Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 SNORD123-201ENST00000459473 70 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 RNY3P15-201ENST00000516297 97 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 RNU6-504P-201ENST00000516568 104 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 RNU6-782P-201ENST00000516852 104 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 MIR5706-201ENST00000579841 80 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 MIR4801-201ENST00000582704 82 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 RPS29P30-201ENST00000600975 111 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.19-201ENST00000362462 99 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 RNU6-1309P-201ENST00000363305 108 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 RNU6-1283P-201ENST00000365314 105 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.410-201ENST00000383992 113 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 RNU6-949P-201ENST00000384040 107 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.432-201ENST00000384087 111 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.617-201ENST00000410920 90 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 MTND5P22-201ENST00000458380 195 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 SNORD2.1-201ENST00000458762 69 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 RNU6-1143P-201ENST00000516125 104 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 MIR4290-201ENST00000583807 95 ntBASIC0.06□□□□□ -2.4
COL6A6A6NMZ7 SNORD114-5-201ENST00000362928 70 ntBASIC0.05□□□□□ -2.4
COL6A6A6NMZ7 SNORD114-16-201ENST00000363044 70 ntBASIC0.05□□□□□ -2.4
COL6A6A6NMZ7 SNORD114-31-201ENST00000363219 75 ntBASIC0.05□□□□□ -2.4
COL6A6A6NMZ7 SNORA42.1-201ENST00000363515 137 ntBASIC0.05□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.199-201ENST00000364014 102 ntBASIC0.05□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.286-201ENST00000364813 102 ntBASIC0.05□□□□□ -2.4
COL6A6A6NMZ7 SNORD49B-201ENST00000365172 72 ntBASIC0.05□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.356-201ENST00000365475 113 ntBASIC0.05□□□□□ -2.4
COL6A6A6NMZ7 RNU6-597P-201ENST00000365620 102 ntBASIC0.05□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.495-201ENST00000384435 112 ntBASIC0.05□□□□□ -2.4
COL6A6A6NMZ7 RNU6-1160P-201ENST00000384546 104 ntBASIC0.05□□□□□ -2.4
COL6A6A6NMZ7 AL606845.1-201ENST00000404881 255 ntBASIC0.05□□□□□ -2.4
COL6A6A6NMZ7 AC113618.1-201ENST00000416747 285 ntBASIC0.05□□□□□ -2.4
COL6A6A6NMZ7 AC015818.7-201ENST00000428754 109 ntBASIC0.05□□□□□ -2.4
COL6A6A6NMZ7 AC087499.7-201ENST00000441958 109 ntBASIC0.05□□□□□ -2.4
COL6A6A6NMZ7 RNU6-848P-201ENST00000515948 107 ntBASIC0.05□□□□□ -2.4
COL6A6A6NMZ7 RNU6-617P-201ENST00000516147 107 ntBASIC0.05□□□□□ -2.4
COL6A6A6NMZ7 SNORD77.4-201ENST00000516158 81 ntBASIC0.05□□□□□ -2.4
COL6A6A6NMZ7 RNU6-473P-201ENST00000516164 107 ntBASIC0.05□□□□□ -2.4
COL6A6A6NMZ7 RNU6-1049P-201ENST00000516414 107 ntBASIC0.05□□□□□ -2.4
COL6A6A6NMZ7 RNA5SP94-201ENST00000516917 108 ntBASIC0.05□□□□□ -2.4
COL6A6A6NMZ7 RNU6-1137P-201ENST00000517073 99 ntBASIC0.05□□□□□ -2.4
COL6A6A6NMZ7 MIR4680-201ENST00000580906 66 ntBASIC0.05□□□□□ -2.4
COL6A6A6NMZ7 MIR4423-201ENST00000580922 80 ntBASIC0.05□□□□□ -2.4
COL6A6A6NMZ7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.05□□□□□ -2.4
COL6A6A6NMZ7 AC010332.2-201ENST00000613083 1904 ntBASIC0.05□□□□□ -2.4
COL6A6A6NMZ7 RNU6-770P-201ENST00000363929 105 ntBASIC0.04□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.241-201ENST00000364470 117 ntBASIC0.04□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.292-201ENST00000364904 97 ntBASIC0.04□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.357-201ENST00000365487 109 ntBASIC0.04□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.468-201ENST00000384298 102 ntBASIC0.04□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.536-201ENST00000384621 113 ntBASIC0.04□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.568-201ENST00000384742 113 ntBASIC0.04□□□□□ -2.4
COL6A6A6NMZ7 MIR616-201ENST00000385293 97 ntBASIC0.04□□□□□ -2.4
COL6A6A6NMZ7 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.04□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.65-201ENST00000362846 100 ntBASIC0.04□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.153-201ENST00000363615 91 ntBASIC0.04□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.174-201ENST00000363781 105 ntBASIC0.04□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.217-201ENST00000364214 105 ntBASIC0.04□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.277-201ENST00000364754 102 ntBASIC0.04□□□□□ -2.4
COL6A6A6NMZ7 SNORD114-3-201ENST00000364969 75 ntBASIC0.04□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.376-201ENST00000365638 108 ntBASIC0.04□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.447-201ENST00000384184 113 ntBASIC0.04□□□□□ -2.4
COL6A6A6NMZ7 SNORA18-201ENST00000384416 132 ntBASIC0.04□□□□□ -2.4
COL6A6A6NMZ7 SNORD28-201ENST00000384706 75 ntBASIC0.04□□□□□ -2.4
COL6A6A6NMZ7 MIR938-201ENST00000401216 83 ntBASIC0.04□□□□□ -2.4
COL6A6A6NMZ7 RNU5E-9P-201ENST00000411164 104 ntBASIC0.04□□□□□ -2.4
COL6A6A6NMZ7 ELOCP20-201ENST00000422460 345 ntBASIC0.04□□□□□ -2.4
COL6A6A6NMZ7 RNU7-159P-201ENST00000459284 62 ntBASIC0.04□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.641-201ENST00000459414 105 ntBASIC0.04□□□□□ -2.4
COL6A6A6NMZ7 AC133485.4-201ENST00000561835 220 ntBASIC0.04□□□□□ -2.4
COL6A6A6NMZ7 AC138907.4-201ENST00000570107 226 ntBASIC0.04□□□□□ -2.4
COL6A6A6NMZ7 AC044792.1-201ENST00000593294 196 ntBASIC0.04□□□□□ -2.4
COL6A6A6NMZ7 MIRLET7D-201ENST00000362263 87 ntBASIC0.03□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.158-201ENST00000363651 101 ntBASIC0.03□□□□□ -2.4
COL6A6A6NMZ7 RNU6-806P-201ENST00000365147 105 ntBASIC0.03□□□□□ -2.4
COL6A6A6NMZ7 RNU6-1292P-201ENST00000383856 107 ntBASIC0.03□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.389-201ENST00000383924 113 ntBASIC0.03□□□□□ -2.4
COL6A6A6NMZ7 RNU6-474P-201ENST00000384243 107 ntBASIC0.03□□□□□ -2.4
COL6A6A6NMZ7 RNU6-1321P-201ENST00000390905 107 ntBASIC0.03□□□□□ -2.4
COL6A6A6NMZ7 RNU2-59P-201ENST00000410482 191 ntBASIC0.03□□□□□ -2.4
COL6A6A6NMZ7 RNU6-1203P-201ENST00000410703 110 ntBASIC0.03□□□□□ -2.4
COL6A6A6NMZ7 RNU7-113P-201ENST00000459273 62 ntBASIC0.03□□□□□ -2.4
COL6A6A6NMZ7 RNA5SP268-201ENST00000516828 124 ntBASIC0.03□□□□□ -2.4
COL6A6A6NMZ7 AC112693.2-201ENST00000556538 232 ntBASIC0.03□□□□□ -2.4
COL6A6A6NMZ7 MIR3612-201ENST00000579753 87 ntBASIC0.03□□□□□ -2.4
COL6A6A6NMZ7 MIR5197-201ENST00000583721 112 ntBASIC0.03□□□□□ -2.4
COL6A6A6NMZ7 MIR548AD-201ENST00000584780 82 ntBASIC0.03□□□□□ -2.4
COL6A6A6NMZ7 AL356055.1-201ENST00000602528 446 ntBASIC0.03□□□□□ -2.4
COL6A6A6NMZ7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.03□□□□□ -2.4
COL6A6A6NMZ7 snoU18.1-201ENST00000629629 71 ntBASIC0.03□□□□□ -2.4
COL6A6A6NMZ7 AL596211.1-201ENST00000569873 2277 ntBASIC0.03□□□□□ -2.4
COL6A6A6NMZ7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.26-201ENST00000362539 101 ntBASIC0.03□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.64-201ENST00000362845 102 ntBASIC0.03□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.82-201ENST00000363000 102 ntBASIC0.03□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.92-201ENST00000363043 102 ntBASIC0.03□□□□□ -2.4
COL6A6A6NMZ7 RNU4-10P-201ENST00000364383 140 ntBASIC0.03□□□□□ -2.4
COL6A6A6NMZ7 Y_RNA.235-201ENST00000364412 102 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 205 ms