Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 AL022718.1-201ENST00000412004 84 ntBASIC1.48□□□□□ -2.17
NIPSNAP3AQ9UFN0 RN7SKP19-201ENST00000516016 252 ntBASIC1.48□□□□□ -2.17
NIPSNAP3AQ9UFN0 RNU6-406P-201ENST00000516470 107 ntBASIC1.48□□□□□ -2.17
NIPSNAP3AQ9UFN0 MIR3683-201ENST00000580847 82 ntBASIC1.48□□□□□ -2.17
NIPSNAP3AQ9UFN0 Y_RNA.71-201ENST00000362892 104 ntBASIC1.47□□□□□ -2.17
NIPSNAP3AQ9UFN0 RNA5SP99-201ENST00000364020 114 ntBASIC1.47□□□□□ -2.17
NIPSNAP3AQ9UFN0 Y_RNA.354-201ENST00000365448 111 ntBASIC1.47□□□□□ -2.17
NIPSNAP3AQ9UFN0 Y_RNA.430-201ENST00000384081 110 ntBASIC1.47□□□□□ -2.17
NIPSNAP3AQ9UFN0 RNU6-910P-201ENST00000390844 107 ntBASIC1.47□□□□□ -2.17
NIPSNAP3AQ9UFN0 MIR1304-201ENST00000408243 91 ntBASIC1.47□□□□□ -2.17
NIPSNAP3AQ9UFN0 RNU6-602P-201ENST00000411155 105 ntBASIC1.47□□□□□ -2.17
NIPSNAP3AQ9UFN0 POLR2J4-204ENST00000418424 324 ntBASIC1.47□□□□□ -2.17
NIPSNAP3AQ9UFN0 RNU1-98P-201ENST00000458992 160 ntBASIC1.47□□□□□ -2.17
NIPSNAP3AQ9UFN0 RNU11-2P-201ENST00000516898 142 ntBASIC1.47□□□□□ -2.17
NIPSNAP3AQ9UFN0 BX248123.2-201ENST00000606318 124 ntBASIC1.47□□□□□ -2.17
NIPSNAP3AQ9UFN0 MIR6516-201ENST00000630554 81 ntBASIC1.47□□□□□ -2.17
NIPSNAP3AQ9UFN0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
NIPSNAP3AQ9UFN0 Y_RNA.218-201ENST00000364218 104 ntBASIC1.46□□□□□ -2.18
NIPSNAP3AQ9UFN0 Y_RNA.330-201ENST00000365230 109 ntBASIC1.46□□□□□ -2.18
NIPSNAP3AQ9UFN0 RNU7-107P-201ENST00000459121 61 ntBASIC1.46□□□□□ -2.18
NIPSNAP3AQ9UFN0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.46□□□□□ -2.18
NIPSNAP3AQ9UFN0 AP000753.3-201ENST00000604083 169 ntBASIC1.46□□□□□ -2.18
NIPSNAP3AQ9UFN0 MIR6841-201ENST00000637129 72 ntBASIC1.46□□□□□ -2.18
NIPSNAP3AQ9UFN0 Y_RNA.298-201ENST00000364960 107 ntBASIC1.45□□□□□ -2.18
NIPSNAP3AQ9UFN0 SNORA19-201ENST00000384737 128 ntBASIC1.45□□□□□ -2.18
NIPSNAP3AQ9UFN0 MIR320A-201ENST00000385302 82 ntBASIC1.45□□□□□ -2.18
NIPSNAP3AQ9UFN0 MIR1263-201ENST00000408324 86 ntBASIC1.45□□□□□ -2.18
NIPSNAP3AQ9UFN0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.45□□□□□ -2.18
NIPSNAP3AQ9UFN0 RNU7-113P-201ENST00000459273 62 ntBASIC1.45□□□□□ -2.18
NIPSNAP3AQ9UFN0 RNU7-123P-201ENST00000515911 60 ntBASIC1.45□□□□□ -2.18
NIPSNAP3AQ9UFN0 RNA5SP458-201ENST00000516188 119 ntBASIC1.45□□□□□ -2.18
NIPSNAP3AQ9UFN0 RNU2-35P-201ENST00000516446 142 ntBASIC1.45□□□□□ -2.18
NIPSNAP3AQ9UFN0 RNY4P20-201ENST00000516678 93 ntBASIC1.45□□□□□ -2.18
NIPSNAP3AQ9UFN0 IGKV1-22-201ENST00000524313 326 ntBASIC1.45□□□□□ -2.18
NIPSNAP3AQ9UFN0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.45□□□□□ -2.18
NIPSNAP3AQ9UFN0 AL157777.2-201ENST00000258070 137 ntBASIC1.44□□□□□ -2.18
NIPSNAP3AQ9UFN0 RNU1-17P-201ENST00000363022 152 ntBASIC1.44□□□□□ -2.18
NIPSNAP3AQ9UFN0 Y_RNA.171-201ENST00000363760 102 ntBASIC1.44□□□□□ -2.18
NIPSNAP3AQ9UFN0 RNU6-1117P-201ENST00000384525 104 ntBASIC1.44□□□□□ -2.18
NIPSNAP3AQ9UFN0 MIR222-201ENST00000384992 110 ntBASIC1.44□□□□□ -2.18
NIPSNAP3AQ9UFN0 SNORA75.2-201ENST00000391138 150 ntBASIC1.44□□□□□ -2.18
NIPSNAP3AQ9UFN0 SNORA75.3-201ENST00000391231 150 ntBASIC1.44□□□□□ -2.18
NIPSNAP3AQ9UFN0 Y_RNA.617-201ENST00000410920 90 ntBASIC1.44□□□□□ -2.18
NIPSNAP3AQ9UFN0 AL606753.1-201ENST00000427435 87 ntBASIC1.44□□□□□ -2.18
NIPSNAP3AQ9UFN0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.44□□□□□ -2.18
NIPSNAP3AQ9UFN0 RNU6-772P-201ENST00000516042 105 ntBASIC1.44□□□□□ -2.18
NIPSNAP3AQ9UFN0 RNU6-781P-201ENST00000516377 101 ntBASIC1.44□□□□□ -2.18
NIPSNAP3AQ9UFN0 SNORA70.22-201ENST00000517160 124 ntBASIC1.44□□□□□ -2.18
NIPSNAP3AQ9UFN0 MIR4255-201ENST00000579351 72 ntBASIC1.44□□□□□ -2.18
NIPSNAP3AQ9UFN0 SEPT14P17-201ENST00000617978 177 ntBASIC1.44□□□□□ -2.18
NIPSNAP3AQ9UFN0 RNU6-654P-201ENST00000364373 107 ntBASIC1.43□□□□□ -2.18
NIPSNAP3AQ9UFN0 RNA5SP190-201ENST00000365222 118 ntBASIC1.43□□□□□ -2.18
NIPSNAP3AQ9UFN0 Y_RNA.363-201ENST00000365529 113 ntBASIC1.43□□□□□ -2.18
NIPSNAP3AQ9UFN0 SNORD116-14-201ENST00000383894 92 ntBASIC1.43□□□□□ -2.18
NIPSNAP3AQ9UFN0 SNORD116-17-201ENST00000383929 92 ntBASIC1.43□□□□□ -2.18
NIPSNAP3AQ9UFN0 SNORD116-15-201ENST00000384445 92 ntBASIC1.43□□□□□ -2.18
NIPSNAP3AQ9UFN0 SNORD116-19-201ENST00000384729 92 ntBASIC1.43□□□□□ -2.18
NIPSNAP3AQ9UFN0 SNORD12C-201ENST00000386307 89 ntBASIC1.43□□□□□ -2.18
NIPSNAP3AQ9UFN0 RNU6-205P-201ENST00000390858 107 ntBASIC1.43□□□□□ -2.18
NIPSNAP3AQ9UFN0 AL591704.2-201ENST00000421658 181 ntBASIC1.43□□□□□ -2.18
NIPSNAP3AQ9UFN0 RN7SKP179-201ENST00000516126 217 ntBASIC1.43□□□□□ -2.18
NIPSNAP3AQ9UFN0 RNU6-1333P-201ENST00000516162 93 ntBASIC1.43□□□□□ -2.18
NIPSNAP3AQ9UFN0 RNA5SP327-201ENST00000362494 101 ntBASIC1.42□□□□□ -2.18
NIPSNAP3AQ9UFN0 SNORA80D-201ENST00000384488 135 ntBASIC1.42□□□□□ -2.18
NIPSNAP3AQ9UFN0 Y_RNA.525-201ENST00000384570 113 ntBASIC1.42□□□□□ -2.18
NIPSNAP3AQ9UFN0 MT-TN-201ENST00000387400 73 ntBASIC1.42□□□□□ -2.18
NIPSNAP3AQ9UFN0 RNA5SP95-201ENST00000410319 137 ntBASIC1.42□□□□□ -2.18
NIPSNAP3AQ9UFN0 AL512326.2-201ENST00000426359 151 ntBASIC1.42□□□□□ -2.18
NIPSNAP3AQ9UFN0 AC008267.6-201ENST00000441664 139 ntBASIC1.42□□□□□ -2.18
NIPSNAP3AQ9UFN0 RNU6-62P-201ENST00000516526 102 ntBASIC1.42□□□□□ -2.18
NIPSNAP3AQ9UFN0 AC004812.1-201ENST00000540773 146 ntBASIC1.42□□□□□ -2.18
NIPSNAP3AQ9UFN0 MIR4264-201ENST00000583520 66 ntBASIC1.42□□□□□ -2.18
NIPSNAP3AQ9UFN0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.41□□□□□ -2.18
NIPSNAP3AQ9UFN0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
NIPSNAP3AQ9UFN0 Y_RNA.127-201ENST00000363386 109 ntBASIC1.41□□□□□ -2.18
NIPSNAP3AQ9UFN0 RNU1-42P-201ENST00000364033 160 ntBASIC1.41□□□□□ -2.18
NIPSNAP3AQ9UFN0 SNORD58C-201ENST00000365223 64 ntBASIC1.41□□□□□ -2.18
NIPSNAP3AQ9UFN0 Y_RNA.531-201ENST00000384589 121 ntBASIC1.41□□□□□ -2.18
NIPSNAP3AQ9UFN0 SNORA67.5-201ENST00000391036 107 ntBASIC1.41□□□□□ -2.18
NIPSNAP3AQ9UFN0 MIR1323-201ENST00000408090 73 ntBASIC1.41□□□□□ -2.18
NIPSNAP3AQ9UFN0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.41□□□□□ -2.18
NIPSNAP3AQ9UFN0 RNU6-613P-201ENST00000410412 108 ntBASIC1.41□□□□□ -2.18
NIPSNAP3AQ9UFN0 RNA5SP136-201ENST00000410906 107 ntBASIC1.41□□□□□ -2.18
NIPSNAP3AQ9UFN0 MRPL35P3-201ENST00000421557 364 ntBASIC1.41□□□□□ -2.18
NIPSNAP3AQ9UFN0 AC244023.1-201ENST00000426884 112 ntBASIC1.41□□□□□ -2.18
NIPSNAP3AQ9UFN0 AC113410.1-201ENST00000505029 247 ntBASIC1.41□□□□□ -2.18
NIPSNAP3AQ9UFN0 RNU6-1258P-201ENST00000516911 111 ntBASIC1.41□□□□□ -2.18
NIPSNAP3AQ9UFN0 AC242498.1-201ENST00000604134 111 ntBASIC1.41□□□□□ -2.18
NIPSNAP3AQ9UFN0 AL365222.1-201ENST00000614661 98 ntBASIC1.41□□□□□ -2.18
NIPSNAP3AQ9UFN0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
NIPSNAP3AQ9UFN0 SNORD79.1-201ENST00000516069 84 ntBASIC1.4□□□□□ -2.19
NIPSNAP3AQ9UFN0 RNU6-659P-201ENST00000516454 104 ntBASIC1.4□□□□□ -2.19
NIPSNAP3AQ9UFN0 RNA5SP33-201ENST00000516687 98 ntBASIC1.4□□□□□ -2.19
NIPSNAP3AQ9UFN0 AC025166.1-201ENST00000612411 163 ntBASIC1.4□□□□□ -2.19
NIPSNAP3AQ9UFN0 U2.22-201ENST00000636441 106 ntBASIC1.4□□□□□ -2.19
NIPSNAP3AQ9UFN0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
NIPSNAP3AQ9UFN0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.4□□□□□ -2.19
NIPSNAP3AQ9UFN0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
NIPSNAP3AQ9UFN0 Y_RNA.140-201ENST00000363474 103 ntBASIC1.39□□□□□ -2.19
NIPSNAP3AQ9UFN0 RNU6-22P-201ENST00000384355 107 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 325.1 ms