Protein–RNA interactions for Protein: O43818

RRP9, U3 small nucleolar RNA-interacting protein 2, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9O43818 RNU4-61P-201ENST00000411243 107 ntBASIC1.24□□□□□ -2.21
RRP9O43818 snoU13.2-201ENST00000459201 104 ntBASIC1.24□□□□□ -2.21
RRP9O43818 RNY4P20-201ENST00000516678 93 ntBASIC1.24□□□□□ -2.21
RRP9O43818 SNORA31.24-201ENST00000517232 57 ntBASIC1.24□□□□□ -2.21
RRP9O43818 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
RRP9O43818 RNU6-580P-201ENST00000365159 107 ntBASIC1.23□□□□□ -2.21
RRP9O43818 RNU6-80P-201ENST00000384195 107 ntBASIC1.23□□□□□ -2.21
RRP9O43818 Y_RNA.531-201ENST00000384589 121 ntBASIC1.23□□□□□ -2.21
RRP9O43818 MIR588-201ENST00000384900 83 ntBASIC1.23□□□□□ -2.21
RRP9O43818 RNU6-1258P-201ENST00000516911 111 ntBASIC1.23□□□□□ -2.21
RRP9O43818 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.23□□□□□ -2.21
RRP9O43818 IGKV1-22-201ENST00000524313 326 ntBASIC1.23□□□□□ -2.21
RRP9O43818 AC036111.3-201ENST00000526389 112 ntBASIC1.23□□□□□ -2.21
RRP9O43818 AC004812.1-201ENST00000540773 146 ntBASIC1.23□□□□□ -2.21
RRP9O43818 AC023827.1-201ENST00000569247 97 ntBASIC1.23□□□□□ -2.21
RRP9O43818 AC106800.4-201ENST00000614905 153 ntBASIC1.23□□□□□ -2.21
RRP9O43818 AC132825.6-201ENST00000638861 357 ntBASIC1.23□□□□□ -2.21
RRP9O43818 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
RRP9O43818 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
RRP9O43818 SNORD115-2-201ENST00000362842 82 ntBASIC1.22□□□□□ -2.21
RRP9O43818 SNORD115-20-201ENST00000365099 82 ntBASIC1.22□□□□□ -2.21
RRP9O43818 RNU6-81P-201ENST00000365608 104 ntBASIC1.22□□□□□ -2.21
RRP9O43818 SNORD111-201ENST00000408139 94 ntBASIC1.22□□□□□ -2.21
RRP9O43818 RNA5SP237-201ENST00000410414 113 ntBASIC1.22□□□□□ -2.21
RRP9O43818 AL512326.2-201ENST00000426359 151 ntBASIC1.22□□□□□ -2.21
RRP9O43818 AC002429.1-201ENST00000437672 148 ntBASIC1.22□□□□□ -2.21
RRP9O43818 RNU6-237P-201ENST00000515985 71 ntBASIC1.22□□□□□ -2.21
RRP9O43818 RNU6-1061P-201ENST00000516530 99 ntBASIC1.22□□□□□ -2.21
RRP9O43818 MIR4769-201ENST00000584126 77 ntBASIC1.22□□□□□ -2.21
RRP9O43818 MIR6740-201ENST00000618268 113 ntBASIC1.22□□□□□ -2.21
RRP9O43818 RNU6-959P-201ENST00000384671 107 ntBASIC1.21□□□□□ -2.22
RRP9O43818 MIR19B1-201ENST00000384829 87 ntBASIC1.21□□□□□ -2.22
RRP9O43818 RNA5SP136-201ENST00000410906 107 ntBASIC1.21□□□□□ -2.22
RRP9O43818 RPL39P28-201ENST00000465655 155 ntBASIC1.21□□□□□ -2.22
RRP9O43818 RNA5SP458-201ENST00000516188 119 ntBASIC1.21□□□□□ -2.22
RRP9O43818 RNU7-40P-201ENST00000516397 64 ntBASIC1.21□□□□□ -2.22
RRP9O43818 RNA5SP33-201ENST00000516687 98 ntBASIC1.21□□□□□ -2.22
RRP9O43818 AL512598.1-201ENST00000610158 273 ntBASIC1.21□□□□□ -2.22
RRP9O43818 AC012676.2-201ENST00000619258 186 ntBASIC1.21□□□□□ -2.22
RRP9O43818 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
RRP9O43818 RNA5SP99-201ENST00000364020 114 ntBASIC1.2□□□□□ -2.22
RRP9O43818 Y_RNA.218-201ENST00000364218 104 ntBASIC1.2□□□□□ -2.22
RRP9O43818 Y_RNA.470-201ENST00000384307 117 ntBASIC1.2□□□□□ -2.22
RRP9O43818 SNORA18-201ENST00000384416 132 ntBASIC1.2□□□□□ -2.22
RRP9O43818 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.2□□□□□ -2.22
RRP9O43818 MIR1263-201ENST00000408324 86 ntBASIC1.2□□□□□ -2.22
RRP9O43818 RNU6-1165P-201ENST00000410119 107 ntBASIC1.2□□□□□ -2.22
RRP9O43818 RNU6-772P-201ENST00000516042 105 ntBASIC1.2□□□□□ -2.22
RRP9O43818 RNU6-781P-201ENST00000516377 101 ntBASIC1.2□□□□□ -2.22
RRP9O43818 RNU1-92P-201ENST00000517017 135 ntBASIC1.2□□□□□ -2.22
RRP9O43818 RNU6-789P-201ENST00000517105 102 ntBASIC1.2□□□□□ -2.22
RRP9O43818 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
RRP9O43818 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.2□□□□□ -2.22
RRP9O43818 Y_RNA.71-201ENST00000362892 104 ntBASIC1.19□□□□□ -2.22
RRP9O43818 Y_RNA.140-201ENST00000363474 103 ntBASIC1.19□□□□□ -2.22
RRP9O43818 Y_RNA.299-201ENST00000364973 94 ntBASIC1.19□□□□□ -2.22
RRP9O43818 SNORD58C-201ENST00000365223 64 ntBASIC1.19□□□□□ -2.22
RRP9O43818 MIR563-201ENST00000385080 79 ntBASIC1.19□□□□□ -2.22
RRP9O43818 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.19□□□□□ -2.22
RRP9O43818 RNU6-994P-201ENST00000410507 111 ntBASIC1.19□□□□□ -2.22
RRP9O43818 RNU6-1234P-201ENST00000516877 103 ntBASIC1.19□□□□□ -2.22
RRP9O43818 MIR4781-201ENST00000585250 76 ntBASIC1.19□□□□□ -2.22
RRP9O43818 AL662814.1-201ENST00000617364 121 ntBASIC1.19□□□□□ -2.22
RRP9O43818 RNU6-60P-201ENST00000364792 103 ntBASIC1.18□□□□□ -2.22
RRP9O43818 SNORD116-14-201ENST00000383894 92 ntBASIC1.18□□□□□ -2.22
RRP9O43818 SNORD116-17-201ENST00000383929 92 ntBASIC1.18□□□□□ -2.22
RRP9O43818 SNORD116-15-201ENST00000384445 92 ntBASIC1.18□□□□□ -2.22
RRP9O43818 RNU6-342P-201ENST00000384521 104 ntBASIC1.18□□□□□ -2.22
RRP9O43818 SNORD116-19-201ENST00000384729 92 ntBASIC1.18□□□□□ -2.22
RRP9O43818 RNU6-1237P-201ENST00000384777 107 ntBASIC1.18□□□□□ -2.22
RRP9O43818 RNU1-123P-201ENST00000458950 160 ntBASIC1.18□□□□□ -2.22
RRP9O43818 RNU7-107P-201ENST00000459121 61 ntBASIC1.18□□□□□ -2.22
RRP9O43818 RNA5SP404-201ENST00000517118 132 ntBASIC1.18□□□□□ -2.22
RRP9O43818 AC022523.2-201ENST00000561045 150 ntBASIC1.18□□□□□ -2.22
RRP9O43818 MIR3124-201ENST00000582636 67 ntBASIC1.18□□□□□ -2.22
RRP9O43818 RNU6-94P-201ENST00000607728 107 ntBASIC1.18□□□□□ -2.22
RRP9O43818 MT-TF-201ENST00000387314 71 ntBASIC1.17□□□□□ -2.22
RRP9O43818 MIR18B-201ENST00000454574 71 ntBASIC1.17□□□□□ -2.22
RRP9O43818 RPS23P4-201ENST00000487908 423 ntBASIC1.17□□□□□ -2.22
RRP9O43818 COX6CP6-201ENST00000490840 228 ntBASIC1.17□□□□□ -2.22
RRP9O43818 MIR548AE2-201ENST00000583456 67 ntBASIC1.17□□□□□ -2.22
RRP9O43818 AC025166.1-201ENST00000612411 163 ntBASIC1.17□□□□□ -2.22
RRP9O43818 ZNF209P-201ENST00000593450 2304 ntBASIC1.16□□□□□ -2.22
RRP9O43818 RNU1-124P-201ENST00000363861 145 ntBASIC1.16□□□□□ -2.22
RRP9O43818 Y_RNA.213-201ENST00000364178 111 ntBASIC1.16□□□□□ -2.22
RRP9O43818 MIRLET7F2-201ENST00000385277 83 ntBASIC1.16□□□□□ -2.22
RRP9O43818 MIR759-201ENST00000390224 91 ntBASIC1.16□□□□□ -2.22
RRP9O43818 UBL5P1-201ENST00000507979 193 ntBASIC1.16□□□□□ -2.22
RRP9O43818 AC141846.1-201ENST00000568348 142 ntBASIC1.16□□□□□ -2.22
RRP9O43818 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.16□□□□□ -2.22
RRP9O43818 MIR4295-201ENST00000585286 85 ntBASIC1.16□□□□□ -2.22
RRP9O43818 uc_338.6-201ENST00000613544 171 ntBASIC1.16□□□□□ -2.22
RRP9O43818 AL157777.2-201ENST00000258070 137 ntBASIC1.15□□□□□ -2.23
RRP9O43818 MIR378A-201ENST00000362177 66 ntBASIC1.15□□□□□ -2.23
RRP9O43818 MIR30D-201ENST00000362283 70 ntBASIC1.15□□□□□ -2.23
RRP9O43818 Y_RNA.127-201ENST00000363386 109 ntBASIC1.15□□□□□ -2.23
RRP9O43818 Y_RNA.198-201ENST00000364013 98 ntBASIC1.15□□□□□ -2.23
RRP9O43818 SNORA32-201ENST00000384072 121 ntBASIC1.15□□□□□ -2.23
RRP9O43818 Y_RNA.528-201ENST00000384575 108 ntBASIC1.15□□□□□ -2.23
RRP9O43818 RNU6-1104P-201ENST00000384723 104 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms