Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MIR8065-201ENST00000620577 100 ntBASIC2.4□□□□□ -2.03
SOX1O00570 AC008133.2-201ENST00000624540 351 ntBASIC2.4□□□□□ -2.03
SOX1O00570 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SOX1O00570 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
SOX1O00570 RNU6-813P-201ENST00000384691 107 ntBASIC2.39□□□□□ -2.03
SOX1O00570 SNORA40.18-201ENST00000391200 128 ntBASIC2.39□□□□□ -2.03
SOX1O00570 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.39□□□□□ -2.03
SOX1O00570 MIR1276-201ENST00000408707 83 ntBASIC2.39□□□□□ -2.03
SOX1O00570 AC109327.2-201ENST00000448339 378 ntBASIC2.39□□□□□ -2.03
SOX1O00570 UBL5P1-201ENST00000507979 193 ntBASIC2.39□□□□□ -2.03
SOX1O00570 SNORA31.17-201ENST00000516953 127 ntBASIC2.39□□□□□ -2.03
SOX1O00570 SNORA31.25-201ENST00000517242 134 ntBASIC2.39□□□□□ -2.03
SOX1O00570 MIR4529-201ENST00000578110 78 ntBASIC2.39□□□□□ -2.03
SOX1O00570 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.39□□□□□ -2.03
SOX1O00570 MIR206-201ENST00000384872 86 ntBASIC2.38□□□□□ -2.03
SOX1O00570 RNU6-602P-201ENST00000411155 105 ntBASIC2.38□□□□□ -2.03
SOX1O00570 HMGN2P35-201ENST00000412164 270 ntBASIC2.38□□□□□ -2.03
SOX1O00570 AC090844.1-201ENST00000422019 156 ntBASIC2.38□□□□□ -2.03
SOX1O00570 SNORD13-201ENST00000459299 104 ntBASIC2.38□□□□□ -2.03
SOX1O00570 AC022137.1-201ENST00000483735 151 ntBASIC2.38□□□□□ -2.03
SOX1O00570 RNU6-917P-201ENST00000516294 104 ntBASIC2.38□□□□□ -2.03
SOX1O00570 MIR4446-201ENST00000578505 67 ntBASIC2.38□□□□□ -2.03
SOX1O00570 BX248123.2-201ENST00000606318 124 ntBASIC2.38□□□□□ -2.03
SOX1O00570 SNORD38.1-201ENST00000363863 68 ntBASIC2.37□□□□□ -2.03
SOX1O00570 SNORD58A-201ENST00000383875 65 ntBASIC2.37□□□□□ -2.03
SOX1O00570 RNU7-79P-201ENST00000516082 62 ntBASIC2.37□□□□□ -2.03
SOX1O00570 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.37□□□□□ -2.03
SOX1O00570 MIR376B-201ENST00000614515 100 ntBASIC2.37□□□□□ -2.03
SOX1O00570 VTRNA1-1-201ENST00000363120 99 ntBASIC2.36□□□□□ -2.03
SOX1O00570 SNORD116-10-201ENST00000363791 102 ntBASIC2.36□□□□□ -2.03
SOX1O00570 RNU6-675P-201ENST00000384236 104 ntBASIC2.36□□□□□ -2.03
SOX1O00570 RNU6-242P-201ENST00000384359 107 ntBASIC2.36□□□□□ -2.03
SOX1O00570 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SOX1O00570 RNU6-1086P-201ENST00000410930 100 ntBASIC2.36□□□□□ -2.03
SOX1O00570 RPL39P39-201ENST00000455840 151 ntBASIC2.36□□□□□ -2.03
SOX1O00570 RNU6-1006P-201ENST00000516998 103 ntBASIC2.36□□□□□ -2.03
SOX1O00570 CYP3A52P-201ENST00000563326 91 ntBASIC2.36□□□□□ -2.03
SOX1O00570 RMST_2.1-201ENST00000617263 136 ntBASIC2.36□□□□□ -2.03
SOX1O00570 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
SOX1O00570 SNORD114-26-201ENST00000363543 72 ntBASIC2.35□□□□□ -2.03
SOX1O00570 SNORA3A-201ENST00000364113 130 ntBASIC2.35□□□□□ -2.03
SOX1O00570 Y_RNA.247-201ENST00000364500 92 ntBASIC2.35□□□□□ -2.03
SOX1O00570 RNU6-203P-201ENST00000384038 104 ntBASIC2.35□□□□□ -2.03
SOX1O00570 RNU1-52P-201ENST00000384190 164 ntBASIC2.35□□□□□ -2.03
SOX1O00570 MIR653-201ENST00000385279 96 ntBASIC2.35□□□□□ -2.03
SOX1O00570 U8.15-201ENST00000390947 134 ntBASIC2.35□□□□□ -2.03
SOX1O00570 AC004965.1-201ENST00000413033 213 ntBASIC2.35□□□□□ -2.03
SOX1O00570 AL445685.2-201ENST00000422551 342 ntBASIC2.35□□□□□ -2.03
SOX1O00570 RNU6-322P-201ENST00000516010 103 ntBASIC2.35□□□□□ -2.03
SOX1O00570 SNORD114-10-201ENST00000363409 72 ntBASIC2.34□□□□□ -2.03
SOX1O00570 RNA5SP190-201ENST00000365222 118 ntBASIC2.34□□□□□ -2.03
SOX1O00570 SNORD38B-201ENST00000384690 67 ntBASIC2.34□□□□□ -2.03
SOX1O00570 MIR194-1-201ENST00000384892 85 ntBASIC2.34□□□□□ -2.03
SOX1O00570 RNU6-447P-201ENST00000410293 104 ntBASIC2.34□□□□□ -2.03
SOX1O00570 RNU6-1118P-201ENST00000410382 104 ntBASIC2.34□□□□□ -2.03
SOX1O00570 RNU6-1076P-201ENST00000410397 104 ntBASIC2.34□□□□□ -2.03
SOX1O00570 RNU6-355P-201ENST00000410427 104 ntBASIC2.34□□□□□ -2.03
SOX1O00570 RNU6-791P-201ENST00000410467 104 ntBASIC2.34□□□□□ -2.03
SOX1O00570 RNU6-705P-201ENST00000410601 104 ntBASIC2.34□□□□□ -2.03
SOX1O00570 RNU6-402P-201ENST00000410678 103 ntBASIC2.34□□□□□ -2.03
SOX1O00570 RNU6-1100P-201ENST00000410691 104 ntBASIC2.34□□□□□ -2.03
SOX1O00570 RNU6-860P-201ENST00000410860 104 ntBASIC2.34□□□□□ -2.03
SOX1O00570 RNU6-1217P-201ENST00000411276 104 ntBASIC2.34□□□□□ -2.03
SOX1O00570 RNU6-785P-201ENST00000411324 104 ntBASIC2.34□□□□□ -2.03
SOX1O00570 RPS29P28-201ENST00000446439 141 ntBASIC2.34□□□□□ -2.03
SOX1O00570 SNORD67.1-201ENST00000516618 108 ntBASIC2.34□□□□□ -2.03
SOX1O00570 SNORA31.15-201ENST00000516771 132 ntBASIC2.34□□□□□ -2.03
SOX1O00570 RNU6-86P-201ENST00000606534 107 ntBASIC2.34□□□□□ -2.03
SOX1O00570 AC067747.1-201ENST00000608026 250 ntBASIC2.34□□□□□ -2.03
SOX1O00570 MIR6504-201ENST00000613520 61 ntBASIC2.34□□□□□ -2.03
SOX1O00570 U6.90-201ENST00000614007 104 ntBASIC2.34□□□□□ -2.03
SOX1O00570 U6.70-201ENST00000620287 104 ntBASIC2.34□□□□□ -2.03
SOX1O00570 SNORD38B-202ENST00000625943 69 ntBASIC2.34□□□□□ -2.03
SOX1O00570 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.34□□□□□ -2.03
SOX1O00570 MIR3202-2-201ENST00000635980 79 ntBASIC2.34□□□□□ -2.03
SOX1O00570 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
SOX1O00570 AC080100.1-201ENST00000624239 5356 ntBASIC2.34□□□□□ -2.04
SOX1O00570 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SOX1O00570 RNU6-1163P-201ENST00000364516 107 ntBASIC2.33□□□□□ -2.04
SOX1O00570 RNU6-865P-201ENST00000364772 107 ntBASIC2.33□□□□□ -2.04
SOX1O00570 RNU6-1276P-201ENST00000365372 104 ntBASIC2.33□□□□□ -2.04
SOX1O00570 RNU7-193P-201ENST00000516723 65 ntBASIC2.33□□□□□ -2.04
SOX1O00570 MIR548AO-201ENST00000579992 96 ntBASIC2.33□□□□□ -2.04
SOX1O00570 MIR4251-201ENST00000635819 61 ntBASIC2.33□□□□□ -2.04
SOX1O00570 RNU6-1124P-201ENST00000384169 107 ntBASIC2.32□□□□□ -2.04
SOX1O00570 MIR34C-201ENST00000384831 77 ntBASIC2.32□□□□□ -2.04
SOX1O00570 RNU6-1307P-201ENST00000391012 103 ntBASIC2.32□□□□□ -2.04
SOX1O00570 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.32□□□□□ -2.04
SOX1O00570 MIR3935-201ENST00000583472 104 ntBASIC2.32□□□□□ -2.04
SOX1O00570 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SOX1O00570 RNU6-42P-201ENST00000384165 107 ntBASIC2.31□□□□□ -2.04
SOX1O00570 Y_RNA.448-201ENST00000384185 108 ntBASIC2.31□□□□□ -2.04
SOX1O00570 MIR5092-201ENST00000583139 88 ntBASIC2.31□□□□□ -2.04
SOX1O00570 RNU6-90P-201ENST00000606352 106 ntBASIC2.31□□□□□ -2.04
SOX1O00570 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SOX1O00570 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
SOX1O00570 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
SOX1O00570 RNU6-228P-201ENST00000362700 106 ntBASIC2.3□□□□□ -2.04
SOX1O00570 Y_RNA.73-201ENST00000362910 113 ntBASIC2.3□□□□□ -2.04
SOX1O00570 Y_RNA.98-201ENST00000363109 102 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 891.8 ms