Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 Y_RNA.617-201ENST00000410920 90 ntBASIC0.28□□□□□ -2.36
TM9SF3Q9HD45 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.28□□□□□ -2.36
TM9SF3Q9HD45 MTATP8P1-201ENST00000467115 207 ntBASIC0.28□□□□□ -2.36
TM9SF3Q9HD45 AC090897.1-201ENST00000580909 226 ntBASIC0.28□□□□□ -2.36
TM9SF3Q9HD45 MIR3129-201ENST00000581095 76 ntBASIC0.28□□□□□ -2.36
TM9SF3Q9HD45 AC092634.7-201ENST00000621022 103 ntBASIC0.28□□□□□ -2.36
TM9SF3Q9HD45 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.28□□□□□ -2.36
TM9SF3Q9HD45 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
TM9SF3Q9HD45 Y_RNA.199-201ENST00000364014 102 ntBASIC0.27□□□□□ -2.37
TM9SF3Q9HD45 RNU4-67P-201ENST00000364569 141 ntBASIC0.27□□□□□ -2.37
TM9SF3Q9HD45 SNORA33.2-201ENST00000365413 134 ntBASIC0.27□□□□□ -2.37
TM9SF3Q9HD45 SNORA26.6-201ENST00000391256 115 ntBASIC0.27□□□□□ -2.37
TM9SF3Q9HD45 SNORD100-201ENST00000408573 76 ntBASIC0.27□□□□□ -2.37
TM9SF3Q9HD45 MIR18B-201ENST00000454574 71 ntBASIC0.27□□□□□ -2.37
TM9SF3Q9HD45 RNU7-96P-201ENST00000459535 64 ntBASIC0.27□□□□□ -2.37
TM9SF3Q9HD45 AL442663.2-201ENST00000554385 511 ntBASIC0.27□□□□□ -2.37
TM9SF3Q9HD45 MIR563-201ENST00000385080 79 ntBASIC0.26□□□□□ -2.37
TM9SF3Q9HD45 RNA5SP63-201ENST00000391225 112 ntBASIC0.26□□□□□ -2.37
TM9SF3Q9HD45 TRBVB-201ENST00000477100 408 ntBASIC0.26□□□□□ -2.37
TM9SF3Q9HD45 SNORA25.12-201ENST00000516202 82 ntBASIC0.26□□□□□ -2.37
TM9SF3Q9HD45 Y_RNA.681-201ENST00000516445 113 ntBASIC0.26□□□□□ -2.37
TM9SF3Q9HD45 Y_RNA.701-201ENST00000516812 110 ntBASIC0.26□□□□□ -2.37
TM9SF3Q9HD45 RNA5SP94-201ENST00000516917 108 ntBASIC0.26□□□□□ -2.37
TM9SF3Q9HD45 RNU6-238P-201ENST00000363313 106 ntBASIC0.25□□□□□ -2.37
TM9SF3Q9HD45 SNORA63C-201ENST00000364578 129 ntBASIC0.25□□□□□ -2.37
TM9SF3Q9HD45 RNU6-1327P-201ENST00000365302 105 ntBASIC0.25□□□□□ -2.37
TM9SF3Q9HD45 Y_RNA.351-201ENST00000365436 96 ntBASIC0.25□□□□□ -2.37
TM9SF3Q9HD45 Y_RNA.483-201ENST00000384380 101 ntBASIC0.25□□□□□ -2.37
TM9SF3Q9HD45 MT-TW-201ENST00000387382 68 ntBASIC0.25□□□□□ -2.37
TM9SF3Q9HD45 RNU6-1319P-201ENST00000390855 104 ntBASIC0.25□□□□□ -2.37
TM9SF3Q9HD45 RNU6-747P-201ENST00000390928 104 ntBASIC0.25□□□□□ -2.37
TM9SF3Q9HD45 RNU6-241P-201ENST00000391148 104 ntBASIC0.25□□□□□ -2.37
TM9SF3Q9HD45 RNU6-447P-201ENST00000410293 104 ntBASIC0.25□□□□□ -2.37
TM9SF3Q9HD45 RNU6-1118P-201ENST00000410382 104 ntBASIC0.25□□□□□ -2.37
TM9SF3Q9HD45 RNU6-1076P-201ENST00000410397 104 ntBASIC0.25□□□□□ -2.37
TM9SF3Q9HD45 RNU6-355P-201ENST00000410427 104 ntBASIC0.25□□□□□ -2.37
TM9SF3Q9HD45 RNU6-791P-201ENST00000410467 104 ntBASIC0.25□□□□□ -2.37
TM9SF3Q9HD45 RNU6-705P-201ENST00000410601 104 ntBASIC0.25□□□□□ -2.37
TM9SF3Q9HD45 RNU6-1100P-201ENST00000410691 104 ntBASIC0.25□□□□□ -2.37
TM9SF3Q9HD45 RNU6-860P-201ENST00000410860 104 ntBASIC0.25□□□□□ -2.37
TM9SF3Q9HD45 RNU6-1217P-201ENST00000411276 104 ntBASIC0.25□□□□□ -2.37
TM9SF3Q9HD45 RNU6-785P-201ENST00000411324 104 ntBASIC0.25□□□□□ -2.37
TM9SF3Q9HD45 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.25□□□□□ -2.37
TM9SF3Q9HD45 RNU6-1143P-201ENST00000516125 104 ntBASIC0.25□□□□□ -2.37
TM9SF3Q9HD45 AC133485.4-201ENST00000561835 220 ntBASIC0.25□□□□□ -2.37
TM9SF3Q9HD45 SNORD92-201ENST00000585078 85 ntBASIC0.25□□□□□ -2.37
TM9SF3Q9HD45 U6.90-201ENST00000614007 104 ntBASIC0.25□□□□□ -2.37
TM9SF3Q9HD45 U6.70-201ENST00000620287 104 ntBASIC0.25□□□□□ -2.37
TM9SF3Q9HD45 MIR6717-201ENST00000622747 73 ntBASIC0.25□□□□□ -2.37
TM9SF3Q9HD45 AL596211.1-201ENST00000569873 2277 ntBASIC0.25□□□□□ -2.37
TM9SF3Q9HD45 Y_RNA.202-201ENST00000364083 110 ntBASIC0.24□□□□□ -2.37
TM9SF3Q9HD45 Y_RNA.416-201ENST00000384014 113 ntBASIC0.24□□□□□ -2.37
TM9SF3Q9HD45 MIR644A-201ENST00000385262 94 ntBASIC0.24□□□□□ -2.37
TM9SF3Q9HD45 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.24□□□□□ -2.37
TM9SF3Q9HD45 SNORD93-201ENST00000408813 74 ntBASIC0.24□□□□□ -2.37
TM9SF3Q9HD45 MTCYBP6-201ENST00000441810 138 ntBASIC0.24□□□□□ -2.37
TM9SF3Q9HD45 SNORD2.1-201ENST00000458762 69 ntBASIC0.24□□□□□ -2.37
TM9SF3Q9HD45 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.24□□□□□ -2.37
TM9SF3Q9HD45 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.24□□□□□ -2.37
TM9SF3Q9HD45 MIR4643-201ENST00000577473 78 ntBASIC0.24□□□□□ -2.37
TM9SF3Q9HD45 MIR3678-201ENST00000578455 94 ntBASIC0.24□□□□□ -2.37
TM9SF3Q9HD45 AL442067.1-201ENST00000613261 223 ntBASIC0.24□□□□□ -2.37
TM9SF3Q9HD45 U2.14-201ENST00000615943 113 ntBASIC0.24□□□□□ -2.37
TM9SF3Q9HD45 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.24□□□□□ -2.37
TM9SF3Q9HD45 MIR302B-201ENST00000362188 73 ntBASIC0.23□□□□□ -2.37
TM9SF3Q9HD45 MIR518A1-201ENST00000385068 85 ntBASIC0.23□□□□□ -2.37
TM9SF3Q9HD45 RNU6-1109P-201ENST00000391187 107 ntBASIC0.23□□□□□ -2.37
TM9SF3Q9HD45 Y_RNA.590-201ENST00000410140 107 ntBASIC0.23□□□□□ -2.37
TM9SF3Q9HD45 SEPT7P4-201ENST00000437076 306 ntBASIC0.23□□□□□ -2.37
TM9SF3Q9HD45 RNU6-635P-201ENST00000516651 102 ntBASIC0.23□□□□□ -2.37
TM9SF3Q9HD45 MIR5688-201ENST00000580619 83 ntBASIC0.23□□□□□ -2.37
TM9SF3Q9HD45 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
TM9SF3Q9HD45 MIR6718-201ENST00000616153 80 ntBASIC0.23□□□□□ -2.37
TM9SF3Q9HD45 MIR8066-201ENST00000617280 78 ntBASIC0.23□□□□□ -2.37
TM9SF3Q9HD45 AL365265.1-201ENST00000621045 234 ntBASIC0.23□□□□□ -2.37
TM9SF3Q9HD45 AC091932.4-201ENST00000623386 200 ntBASIC0.23□□□□□ -2.37
TM9SF3Q9HD45 RNU6-349P-201ENST00000362402 107 ntBASIC0.22□□□□□ -2.37
TM9SF3Q9HD45 RNU6-797P-201ENST00000363101 109 ntBASIC0.22□□□□□ -2.37
TM9SF3Q9HD45 SNORD44.1-201ENST00000363202 61 ntBASIC0.22□□□□□ -2.37
TM9SF3Q9HD45 Y_RNA.410-201ENST00000383992 113 ntBASIC0.22□□□□□ -2.37
TM9SF3Q9HD45 Y_RNA.567-201ENST00000384736 106 ntBASIC0.22□□□□□ -2.37
TM9SF3Q9HD45 MIR616-201ENST00000385293 97 ntBASIC0.22□□□□□ -2.37
TM9SF3Q9HD45 RNU4-83P-201ENST00000410863 133 ntBASIC0.22□□□□□ -2.37
TM9SF3Q9HD45 SNRPGP12-201ENST00000449481 213 ntBASIC0.22□□□□□ -2.37
TM9SF3Q9HD45 AC108740.1-201ENST00000498629 225 ntBASIC0.22□□□□□ -2.37
TM9SF3Q9HD45 RNY3P16-201ENST00000516338 101 ntBASIC0.22□□□□□ -2.37
TM9SF3Q9HD45 Y_RNA.679-201ENST00000516416 91 ntBASIC0.22□□□□□ -2.37
TM9SF3Q9HD45 RNU6-448P-201ENST00000517052 107 ntBASIC0.22□□□□□ -2.37
TM9SF3Q9HD45 AC097639.2-201ENST00000603159 172 ntBASIC0.22□□□□□ -2.37
TM9SF3Q9HD45 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.22□□□□□ -2.37
TM9SF3Q9HD45 Y_RNA.13-201ENST00000362403 112 ntBASIC0.21□□□□□ -2.38
TM9SF3Q9HD45 Y_RNA.68-201ENST00000362881 102 ntBASIC0.21□□□□□ -2.38
TM9SF3Q9HD45 RNU6-403P-201ENST00000363163 104 ntBASIC0.21□□□□□ -2.38
TM9SF3Q9HD45 SNORA36.1-201ENST00000363424 132 ntBASIC0.21□□□□□ -2.38
TM9SF3Q9HD45 RNA5SP117-201ENST00000365294 118 ntBASIC0.21□□□□□ -2.38
TM9SF3Q9HD45 RNU6-639P-201ENST00000384074 107 ntBASIC0.21□□□□□ -2.38
TM9SF3Q9HD45 SNORA8.2-201ENST00000384372 139 ntBASIC0.21□□□□□ -2.38
TM9SF3Q9HD45 MT-TF-201ENST00000387314 71 ntBASIC0.21□□□□□ -2.38
TM9SF3Q9HD45 RNU6-381P-201ENST00000391259 108 ntBASIC0.21□□□□□ -2.38
TM9SF3Q9HD45 SNORA26-201ENST00000391286 122 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 238.6 ms