Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 RNU6-1319P-201ENST00000390855 104 ntBASIC0.36□□□□□ -2.35
HCN1O60741 RNU6-747P-201ENST00000390928 104 ntBASIC0.36□□□□□ -2.35
HCN1O60741 RNU6-241P-201ENST00000391148 104 ntBASIC0.36□□□□□ -2.35
HCN1O60741 MIR548H3-201ENST00000408771 118 ntBASIC0.36□□□□□ -2.35
HCN1O60741 MIR1197-201ENST00000408818 88 ntBASIC0.36□□□□□ -2.35
HCN1O60741 RNU6-447P-201ENST00000410293 104 ntBASIC0.36□□□□□ -2.35
HCN1O60741 RNU6-1118P-201ENST00000410382 104 ntBASIC0.36□□□□□ -2.35
HCN1O60741 RNU6-1076P-201ENST00000410397 104 ntBASIC0.36□□□□□ -2.35
HCN1O60741 RNU6-355P-201ENST00000410427 104 ntBASIC0.36□□□□□ -2.35
HCN1O60741 RNU6-791P-201ENST00000410467 104 ntBASIC0.36□□□□□ -2.35
HCN1O60741 RNU6-705P-201ENST00000410601 104 ntBASIC0.36□□□□□ -2.35
HCN1O60741 RNU6-1100P-201ENST00000410691 104 ntBASIC0.36□□□□□ -2.35
HCN1O60741 RNU6-860P-201ENST00000410860 104 ntBASIC0.36□□□□□ -2.35
HCN1O60741 RNA5SP127-201ENST00000411051 133 ntBASIC0.36□□□□□ -2.35
HCN1O60741 RNU6-1217P-201ENST00000411276 104 ntBASIC0.36□□□□□ -2.35
HCN1O60741 RNU6-785P-201ENST00000411324 104 ntBASIC0.36□□□□□ -2.35
HCN1O60741 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.36□□□□□ -2.35
HCN1O60741 SNORD127-201ENST00000458892 86 ntBASIC0.36□□□□□ -2.35
HCN1O60741 RNU7-102P-201ENST00000458948 62 ntBASIC0.36□□□□□ -2.35
HCN1O60741 RNU7-156P-201ENST00000517214 74 ntBASIC0.36□□□□□ -2.35
HCN1O60741 AC090897.1-201ENST00000580909 226 ntBASIC0.36□□□□□ -2.35
HCN1O60741 MIR4744-201ENST00000581563 82 ntBASIC0.36□□□□□ -2.35
HCN1O60741 SNORD92-201ENST00000585078 85 ntBASIC0.36□□□□□ -2.35
HCN1O60741 AC008608.1-201ENST00000603910 127 ntBASIC0.36□□□□□ -2.35
HCN1O60741 U6.90-201ENST00000614007 104 ntBASIC0.36□□□□□ -2.35
HCN1O60741 U6.70-201ENST00000620287 104 ntBASIC0.36□□□□□ -2.35
HCN1O60741 AC091932.4-201ENST00000623386 200 ntBASIC0.36□□□□□ -2.35
HCN1O60741 Y_RNA.251-201ENST00000364551 99 ntBASIC0.35□□□□□ -2.35
HCN1O60741 Y_RNA.288-201ENST00000364854 92 ntBASIC0.35□□□□□ -2.35
HCN1O60741 Y_RNA.430-201ENST00000384081 110 ntBASIC0.35□□□□□ -2.35
HCN1O60741 Y_RNA.459-201ENST00000384251 102 ntBASIC0.35□□□□□ -2.35
HCN1O60741 RNU6-1011P-201ENST00000384668 107 ntBASIC0.35□□□□□ -2.35
HCN1O60741 SNORD100-201ENST00000408573 76 ntBASIC0.35□□□□□ -2.35
HCN1O60741 RNU2-38P-201ENST00000410856 79 ntBASIC0.35□□□□□ -2.35
HCN1O60741 AL121914.1-201ENST00000450188 156 ntBASIC0.35□□□□□ -2.35
HCN1O60741 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.35□□□□□ -2.35
HCN1O60741 AL596211.1-201ENST00000569873 2277 ntBASIC0.35□□□□□ -2.35
HCN1O60741 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.35□□□□□ -2.35
HCN1O60741 Y_RNA.562-201ENST00000384695 113 ntBASIC0.34□□□□□ -2.36
HCN1O60741 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.34□□□□□ -2.36
HCN1O60741 SEPT7P4-201ENST00000437076 306 ntBASIC0.34□□□□□ -2.36
HCN1O60741 SNORD116-25-201ENST00000516517 92 ntBASIC0.34□□□□□ -2.36
HCN1O60741 MIR3152-201ENST00000579801 74 ntBASIC0.34□□□□□ -2.36
HCN1O60741 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
HCN1O60741 RNU6-578P-201ENST00000390980 103 ntBASIC0.33□□□□□ -2.36
HCN1O60741 AC002350.1-201ENST00000490759 375 ntBASIC0.33□□□□□ -2.36
HCN1O60741 MIR378D2-201ENST00000580636 98 ntBASIC0.33□□□□□ -2.36
HCN1O60741 AL662814.1-201ENST00000617364 121 ntBASIC0.33□□□□□ -2.36
HCN1O60741 MIRLET7D-201ENST00000362263 87 ntBASIC0.32□□□□□ -2.36
HCN1O60741 RNA5SP257-201ENST00000363023 116 ntBASIC0.32□□□□□ -2.36
HCN1O60741 RNU6-978P-201ENST00000364371 103 ntBASIC0.32□□□□□ -2.36
HCN1O60741 Y_RNA.308-201ENST00000365043 101 ntBASIC0.32□□□□□ -2.36
HCN1O60741 RNY4P28-201ENST00000365281 93 ntBASIC0.32□□□□□ -2.36
HCN1O60741 SNORA20-201ENST00000384662 132 ntBASIC0.32□□□□□ -2.36
HCN1O60741 Y_RNA.556-201ENST00000384677 113 ntBASIC0.32□□□□□ -2.36
HCN1O60741 RNU6-679P-201ENST00000391003 106 ntBASIC0.32□□□□□ -2.36
HCN1O60741 RNA5SP237-201ENST00000410414 113 ntBASIC0.32□□□□□ -2.36
HCN1O60741 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.32□□□□□ -2.36
HCN1O60741 RNY3P16-201ENST00000516338 101 ntBASIC0.32□□□□□ -2.36
HCN1O60741 SNORA62.5-201ENST00000516634 120 ntBASIC0.32□□□□□ -2.36
HCN1O60741 RNU7-70P-201ENST00000516941 66 ntBASIC0.32□□□□□ -2.36
HCN1O60741 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.32□□□□□ -2.36
HCN1O60741 RNU2-4P-201ENST00000606190 192 ntBASIC0.32□□□□□ -2.36
HCN1O60741 AC092634.7-201ENST00000621022 103 ntBASIC0.32□□□□□ -2.36
HCN1O60741 Y_RNA.121-201ENST00000363309 113 ntBASIC0.31□□□□□ -2.36
HCN1O60741 RNU6-597P-201ENST00000365620 102 ntBASIC0.31□□□□□ -2.36
HCN1O60741 RNU6-493P-201ENST00000391321 108 ntBASIC0.31□□□□□ -2.36
HCN1O60741 SNORD93-201ENST00000408813 74 ntBASIC0.31□□□□□ -2.36
HCN1O60741 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.31□□□□□ -2.36
HCN1O60741 MTND1P19-201ENST00000511780 315 ntBASIC0.31□□□□□ -2.36
HCN1O60741 Y_RNA.797-201ENST00000515977 94 ntBASIC0.31□□□□□ -2.36
HCN1O60741 RNU6-448P-201ENST00000517052 107 ntBASIC0.31□□□□□ -2.36
HCN1O60741 AC021613.1-201ENST00000623880 111 ntBASIC0.31□□□□□ -2.36
HCN1O60741 MIR6841-201ENST00000637129 72 ntBASIC0.31□□□□□ -2.36
HCN1O60741 SNORD27-201ENST00000363981 72 ntBASIC0.3□□□□□ -2.36
HCN1O60741 SNORD58.1-201ENST00000391313 66 ntBASIC0.3□□□□□ -2.36
HCN1O60741 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.3□□□□□ -2.36
HCN1O60741 MTCYBP9-201ENST00000431021 303 ntBASIC0.3□□□□□ -2.36
HCN1O60741 RPL39P25-201ENST00000449384 154 ntBASIC0.3□□□□□ -2.36
HCN1O60741 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
HCN1O60741 MIR4514-201ENST00000581410 57 ntBASIC0.3□□□□□ -2.36
HCN1O60741 AL360085.1-201ENST00000604713 532 ntBASIC0.3□□□□□ -2.36
HCN1O60741 SNORA22.1-201ENST00000362701 134 ntBASIC0.29□□□□□ -2.36
HCN1O60741 Y_RNA.133-201ENST00000363428 110 ntBASIC0.29□□□□□ -2.36
HCN1O60741 RNA5SP517-201ENST00000364724 117 ntBASIC0.29□□□□□ -2.36
HCN1O60741 RNA5SP117-201ENST00000365294 118 ntBASIC0.29□□□□□ -2.36
HCN1O60741 MIR624-201ENST00000385217 97 ntBASIC0.29□□□□□ -2.36
HCN1O60741 RNU4-83P-201ENST00000410863 133 ntBASIC0.29□□□□□ -2.36
HCN1O60741 MTND2P23-201ENST00000422990 651 ntBASIC0.29□□□□□ -2.36
HCN1O60741 Y_RNA.668-201ENST00000516233 93 ntBASIC0.29□□□□□ -2.36
HCN1O60741 Y_RNA.681-201ENST00000516445 113 ntBASIC0.29□□□□□ -2.36
HCN1O60741 SCARNA15-202ENST00000516881 127 ntBASIC0.29□□□□□ -2.36
HCN1O60741 RNA5SP94-201ENST00000516917 108 ntBASIC0.29□□□□□ -2.36
HCN1O60741 MIR8066-201ENST00000617280 78 ntBASIC0.29□□□□□ -2.36
HCN1O60741 Y_RNA.20-201ENST00000362479 113 ntBASIC0.28□□□□□ -2.36
HCN1O60741 Y_RNA.42-201ENST00000362660 108 ntBASIC0.28□□□□□ -2.36
HCN1O60741 RNU6-694P-201ENST00000364071 147 ntBASIC0.28□□□□□ -2.36
HCN1O60741 RNU6-643P-201ENST00000384018 107 ntBASIC0.28□□□□□ -2.36
HCN1O60741 Y_RNA.539-201ENST00000384635 107 ntBASIC0.28□□□□□ -2.36
HCN1O60741 Y_RNA.571-201ENST00000384753 98 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 177 ms