Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AC092435.3-201ENST00000565538 3654 ntBASIC2.87□□□□□ -1.95
HPS1Q92902 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.86□□□□□ -1.95
HPS1Q92902 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
HPS1Q92902 RNU1-70P-201ENST00000362618 164 ntBASIC2.86□□□□□ -1.95
HPS1Q92902 MIR9-2-201ENST00000384838 87 ntBASIC2.86□□□□□ -1.95
HPS1Q92902 RNU6-1254P-201ENST00000391266 104 ntBASIC2.86□□□□□ -1.95
HPS1Q92902 MIR942-201ENST00000401111 86 ntBASIC2.86□□□□□ -1.95
HPS1Q92902 SNORD88.1-201ENST00000408684 91 ntBASIC2.86□□□□□ -1.95
HPS1Q92902 AC011753.1-201ENST00000451001 220 ntBASIC2.86□□□□□ -1.95
HPS1Q92902 IGKV2-26-201ENST00000518305 343 ntBASIC2.86□□□□□ -1.95
HPS1Q92902 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.86□□□□□ -1.95
HPS1Q92902 MIR4276-201ENST00000584832 70 ntBASIC2.86□□□□□ -1.95
HPS1Q92902 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.86□□□□□ -1.95
HPS1Q92902 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
HPS1Q92902 HMGN2P39-201ENST00000398005 273 ntBASIC2.85□□□□□ -1.95
HPS1Q92902 AC019129.1-201ENST00000403786 261 ntBASIC2.85□□□□□ -1.95
HPS1Q92902 SCARNA13-201ENST00000516672 275 ntBASIC2.85□□□□□ -1.95
HPS1Q92902 MIR5680-201ENST00000577577 84 ntBASIC2.85□□□□□ -1.95
HPS1Q92902 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.85□□□□□ -1.95
HPS1Q92902 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.84□□□□□ -1.95
HPS1Q92902 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.95
HPS1Q92902 VTRNA1-1-201ENST00000363120 99 ntBASIC2.84□□□□□ -1.95
HPS1Q92902 RNU4-47P-201ENST00000410876 114 ntBASIC2.84□□□□□ -1.95
HPS1Q92902 BX276092.1-201ENST00000427368 251 ntBASIC2.84□□□□□ -1.95
HPS1Q92902 RPS29P12-201ENST00000460178 152 ntBASIC2.84□□□□□ -1.95
HPS1Q92902 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.84□□□□□ -1.95
HPS1Q92902 AC121758.2-201ENST00000553271 193 ntBASIC2.84□□□□□ -1.95
HPS1Q92902 MIR5004-201ENST00000579078 107 ntBASIC2.84□□□□□ -1.95
HPS1Q92902 MIR7112-201ENST00000616126 65 ntBASIC2.84□□□□□ -1.95
HPS1Q92902 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
HPS1Q92902 AL161431.1-201ENST00000618966 4205 ntBASIC2.83□□□□□ -1.96
HPS1Q92902 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.83□□□□□ -1.96
HPS1Q92902 RNU6-461P-201ENST00000364195 107 ntBASIC2.83□□□□□ -1.96
HPS1Q92902 MIR520A-201ENST00000384862 85 ntBASIC2.83□□□□□ -1.96
HPS1Q92902 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
HPS1Q92902 RNU6-243P-201ENST00000391140 107 ntBASIC2.83□□□□□ -1.96
HPS1Q92902 AC099513.1-201ENST00000490423 301 ntBASIC2.83□□□□□ -1.96
HPS1Q92902 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.83□□□□□ -1.96
HPS1Q92902 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.83□□□□□ -1.96
HPS1Q92902 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HPS1Q92902 Y_RNA.119-201ENST00000363301 96 ntBASIC2.82□□□□□ -1.96
HPS1Q92902 MIR516A2-201ENST00000384888 90 ntBASIC2.82□□□□□ -1.96
HPS1Q92902 MIR516A1-201ENST00000385033 90 ntBASIC2.82□□□□□ -1.96
HPS1Q92902 MIR518E-201ENST00000385252 88 ntBASIC2.82□□□□□ -1.96
HPS1Q92902 BX510359.4-201ENST00000423750 193 ntBASIC2.82□□□□□ -1.96
HPS1Q92902 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.82□□□□□ -1.96
HPS1Q92902 MIR4709-201ENST00000577272 72 ntBASIC2.82□□□□□ -1.96
HPS1Q92902 MIR4325-201ENST00000583049 90 ntBASIC2.82□□□□□ -1.96
HPS1Q92902 U6.109-201ENST00000636749 87 ntBASIC2.82□□□□□ -1.96
HPS1Q92902 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HPS1Q92902 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.81□□□□□ -1.96
HPS1Q92902 MIR424-201ENST00000362227 98 ntBASIC2.81□□□□□ -1.96
HPS1Q92902 RNU4-82P-201ENST00000362443 140 ntBASIC2.81□□□□□ -1.96
HPS1Q92902 SNORD21-201ENST00000383953 95 ntBASIC2.81□□□□□ -1.96
HPS1Q92902 MIR520C-201ENST00000385005 87 ntBASIC2.81□□□□□ -1.96
HPS1Q92902 SNORD90-201ENST00000391145 111 ntBASIC2.81□□□□□ -1.96
HPS1Q92902 RNU6-466P-201ENST00000391224 103 ntBASIC2.81□□□□□ -1.96
HPS1Q92902 RNU6-630P-201ENST00000391258 106 ntBASIC2.81□□□□□ -1.96
HPS1Q92902 RNA5SP492-201ENST00000411330 114 ntBASIC2.81□□□□□ -1.96
HPS1Q92902 MIR3935-201ENST00000583472 104 ntBASIC2.81□□□□□ -1.96
HPS1Q92902 uc_338.1-201ENST00000612113 180 ntBASIC2.81□□□□□ -1.96
HPS1Q92902 MIR4251-201ENST00000635819 61 ntBASIC2.81□□□□□ -1.96
HPS1Q92902 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HPS1Q92902 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.8□□□□□ -1.96
HPS1Q92902 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HPS1Q92902 MIRLET7F1-201ENST00000362202 87 ntBASIC2.8□□□□□ -1.96
HPS1Q92902 RNU6-330P-201ENST00000363015 107 ntBASIC2.8□□□□□ -1.96
HPS1Q92902 SNORA25.4-201ENST00000363666 124 ntBASIC2.8□□□□□ -1.96
HPS1Q92902 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HPS1Q92902 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.8□□□□□ -1.96
HPS1Q92902 UBBP3-201ENST00000445497 241 ntBASIC2.8□□□□□ -1.96
HPS1Q92902 snoU13.2-201ENST00000459201 104 ntBASIC2.8□□□□□ -1.96
HPS1Q92902 RNA5SP437-201ENST00000517249 129 ntBASIC2.8□□□□□ -1.96
HPS1Q92902 AL449363.1-201ENST00000617815 186 ntBASIC2.8□□□□□ -1.96
HPS1Q92902 SCARNA4.1-201ENST00000628597 123 ntBASIC2.8□□□□□ -1.96
HPS1Q92902 AL035425.3-201ENST00000564206 4996 ntBASIC2.8□□□□□ -1.96
HPS1Q92902 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
HPS1Q92902 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HPS1Q92902 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
HPS1Q92902 RNU6-154P-201ENST00000384306 106 ntBASIC2.79□□□□□ -1.96
HPS1Q92902 SNORA48.2-201ENST00000390926 124 ntBASIC2.79□□□□□ -1.96
HPS1Q92902 RNU2-7P-201ENST00000410794 178 ntBASIC2.79□□□□□ -1.96
HPS1Q92902 AC245517.4-201ENST00000448601 281 ntBASIC2.79□□□□□ -1.96
HPS1Q92902 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HPS1Q92902 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
HPS1Q92902 Y_RNA.42-201ENST00000362660 108 ntBASIC2.78□□□□□ -1.96
HPS1Q92902 snoU13.17-201ENST00000458802 104 ntBASIC2.78□□□□□ -1.96
HPS1Q92902 snoU13.27-201ENST00000459278 104 ntBASIC2.78□□□□□ -1.96
HPS1Q92902 SNORD56.5-201ENST00000364281 72 ntBASIC2.77□□□□□ -1.97
HPS1Q92902 RNU6-291P-201ENST00000384720 107 ntBASIC2.77□□□□□ -1.97
HPS1Q92902 MIR128-1-201ENST00000384921 82 ntBASIC2.77□□□□□ -1.97
HPS1Q92902 MIR597-201ENST00000384968 97 ntBASIC2.77□□□□□ -1.97
HPS1Q92902 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.77□□□□□ -1.97
HPS1Q92902 RNA5SP481-201ENST00000516814 122 ntBASIC2.77□□□□□ -1.97
HPS1Q92902 AL096861.1-201ENST00000610899 123 ntBASIC2.77□□□□□ -1.97
HPS1Q92902 AC022202.1-201ENST00000613515 211 ntBASIC2.77□□□□□ -1.97
HPS1Q92902 AL161722.3-201ENST00000605789 2983 ntBASIC2.77□□□□□ -1.97
HPS1Q92902 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
HPS1Q92902 RNU6-340P-201ENST00000364005 107 ntBASIC2.76□□□□□ -1.97
HPS1Q92902 Y_RNA.443-201ENST00000384135 111 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 260 ms