Protein–RNA interactions for Protein: Q9N2J8

HERV-H_2q24.1 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2J8 MIR378A-201ENST00000362177 66 ntBASIC1.18□□□□□ -2.22
Q9N2J8 Y_RNA.330-201ENST00000365230 109 ntBASIC1.18□□□□□ -2.22
Q9N2J8 Y_RNA.354-201ENST00000365448 111 ntBASIC1.18□□□□□ -2.22
Q9N2J8 SNORA40.6-201ENST00000391153 128 ntBASIC1.18□□□□□ -2.22
Q9N2J8 SNORA26.6-201ENST00000391256 115 ntBASIC1.18□□□□□ -2.22
Q9N2J8 MRPL35P3-201ENST00000421557 364 ntBASIC1.18□□□□□ -2.22
Q9N2J8 AC004223.1-201ENST00000479840 271 ntBASIC1.18□□□□□ -2.22
Q9N2J8 RNU6-237P-201ENST00000515985 71 ntBASIC1.18□□□□□ -2.22
Q9N2J8 Y_RNA.703-201ENST00000516846 111 ntBASIC1.18□□□□□ -2.22
Q9N2J8 AP001328.1-201ENST00000528550 176 ntBASIC1.18□□□□□ -2.22
Q9N2J8 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Q9N2J8 RNU6-690P-201ENST00000365242 106 ntBASIC1.17□□□□□ -2.22
Q9N2J8 Y_RNA.430-201ENST00000384081 110 ntBASIC1.17□□□□□ -2.22
Q9N2J8 RNU6-125P-201ENST00000384505 107 ntBASIC1.17□□□□□ -2.22
Q9N2J8 AC090844.1-201ENST00000422019 156 ntBASIC1.17□□□□□ -2.22
Q9N2J8 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.17□□□□□ -2.22
Q9N2J8 RNU6-893P-201ENST00000458841 100 ntBASIC1.17□□□□□ -2.22
Q9N2J8 RNU7-90P-201ENST00000459216 62 ntBASIC1.17□□□□□ -2.22
Q9N2J8 RNU6-346P-201ENST00000516288 111 ntBASIC1.17□□□□□ -2.22
Q9N2J8 RNU6-426P-201ENST00000516464 97 ntBASIC1.17□□□□□ -2.22
Q9N2J8 Y_RNA.692-201ENST00000516627 105 ntBASIC1.17□□□□□ -2.22
Q9N2J8 AC068338.1-201ENST00000565567 176 ntBASIC1.17□□□□□ -2.22
Q9N2J8 MIR4264-201ENST00000583520 66 ntBASIC1.17□□□□□ -2.22
Q9N2J8 MIR4769-201ENST00000584126 77 ntBASIC1.17□□□□□ -2.22
Q9N2J8 MIR3660-201ENST00000584845 100 ntBASIC1.17□□□□□ -2.22
Q9N2J8 AC027335.2-201ENST00000624030 375 ntBASIC1.17□□□□□ -2.22
Q9N2J8 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Q9N2J8 RNU6-349P-201ENST00000362402 107 ntBASIC1.16□□□□□ -2.22
Q9N2J8 RNU4-16P-201ENST00000364737 141 ntBASIC1.16□□□□□ -2.22
Q9N2J8 RNU6-746P-201ENST00000384112 109 ntBASIC1.16□□□□□ -2.22
Q9N2J8 RNU6-939P-201ENST00000384634 107 ntBASIC1.16□□□□□ -2.22
Q9N2J8 RNU6-602P-201ENST00000411155 105 ntBASIC1.16□□□□□ -2.22
Q9N2J8 BTF3P4-201ENST00000418852 495 ntBASIC1.16□□□□□ -2.22
Q9N2J8 AC063976.4-201ENST00000421971 163 ntBASIC1.16□□□□□ -2.22
Q9N2J8 MIR3124-201ENST00000582636 67 ntBASIC1.16□□□□□ -2.22
Q9N2J8 AL157834.3-201ENST00000615543 103 ntBASIC1.16□□□□□ -2.22
Q9N2J8 AL353770.2-201ENST00000620024 78 ntBASIC1.16□□□□□ -2.22
Q9N2J8 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.16□□□□□ -2.22
Q9N2J8 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.16□□□□□ -2.22
Q9N2J8 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.15□□□□□ -2.23
Q9N2J8 MIR377-201ENST00000362145 69 ntBASIC1.15□□□□□ -2.23
Q9N2J8 RNU6-654P-201ENST00000364373 107 ntBASIC1.15□□□□□ -2.23
Q9N2J8 RNU6-309P-201ENST00000364573 106 ntBASIC1.15□□□□□ -2.23
Q9N2J8 Y_RNA.568-201ENST00000384742 113 ntBASIC1.15□□□□□ -2.23
Q9N2J8 AP1B1P2-201ENST00000416196 106 ntBASIC1.15□□□□□ -2.23
Q9N2J8 Y_RNA.651-201ENST00000459380 103 ntBASIC1.15□□□□□ -2.23
Q9N2J8 RNA5SP458-201ENST00000516188 119 ntBASIC1.15□□□□□ -2.23
Q9N2J8 Y_RNA.757-201ENST00000578934 114 ntBASIC1.15□□□□□ -2.23
Q9N2J8 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.15□□□□□ -2.23
Q9N2J8 MIR3133-201ENST00000583157 78 ntBASIC1.15□□□□□ -2.23
Q9N2J8 HSPE1P19-201ENST00000603327 295 ntBASIC1.15□□□□□ -2.23
Q9N2J8 AC008163.1-202ENST00000636004 2889 ntBASIC1.15□□□□□ -2.23
Q9N2J8 AC010332.2-201ENST00000613083 1904 ntBASIC1.15□□□□□ -2.23
Q9N2J8 SNORA22.1-201ENST00000362701 134 ntBASIC1.14□□□□□ -2.23
Q9N2J8 MIR548M-201ENST00000408260 86 ntBASIC1.14□□□□□ -2.23
Q9N2J8 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.14□□□□□ -2.23
Q9N2J8 RNU5E-3P-201ENST00000515913 68 ntBASIC1.14□□□□□ -2.23
Q9N2J8 U7.2-201ENST00000607576 63 ntBASIC1.14□□□□□ -2.23
Q9N2J8 MIR6841-201ENST00000637129 72 ntBASIC1.14□□□□□ -2.23
Q9N2J8 RNU6-774P-201ENST00000363238 107 ntBASIC1.13□□□□□ -2.23
Q9N2J8 Y_RNA.168-201ENST00000363740 102 ntBASIC1.13□□□□□ -2.23
Q9N2J8 AC244023.1-201ENST00000426884 112 ntBASIC1.13□□□□□ -2.23
Q9N2J8 AC002429.1-201ENST00000437672 148 ntBASIC1.13□□□□□ -2.23
Q9N2J8 RNU6-240P-201ENST00000516098 97 ntBASIC1.13□□□□□ -2.23
Q9N2J8 RNU7-40P-201ENST00000516397 64 ntBASIC1.13□□□□□ -2.23
Q9N2J8 AC133485.4-201ENST00000561835 220 ntBASIC1.13□□□□□ -2.23
Q9N2J8 AC138907.4-201ENST00000570107 226 ntBASIC1.13□□□□□ -2.23
Q9N2J8 AC242498.1-201ENST00000604134 111 ntBASIC1.13□□□□□ -2.23
Q9N2J8 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
Q9N2J8 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Q9N2J8 RNU6-508P-201ENST00000363231 103 ntBASIC1.12□□□□□ -2.23
Q9N2J8 SNORD113.3-201ENST00000364630 78 ntBASIC1.12□□□□□ -2.23
Q9N2J8 SNORA2B-201ENST00000384583 137 ntBASIC1.12□□□□□ -2.23
Q9N2J8 MIR19B1-201ENST00000384829 87 ntBASIC1.12□□□□□ -2.23
Q9N2J8 SNORA40-201ENST00000388090 126 ntBASIC1.12□□□□□ -2.23
Q9N2J8 RNU6-205P-201ENST00000390858 107 ntBASIC1.12□□□□□ -2.23
Q9N2J8 SNORD111-201ENST00000408139 94 ntBASIC1.12□□□□□ -2.23
Q9N2J8 RNA5SP95-201ENST00000410319 137 ntBASIC1.12□□□□□ -2.23
Q9N2J8 RNA5SP144-201ENST00000410846 116 ntBASIC1.12□□□□□ -2.23
Q9N2J8 AL022718.1-201ENST00000412004 84 ntBASIC1.12□□□□□ -2.23
Q9N2J8 RNA5SP272-201ENST00000516095 111 ntBASIC1.12□□□□□ -2.23
Q9N2J8 AC036111.3-201ENST00000526389 112 ntBASIC1.12□□□□□ -2.23
Q9N2J8 MIR3121-201ENST00000579680 77 ntBASIC1.12□□□□□ -2.23
Q9N2J8 TUG1_4.1-201ENST00000619464 181 ntBASIC1.12□□□□□ -2.23
Q9N2J8 SNORD50.2-201ENST00000365465 70 ntBASIC1.11□□□□□ -2.23
Q9N2J8 MIR618-201ENST00000385287 98 ntBASIC1.11□□□□□ -2.23
Q9N2J8 POLR2J4-204ENST00000418424 324 ntBASIC1.11□□□□□ -2.23
Q9N2J8 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.11□□□□□ -2.23
Q9N2J8 AC023827.1-201ENST00000569247 97 ntBASIC1.11□□□□□ -2.23
Q9N2J8 AC021443.1-201ENST00000604478 211 ntBASIC1.11□□□□□ -2.23
Q9N2J8 MIR6078-201ENST00000611069 100 ntBASIC1.11□□□□□ -2.23
Q9N2J8 AC106800.4-201ENST00000614905 153 ntBASIC1.11□□□□□ -2.23
Q9N2J8 RNU6-580P-201ENST00000365159 107 ntBASIC1.1□□□□□ -2.23
Q9N2J8 MIR613-201ENST00000385248 95 ntBASIC1.1□□□□□ -2.23
Q9N2J8 MTND4LP9-201ENST00000427694 174 ntBASIC1.1□□□□□ -2.23
Q9N2J8 RNU7-62P-201ENST00000458856 62 ntBASIC1.1□□□□□ -2.23
Q9N2J8 RN7SKP179-201ENST00000516126 217 ntBASIC1.1□□□□□ -2.23
Q9N2J8 RNA5SP404-201ENST00000517118 132 ntBASIC1.1□□□□□ -2.23
Q9N2J8 MIR4305-201ENST00000583252 102 ntBASIC1.1□□□□□ -2.23
Q9N2J8 AC091895.1-201ENST00000624494 256 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 195.5 ms