Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 WWP1P1-201ENST00000466609 2769 ntBASIC2.13□□□□□ -2.07
U3KQE9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
U3KQE9 RNU6-949P-201ENST00000384040 107 ntBASIC2.13□□□□□ -2.07
U3KQE9 SNORA2B-201ENST00000384583 137 ntBASIC2.13□□□□□ -2.07
U3KQE9 RNU6-613P-201ENST00000410412 108 ntBASIC2.13□□□□□ -2.07
U3KQE9 AC004965.1-201ENST00000413033 213 ntBASIC2.13□□□□□ -2.07
U3KQE9 RN7SL499P-201ENST00000481141 276 ntBASIC2.13□□□□□ -2.07
U3KQE9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.13□□□□□ -2.07
U3KQE9 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.13□□□□□ -2.07
U3KQE9 MIR4325-201ENST00000583049 90 ntBASIC2.13□□□□□ -2.07
U3KQE9 MIR92B-201ENST00000607575 96 ntBASIC2.13□□□□□ -2.07
U3KQE9 AC105081.1-201ENST00000617727 106 ntBASIC2.13□□□□□ -2.07
U3KQE9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
U3KQE9 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
U3KQE9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.13□□□□□ -2.07
U3KQE9 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
U3KQE9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
U3KQE9 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
U3KQE9 VTRNA1-1-201ENST00000363120 99 ntBASIC2.12□□□□□ -2.07
U3KQE9 RNA5SP133-201ENST00000363368 119 ntBASIC2.12□□□□□ -2.07
U3KQE9 MIR181B2-201ENST00000385004 89 ntBASIC2.12□□□□□ -2.07
U3KQE9 EEF1A1P41-201ENST00000414667 207 ntBASIC2.12□□□□□ -2.07
U3KQE9 SNORA31.25-201ENST00000517242 134 ntBASIC2.12□□□□□ -2.07
U3KQE9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.12□□□□□ -2.07
U3KQE9 DEFB122-202ENST00000569013 197 ntBASIC2.12□□□□□ -2.07
U3KQE9 AL357312.1-201ENST00000603879 298 ntBASIC2.12□□□□□ -2.07
U3KQE9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
U3KQE9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
U3KQE9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
U3KQE9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
U3KQE9 RNU6-519P-201ENST00000410590 108 ntBASIC2.11□□□□□ -2.07
U3KQE9 RNU6-65P-201ENST00000516332 98 ntBASIC2.11□□□□□ -2.07
U3KQE9 SNORD111.1-201ENST00000516421 86 ntBASIC2.11□□□□□ -2.07
U3KQE9 MIR4712-201ENST00000583750 82 ntBASIC2.11□□□□□ -2.07
U3KQE9 MIR8066-201ENST00000617280 78 ntBASIC2.11□□□□□ -2.07
U3KQE9 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
U3KQE9 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
U3KQE9 RNU6-315P-201ENST00000362666 107 ntBASIC2.1□□□□□ -2.07
U3KQE9 SNORD46.1-201ENST00000364139 104 ntBASIC2.1□□□□□ -2.07
U3KQE9 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
U3KQE9 MIR4446-201ENST00000578505 67 ntBASIC2.1□□□□□ -2.07
U3KQE9 AL512598.1-201ENST00000610158 273 ntBASIC2.1□□□□□ -2.07
U3KQE9 AL162274.2-201ENST00000614406 332 ntBASIC2.1□□□□□ -2.07
U3KQE9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.1□□□□□ -2.07
U3KQE9 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
U3KQE9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.1□□□□□ -2.07
U3KQE9 Y_RNA.94-201ENST00000363068 106 ntBASIC2.09□□□□□ -2.07
U3KQE9 SNORA44-201ENST00000384584 132 ntBASIC2.09□□□□□ -2.07
U3KQE9 MIR1236-201ENST00000408340 102 ntBASIC2.09□□□□□ -2.07
U3KQE9 AL161935.2-201ENST00000414627 60 ntBASIC2.09□□□□□ -2.07
U3KQE9 SNRPGP12-201ENST00000449481 213 ntBASIC2.09□□□□□ -2.07
U3KQE9 snoU13.2-201ENST00000459201 104 ntBASIC2.09□□□□□ -2.07
U3KQE9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.09□□□□□ -2.07
U3KQE9 RNU7-41P-201ENST00000515917 61 ntBASIC2.09□□□□□ -2.07
U3KQE9 AC140658.3-201ENST00000567603 271 ntBASIC2.09□□□□□ -2.07
U3KQE9 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.09□□□□□ -2.07
U3KQE9 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.09□□□□□ -2.08
U3KQE9 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
U3KQE9 MIR208A-201ENST00000362287 71 ntBASIC2.08□□□□□ -2.08
U3KQE9 SNORD115-27-201ENST00000364430 82 ntBASIC2.08□□□□□ -2.08
U3KQE9 RNU6-203P-201ENST00000384038 104 ntBASIC2.08□□□□□ -2.08
U3KQE9 RNU6-571P-201ENST00000384128 107 ntBASIC2.08□□□□□ -2.08
U3KQE9 RNU6-524P-201ENST00000384270 107 ntBASIC2.08□□□□□ -2.08
U3KQE9 AL138827.1-201ENST00000402666 306 ntBASIC2.08□□□□□ -2.08
U3KQE9 SNORA11-201ENST00000408789 128 ntBASIC2.08□□□□□ -2.08
U3KQE9 AC009474.2-201ENST00000451383 136 ntBASIC2.08□□□□□ -2.08
U3KQE9 SNORA74D-201ENST00000516404 141 ntBASIC2.08□□□□□ -2.08
U3KQE9 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.08□□□□□ -2.08
U3KQE9 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.08□□□□□ -2.08
U3KQE9 MIR6733-201ENST00000635723 61 ntBASIC2.08□□□□□ -2.08
U3KQE9 AC080100.1-201ENST00000624239 5356 ntBASIC2.07□□□□□ -2.08
U3KQE9 RNU1-52P-201ENST00000384190 164 ntBASIC2.07□□□□□ -2.08
U3KQE9 RNU6-1237P-201ENST00000384777 107 ntBASIC2.07□□□□□ -2.08
U3KQE9 MIR563-201ENST00000385080 79 ntBASIC2.07□□□□□ -2.08
U3KQE9 MT-TN-201ENST00000387400 73 ntBASIC2.07□□□□□ -2.08
U3KQE9 AC019129.1-201ENST00000403786 261 ntBASIC2.07□□□□□ -2.08
U3KQE9 RNA5SP21-201ENST00000410917 96 ntBASIC2.07□□□□□ -2.08
U3KQE9 HMGN2P35-201ENST00000412164 270 ntBASIC2.07□□□□□ -2.08
U3KQE9 MIR4264-201ENST00000583520 66 ntBASIC2.07□□□□□ -2.08
U3KQE9 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.07□□□□□ -2.08
U3KQE9 AC067747.1-201ENST00000608026 250 ntBASIC2.07□□□□□ -2.08
U3KQE9 AC008163.1-202ENST00000636004 2889 ntBASIC2.07□□□□□ -2.08
U3KQE9 Z82195.2-201ENST00000612348 18351 ntBASIC2.06□□□□□ -2.08
U3KQE9 AC027119.1-201ENST00000440877 241 ntBASIC2.06□□□□□ -2.08
U3KQE9 JTBP1-201ENST00000441314 247 ntBASIC2.06□□□□□ -2.08
U3KQE9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.06□□□□□ -2.08
U3KQE9 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
U3KQE9 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
U3KQE9 RNU1-112P-201ENST00000364401 164 ntBASIC2.05□□□□□ -2.08
U3KQE9 RNU6-396P-201ENST00000365369 105 ntBASIC2.05□□□□□ -2.08
U3KQE9 MIR513A1-201ENST00000385138 129 ntBASIC2.05□□□□□ -2.08
U3KQE9 MIR9-1-201ENST00000385198 89 ntBASIC2.05□□□□□ -2.08
U3KQE9 AC087499.2-201ENST00000432861 149 ntBASIC2.05□□□□□ -2.08
U3KQE9 AC087499.7-201ENST00000441958 109 ntBASIC2.05□□□□□ -2.08
U3KQE9 AC121758.2-201ENST00000553271 193 ntBASIC2.05□□□□□ -2.08
U3KQE9 GTF3AP2-201ENST00000557014 266 ntBASIC2.05□□□□□ -2.08
U3KQE9 SNORA4-201ENST00000584302 138 ntBASIC2.05□□□□□ -2.08
U3KQE9 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.05□□□□□ -2.08
U3KQE9 RNA5SP212-201ENST00000391223 107 ntBASIC2.04□□□□□ -2.08
U3KQE9 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 231.3 ms