Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 SNORA25.12-201ENST00000516202 82 ntBASIC1.01□□□□□ -2.25
SIX2Q9NPC8 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.01□□□□□ -2.25
SIX2Q9NPC8 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.01□□□□□ -2.25
SIX2Q9NPC8 AL359821.1-201ENST00000605519 182 ntBASIC1.01□□□□□ -2.25
SIX2Q9NPC8 SEPT14P17-201ENST00000617978 177 ntBASIC1.01□□□□□ -2.25
SIX2Q9NPC8 SNORA1.1-201ENST00000364671 133 ntBASIC1□□□□□ -2.25
SIX2Q9NPC8 Y_RNA.338-201ENST00000365320 114 ntBASIC1□□□□□ -2.25
SIX2Q9NPC8 RNU6-396P-201ENST00000365369 105 ntBASIC1□□□□□ -2.25
SIX2Q9NPC8 SNORA80D-201ENST00000384488 135 ntBASIC1□□□□□ -2.25
SIX2Q9NPC8 RNU6-125P-201ENST00000384505 107 ntBASIC1□□□□□ -2.25
SIX2Q9NPC8 MIR569-201ENST00000385228 96 ntBASIC1□□□□□ -2.25
SIX2Q9NPC8 SNORD12-201ENST00000391002 90 ntBASIC1□□□□□ -2.25
SIX2Q9NPC8 RNU6-460P-201ENST00000391158 108 ntBASIC1□□□□□ -2.25
SIX2Q9NPC8 MTATP6P21-201ENST00000440681 189 ntBASIC1□□□□□ -2.25
SIX2Q9NPC8 RNU7-21P-201ENST00000459430 62 ntBASIC1□□□□□ -2.25
SIX2Q9NPC8 RNU7-45P-201ENST00000459460 63 ntBASIC1□□□□□ -2.25
SIX2Q9NPC8 AC108729.3-201ENST00000513484 108 ntBASIC1□□□□□ -2.25
SIX2Q9NPC8 Y_RNA.686-201ENST00000516548 134 ntBASIC1□□□□□ -2.25
SIX2Q9NPC8 MIR2115-201ENST00000516657 100 ntBASIC1□□□□□ -2.25
SIX2Q9NPC8 AC027335.2-201ENST00000624030 375 ntBASIC1□□□□□ -2.25
SIX2Q9NPC8 MIR6516-201ENST00000630554 81 ntBASIC1□□□□□ -2.25
SIX2Q9NPC8 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.99□□□□□ -2.25
SIX2Q9NPC8 RNU6-654P-201ENST00000364373 107 ntBASIC0.99□□□□□ -2.25
SIX2Q9NPC8 RNY1P6-201ENST00000384193 109 ntBASIC0.99□□□□□ -2.25
SIX2Q9NPC8 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
SIX2Q9NPC8 RNU6-613P-201ENST00000410412 108 ntBASIC0.99□□□□□ -2.25
SIX2Q9NPC8 AC019288.1-201ENST00000557918 224 ntBASIC0.99□□□□□ -2.25
SIX2Q9NPC8 MIR6717-201ENST00000622747 73 ntBASIC0.99□□□□□ -2.25
SIX2Q9NPC8 AC091895.1-201ENST00000624494 256 ntBASIC0.99□□□□□ -2.25
SIX2Q9NPC8 RNU6-349P-201ENST00000362402 107 ntBASIC0.98□□□□□ -2.25
SIX2Q9NPC8 SNORD18B-201ENST00000365659 72 ntBASIC0.98□□□□□ -2.25
SIX2Q9NPC8 Y_RNA.488-201ENST00000384403 102 ntBASIC0.98□□□□□ -2.25
SIX2Q9NPC8 MIR222-201ENST00000384992 110 ntBASIC0.98□□□□□ -2.25
SIX2Q9NPC8 MT-TN-201ENST00000387400 73 ntBASIC0.98□□□□□ -2.25
SIX2Q9NPC8 RNU6-1319P-201ENST00000390855 104 ntBASIC0.98□□□□□ -2.25
SIX2Q9NPC8 RNU6-747P-201ENST00000390928 104 ntBASIC0.98□□□□□ -2.25
SIX2Q9NPC8 RNU6-241P-201ENST00000391148 104 ntBASIC0.98□□□□□ -2.25
SIX2Q9NPC8 AL603914.1-201ENST00000401964 204 ntBASIC0.98□□□□□ -2.25
SIX2Q9NPC8 RNA5SP261-201ENST00000410536 106 ntBASIC0.98□□□□□ -2.25
SIX2Q9NPC8 RNU6-602P-201ENST00000411155 105 ntBASIC0.98□□□□□ -2.25
SIX2Q9NPC8 RNU6-177P-201ENST00000411257 104 ntBASIC0.98□□□□□ -2.25
SIX2Q9NPC8 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.98□□□□□ -2.25
SIX2Q9NPC8 HSPE1P19-201ENST00000603327 295 ntBASIC0.98□□□□□ -2.25
SIX2Q9NPC8 AC021613.1-201ENST00000623880 111 ntBASIC0.98□□□□□ -2.25
SIX2Q9NPC8 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
SIX2Q9NPC8 RNU6-508P-201ENST00000363231 103 ntBASIC0.97□□□□□ -2.25
SIX2Q9NPC8 RNU4-16P-201ENST00000364737 141 ntBASIC0.97□□□□□ -2.25
SIX2Q9NPC8 RNU6-915P-201ENST00000364943 103 ntBASIC0.97□□□□□ -2.25
SIX2Q9NPC8 Y_RNA.330-201ENST00000365230 109 ntBASIC0.97□□□□□ -2.25
SIX2Q9NPC8 SNORA22-201ENST00000383907 134 ntBASIC0.97□□□□□ -2.25
SIX2Q9NPC8 Y_RNA.420-201ENST00000384043 110 ntBASIC0.97□□□□□ -2.25
SIX2Q9NPC8 Y_RNA.430-201ENST00000384081 110 ntBASIC0.97□□□□□ -2.25
SIX2Q9NPC8 SNORA22C-201ENST00000384614 134 ntBASIC0.97□□□□□ -2.25
SIX2Q9NPC8 SNORD38B-201ENST00000384690 67 ntBASIC0.97□□□□□ -2.25
SIX2Q9NPC8 RPS3AP1-201ENST00000413190 320 ntBASIC0.97□□□□□ -2.25
SIX2Q9NPC8 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.97□□□□□ -2.25
SIX2Q9NPC8 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.97□□□□□ -2.25
SIX2Q9NPC8 RNU7-90P-201ENST00000459216 62 ntBASIC0.97□□□□□ -2.25
SIX2Q9NPC8 Y_RNA.651-201ENST00000459380 103 ntBASIC0.97□□□□□ -2.25
SIX2Q9NPC8 RNU6-1053P-201ENST00000515930 101 ntBASIC0.97□□□□□ -2.25
SIX2Q9NPC8 RNU6-346P-201ENST00000516288 111 ntBASIC0.97□□□□□ -2.25
SIX2Q9NPC8 RNU6-426P-201ENST00000516464 97 ntBASIC0.97□□□□□ -2.25
SIX2Q9NPC8 Y_RNA.690-201ENST00000516603 95 ntBASIC0.97□□□□□ -2.25
SIX2Q9NPC8 AC011603.4-201ENST00000611325 277 ntBASIC0.97□□□□□ -2.25
SIX2Q9NPC8 SNORD38B-202ENST00000625943 69 ntBASIC0.97□□□□□ -2.25
SIX2Q9NPC8 MIR6841-201ENST00000637129 72 ntBASIC0.97□□□□□ -2.25
SIX2Q9NPC8 MIR6767-201ENST00000637302 66 ntBASIC0.97□□□□□ -2.25
SIX2Q9NPC8 AC008163.1-202ENST00000636004 2889 ntBASIC0.96□□□□□ -2.26
SIX2Q9NPC8 MIR377-201ENST00000362145 69 ntBASIC0.96□□□□□ -2.26
SIX2Q9NPC8 RNU6-309P-201ENST00000364573 106 ntBASIC0.96□□□□□ -2.26
SIX2Q9NPC8 MIR532-201ENST00000385025 91 ntBASIC0.96□□□□□ -2.26
SIX2Q9NPC8 RNA5SP95-201ENST00000410319 137 ntBASIC0.96□□□□□ -2.26
SIX2Q9NPC8 AC063976.4-201ENST00000421971 163 ntBASIC0.96□□□□□ -2.26
SIX2Q9NPC8 AC244023.1-201ENST00000426884 112 ntBASIC0.96□□□□□ -2.26
SIX2Q9NPC8 AC002429.1-201ENST00000437672 148 ntBASIC0.96□□□□□ -2.26
SIX2Q9NPC8 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.96□□□□□ -2.26
SIX2Q9NPC8 MIR3152-201ENST00000579801 74 ntBASIC0.96□□□□□ -2.26
SIX2Q9NPC8 MIR4264-201ENST00000583520 66 ntBASIC0.96□□□□□ -2.26
SIX2Q9NPC8 AC242498.1-201ENST00000604134 111 ntBASIC0.96□□□□□ -2.26
SIX2Q9NPC8 AP001340.1-201ENST00000624405 217 ntBASIC0.96□□□□□ -2.26
SIX2Q9NPC8 SNORA20-201ENST00000384662 132 ntBASIC0.95□□□□□ -2.26
SIX2Q9NPC8 MIR19B1-201ENST00000384829 87 ntBASIC0.95□□□□□ -2.26
SIX2Q9NPC8 RNU6-321P-201ENST00000410912 106 ntBASIC0.95□□□□□ -2.26
SIX2Q9NPC8 RNA5SP272-201ENST00000516095 111 ntBASIC0.95□□□□□ -2.26
SIX2Q9NPC8 RNU6-113P-201ENST00000516653 101 ntBASIC0.95□□□□□ -2.26
SIX2Q9NPC8 Y_RNA.703-201ENST00000516846 111 ntBASIC0.95□□□□□ -2.26
SIX2Q9NPC8 AP001328.1-201ENST00000528550 176 ntBASIC0.95□□□□□ -2.26
SIX2Q9NPC8 MIR3973-201ENST00000579824 107 ntBASIC0.95□□□□□ -2.26
SIX2Q9NPC8 AP000753.3-201ENST00000604083 169 ntBASIC0.95□□□□□ -2.26
SIX2Q9NPC8 FAM71BP1-201ENST00000604431 523 ntBASIC0.95□□□□□ -2.26
SIX2Q9NPC8 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.95□□□□□ -2.26
SIX2Q9NPC8 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
SIX2Q9NPC8 SNORA22.1-201ENST00000362701 134 ntBASIC0.94□□□□□ -2.26
SIX2Q9NPC8 Y_RNA.168-201ENST00000363740 102 ntBASIC0.94□□□□□ -2.26
SIX2Q9NPC8 SNORD114-27-201ENST00000363766 70 ntBASIC0.94□□□□□ -2.26
SIX2Q9NPC8 SNORA25.8-201ENST00000364831 128 ntBASIC0.94□□□□□ -2.26
SIX2Q9NPC8 RNU6-690P-201ENST00000365242 106 ntBASIC0.94□□□□□ -2.26
SIX2Q9NPC8 RNU6-205P-201ENST00000390858 107 ntBASIC0.94□□□□□ -2.26
SIX2Q9NPC8 POLR2J4-204ENST00000418424 324 ntBASIC0.94□□□□□ -2.26
SIX2Q9NPC8 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms