 ntBASIC0.38□□□□□ -2.35
GGPS1O95749 AC090625.1-201ENST00000357130 210 ntBASIC0.37□□□□□ -2.35
GGPS1O95749 Y_RNA.42-201ENST00000362660 108 ntBASIC0.37□□□□□ -2.35
GGPS1O95749 Y_RNA.47-201ENST00000362697 108 ntBASIC0.37□□□□□ -2.35
GGPS1O95749 Y_RNA.149-201ENST00000363558 117 ntBASIC0.37□□□□□ -2.35
GGPS1O95749 RNA5SP517-201ENST00000364724 117 ntBASIC0.37□□□□□ -2.35
GGPS1O95749 RNU6-578P-201ENST00000390980 103 ntBASIC0.37□□□□□ -2.35
GGPS1O95749 RPL39P25-201ENST00000449384 154 ntBASIC0.37□□□□□ -2.35
GGPS1O95749 RNU7-70P-201ENST00000516941 66 ntBASIC0.37□□□□□ -2.35
GGPS1O95749 RNA5SP330-201ENST00000517096 96 ntBASIC0.37□□□□□ -2.35
GGPS1O95749 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.37□□□□□ -2.35
GGPS1O95749 AP003327.1-201ENST00000529684 127 ntBASIC0.37□□□□□ -2.35
GGPS1O95749 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
GGPS1O95749 MIR378D2-201ENST00000580636 98 ntBASIC0.37□□□□□ -2.35
GGPS1O95749 MIR8066-201ENST00000617280 78 ntBASIC0.37□□□□□ -2.35
GGPS1O95749 uc_338.16-201ENST00000621804 95 ntBASIC0.37□□□□□ -2.35
GGPS1O95749 MIR330-201ENST00000362196 94 ntBASIC0.36□□□□□ -2.35
GGPS1O95749 RNU6-738P-201ENST00000384531 106 ntBASIC0.36□□□□□ -2.35
GGPS1O95749 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.36□□□□□ -2.35
GGPS1O95749 SNORA40.8-201ENST00000411034 126 ntBASIC0.36□□□□□ -2.35
GGPS1O95749 SNORD127-201ENST00000458892 86 ntBASIC0.36□□□□□ -2.35
GGPS1O95749 AC021613.1-201ENST00000623880 111 ntBASIC0.36□□□□□ -2.35
GGPS1O95749 SNORA22.1-201ENST00000362701 134 ntBASIC0.35□□□□□ -2.35
GGPS1O95749 Y_RNA.288-201ENST00000364854 92 ntBASIC0.35□□□□□ -2.35
GGPS1O95749 Y_RNA.562-201ENST00000384695 113 ntBASIC0.35□□□□□ -2.35
GGPS1O95749 MIR518A1-201ENST00000385068 85 ntBASIC0.35□□□□□ -2.35
GGPS1O95749 RNA5SP127-201ENST00000411051 133 ntBASIC0.35□□□□□ -2.35
GGPS1O95749 SNORD71-201ENST00000411292 86 ntBASIC0.35□□□□□ -2.35
GGPS1O95749 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.35□□□□□ -2.35
GGPS1O95749 SNORA25.12-201ENST00000516202 82 ntBASIC0.35□□□□□ -2.35
GGPS1O95749 MIR3678-201ENST00000578455 94 ntBASIC0.35□□□□□ -2.35
GGPS1O95749 MIR8087-201ENST00000612745 78 ntBASIC0.35□□□□□ -2.35
GGPS1O95749 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.35□□□□□ -2.35
GGPS1O95749 Y_RNA.121-201ENST00000363309 113 ntBASIC0.34□□□□□ -2.36
GGPS1O95749 Y_RNA.308-201ENST00000365043 101 ntBASIC0.34□□□□□ -2.36
GGPS1O95749 RNY4P28-201ENST00000365281 93 ntBASIC0.34□□□□□ -2.36
GGPS1O95749 MIR624-201ENST00000385217 97 ntBASIC0.34□□□□□ -2.36
GGPS1O95749 SCARNA15-202ENST00000516881 127 ntBASIC0.34□□□□□ -2.36
GGPS1O95749 AC141846.1-201ENST00000568348 142 ntBASIC0.34□□□□□ -2.36
GGPS1O95749 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.33□□□□□ -2.36
GGPS1O95749 MTND1P19-201ENST00000511780 315 ntBASIC0.33□□□□□ -2.36
GGPS1O95749 RNY3P16-201ENST00000516338 101 ntBASIC0.33□□□□□ -2.36
GGPS1O95749 MIR4514-201ENST00000581410 57 ntBASIC0.33□□□□□ -2.36
GGPS1O95749 RNU2-4P-201ENST00000606190 192 ntBASIC0.33□□□□□ -2.36
GGPS1O95749 RNU6-1327P-201ENST00000365302 105 ntBASIC0.32□□□□□ -2.36
GGPS1O95749 Y_RNA.459-201ENST00000384251 102 ntBASIC0.32□□□□□ -2.36
GGPS1O95749 SNORA8.2-201ENST00000384372 139 ntBASIC0.32□□□□□ -2.36
GGPS1O95749 U8.15-201ENST00000390947 134 ntBASIC0.32□□□□□ -2.36
GGPS1O95749 RNU6-493P-201ENST00000391321 108 ntBASIC0.32□□□□□ -2.36
GGPS1O95749 Y_RNA.797-201ENST00000515977 94 ntBASIC0.32□□□□□ -2.36
GGPS1O95749 RNA5SP134-201ENST00000516492 96 ntBASIC0.32□□□□□ -2.36
GGPS1O95749 AC022523.2-201ENST00000561045 150 ntBASIC0.32□□□□□ -2.36
GGPS1O95749 AC133485.4-201ENST00000561835 220 ntBASIC0.32□□□□□ -2.36
GGPS1O95749 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
GGPS1O95749 SNORD44.1-201ENST00000363202 61 ntBASIC0.31□□□□□ -2.36
GGPS1O95749 Y_RNA.115-201ENST00000363272 98 ntBASIC0.31□□□□□ -2.36
GGPS1O95749 SNORD118-201ENST00000363593 134 ntBASIC0.31□□□□□ -2.36
GGPS1O95749 RNU6-643P-201ENST00000384018 107 ntBASIC0.31□□□□□ -2.36
GGPS1O95749 RNU6-893P-201ENST00000458841 100 ntBASIC0.31□□□□□ -2.36
GGPS1O95749 RNU6-1149P-201ENST00000516810 97 ntBASIC0.31□□□□□ -2.36
GGPS1O95749 SNORA25.18-201ENST00000607153 114 ntBASIC0.31□□□□□ -2.36
GGPS1O95749 MIR6082-201ENST00000613604 109 ntBASIC0.31□□□□□ -2.36
GGPS1O95749 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.31□□□□□ -2.36
GGPS1O95749 MIR103A1-201ENST00000362165 78 ntBASIC0.3□□□□□ -2.36
GGPS1O95749 Y_RNA.13-201ENST00000362403 112 ntBASIC0.3□□□□□ -2.36
GGPS1O95749 RNU6-403P-201ENST00000363163 104 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 201.9 ms