Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 RNU5E-3P-201ENST00000515913 68 ntBASIC1.82□□□□□ -2.12
SMC1BQ8NDV3 RNA5SP236-201ENST00000516169 116 ntBASIC1.82□□□□□ -2.12
SMC1BQ8NDV3 RNU6-958P-201ENST00000516995 106 ntBASIC1.82□□□□□ -2.12
SMC1BQ8NDV3 AC091932.4-201ENST00000623386 200 ntBASIC1.82□□□□□ -2.12
SMC1BQ8NDV3 AL596211.1-201ENST00000569873 2277 ntBASIC1.82□□□□□ -2.12
SMC1BQ8NDV3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SMC1BQ8NDV3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.81□□□□□ -2.12
SMC1BQ8NDV3 SNORA24-201ENST00000384096 131 ntBASIC1.81□□□□□ -2.12
SMC1BQ8NDV3 Y_RNA.586-201ENST00000391146 98 ntBASIC1.81□□□□□ -2.12
SMC1BQ8NDV3 RNU2-11P-201ENST00000459191 187 ntBASIC1.81□□□□□ -2.12
SMC1BQ8NDV3 RNU6-947P-201ENST00000516264 106 ntBASIC1.81□□□□□ -2.12
SMC1BQ8NDV3 RNU2-60P-201ENST00000517290 128 ntBASIC1.81□□□□□ -2.12
SMC1BQ8NDV3 MIR3910-1-201ENST00000580936 111 ntBASIC1.81□□□□□ -2.12
SMC1BQ8NDV3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SMC1BQ8NDV3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.81□□□□□ -2.12
SMC1BQ8NDV3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SMC1BQ8NDV3 RNA5SP48-201ENST00000363969 126 ntBASIC1.8□□□□□ -2.12
SMC1BQ8NDV3 AL354695.1-201ENST00000427935 228 ntBASIC1.8□□□□□ -2.12
SMC1BQ8NDV3 RNU6-113P-201ENST00000516653 101 ntBASIC1.8□□□□□ -2.12
SMC1BQ8NDV3 AL022345.2-201ENST00000606307 135 ntBASIC1.8□□□□□ -2.12
SMC1BQ8NDV3 MIR4251-201ENST00000635819 61 ntBASIC1.8□□□□□ -2.12
SMC1BQ8NDV3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SMC1BQ8NDV3 HMGN1P33-201ENST00000432945 451 ntBASIC1.79□□□□□ -2.12
SMC1BQ8NDV3 snoU13.16-201ENST00000459350 104 ntBASIC1.79□□□□□ -2.12
SMC1BQ8NDV3 MIR3664-201ENST00000579074 99 ntBASIC1.79□□□□□ -2.12
SMC1BQ8NDV3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.79□□□□□ -2.12
SMC1BQ8NDV3 AL121890.5-201ENST00000620848 304 ntBASIC1.79□□□□□ -2.12
SMC1BQ8NDV3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.79□□□□□ -2.12
SMC1BQ8NDV3 AC132825.6-201ENST00000638861 357 ntBASIC1.79□□□□□ -2.12
SMC1BQ8NDV3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.79□□□□□ -2.12
SMC1BQ8NDV3 RNU6-309P-201ENST00000364573 106 ntBASIC1.78□□□□□ -2.12
SMC1BQ8NDV3 SNORD48-201ENST00000364953 64 ntBASIC1.78□□□□□ -2.12
SMC1BQ8NDV3 RNU7-73P-201ENST00000458743 63 ntBASIC1.78□□□□□ -2.12
SMC1BQ8NDV3 AL512310.8-201ENST00000550183 120 ntBASIC1.78□□□□□ -2.12
SMC1BQ8NDV3 RN7SL793P-201ENST00000583259 296 ntBASIC1.78□□□□□ -2.12
SMC1BQ8NDV3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.13
SMC1BQ8NDV3 RNY1P6-201ENST00000384193 109 ntBASIC1.77□□□□□ -2.13
SMC1BQ8NDV3 RNU6-997P-201ENST00000384725 107 ntBASIC1.77□□□□□ -2.13
SMC1BQ8NDV3 RNA5SP261-201ENST00000410536 106 ntBASIC1.77□□□□□ -2.13
SMC1BQ8NDV3 RNU7-41P-201ENST00000515917 61 ntBASIC1.77□□□□□ -2.13
SMC1BQ8NDV3 RNU6-902P-201ENST00000517212 91 ntBASIC1.77□□□□□ -2.13
SMC1BQ8NDV3 SNORD114-27-201ENST00000363766 70 ntBASIC1.76□□□□□ -2.13
SMC1BQ8NDV3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
SMC1BQ8NDV3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.76□□□□□ -2.13
SMC1BQ8NDV3 RNU6-1211P-201ENST00000459179 105 ntBASIC1.76□□□□□ -2.13
SMC1BQ8NDV3 MIR3121-201ENST00000579680 77 ntBASIC1.76□□□□□ -2.13
SMC1BQ8NDV3 AL096861.1-201ENST00000610899 123 ntBASIC1.76□□□□□ -2.13
SMC1BQ8NDV3 RNU6-690P-201ENST00000365242 106 ntBASIC1.75□□□□□ -2.13
SMC1BQ8NDV3 RPS27P16-201ENST00000425758 201 ntBASIC1.75□□□□□ -2.13
SMC1BQ8NDV3 MIR3152-201ENST00000579801 74 ntBASIC1.75□□□□□ -2.13
SMC1BQ8NDV3 Y_RNA.114-201ENST00000363265 113 ntBASIC1.74□□□□□ -2.13
SMC1BQ8NDV3 RNU6-647P-201ENST00000364243 107 ntBASIC1.74□□□□□ -2.13
SMC1BQ8NDV3 RNA5SP363-201ENST00000365072 115 ntBASIC1.74□□□□□ -2.13
SMC1BQ8NDV3 RNU6-81P-201ENST00000365608 104 ntBASIC1.74□□□□□ -2.13
SMC1BQ8NDV3 RNY1P4-201ENST00000384595 115 ntBASIC1.74□□□□□ -2.13
SMC1BQ8NDV3 Y_RNA.651-201ENST00000459380 103 ntBASIC1.74□□□□□ -2.13
SMC1BQ8NDV3 RN7SKP88-201ENST00000516847 250 ntBASIC1.74□□□□□ -2.13
SMC1BQ8NDV3 RNU6-971P-201ENST00000516920 106 ntBASIC1.74□□□□□ -2.13
SMC1BQ8NDV3 MIR3192-201ENST00000584920 77 ntBASIC1.74□□□□□ -2.13
SMC1BQ8NDV3 7SK.8-201ENST00000612110 250 ntBASIC1.74□□□□□ -2.13
SMC1BQ8NDV3 7SK.11-201ENST00000615477 250 ntBASIC1.74□□□□□ -2.13
SMC1BQ8NDV3 7SK.13-201ENST00000622040 250 ntBASIC1.74□□□□□ -2.13
SMC1BQ8NDV3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.73□□□□□ -2.13
SMC1BQ8NDV3 RNU6-406P-201ENST00000516470 107 ntBASIC1.73□□□□□ -2.13
SMC1BQ8NDV3 RNU6-508P-201ENST00000363231 103 ntBASIC1.72□□□□□ -2.13
SMC1BQ8NDV3 RNU6-893P-201ENST00000458841 100 ntBASIC1.72□□□□□ -2.13
SMC1BQ8NDV3 AL133373.1-201ENST00000497098 94 ntBASIC1.72□□□□□ -2.13
SMC1BQ8NDV3 RNA5SP436-201ENST00000516020 115 ntBASIC1.72□□□□□ -2.13
SMC1BQ8NDV3 AC133485.4-201ENST00000561835 220 ntBASIC1.72□□□□□ -2.13
SMC1BQ8NDV3 AC138907.4-201ENST00000570107 226 ntBASIC1.72□□□□□ -2.13
SMC1BQ8NDV3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SMC1BQ8NDV3 RNU6-349P-201ENST00000362402 107 ntBASIC1.71□□□□□ -2.14
SMC1BQ8NDV3 Y_RNA.294-201ENST00000364916 102 ntBASIC1.71□□□□□ -2.14
SMC1BQ8NDV3 RNU6-913P-201ENST00000390913 95 ntBASIC1.71□□□□□ -2.14
SMC1BQ8NDV3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.71□□□□□ -2.14
SMC1BQ8NDV3 AL158147.1-201ENST00000443970 75 ntBASIC1.71□□□□□ -2.14
SMC1BQ8NDV3 AL020996.3-201ENST00000606617 222 ntBASIC1.71□□□□□ -2.14
SMC1BQ8NDV3 AC021613.1-201ENST00000623880 111 ntBASIC1.71□□□□□ -2.14
SMC1BQ8NDV3 SNORA1.1-201ENST00000364671 133 ntBASIC1.7□□□□□ -2.14
SMC1BQ8NDV3 RNU6-959P-201ENST00000384671 107 ntBASIC1.7□□□□□ -2.14
SMC1BQ8NDV3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.7□□□□□ -2.14
SMC1BQ8NDV3 RNU6-1319P-201ENST00000390855 104 ntBASIC1.7□□□□□ -2.14
SMC1BQ8NDV3 RNU6-747P-201ENST00000390928 104 ntBASIC1.7□□□□□ -2.14
SMC1BQ8NDV3 RNU6-241P-201ENST00000391148 104 ntBASIC1.7□□□□□ -2.14
SMC1BQ8NDV3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.7□□□□□ -2.14
SMC1BQ8NDV3 RNU6-177P-201ENST00000411257 104 ntBASIC1.7□□□□□ -2.14
SMC1BQ8NDV3 RNU6-240P-201ENST00000516098 97 ntBASIC1.7□□□□□ -2.14
SMC1BQ8NDV3 RNU6-970P-201ENST00000516312 107 ntBASIC1.7□□□□□ -2.14
SMC1BQ8NDV3 RNU6-165P-201ENST00000517170 99 ntBASIC1.7□□□□□ -2.14
SMC1BQ8NDV3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.7□□□□□ -2.14
SMC1BQ8NDV3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SMC1BQ8NDV3 Y_RNA.68-201ENST00000362881 102 ntBASIC1.69□□□□□ -2.14
SMC1BQ8NDV3 RNU4-16P-201ENST00000364737 141 ntBASIC1.69□□□□□ -2.14
SMC1BQ8NDV3 CYP3A52P-201ENST00000563326 91 ntBASIC1.69□□□□□ -2.14
SMC1BQ8NDV3 MIR548AO-201ENST00000579992 96 ntBASIC1.69□□□□□ -2.14
SMC1BQ8NDV3 AC021443.1-201ENST00000604478 211 ntBASIC1.69□□□□□ -2.14
SMC1BQ8NDV3 AL137067.1-201ENST00000615933 120 ntBASIC1.69□□□□□ -2.14
SMC1BQ8NDV3 RNU6-80P-201ENST00000384195 107 ntBASIC1.68□□□□□ -2.14
SMC1BQ8NDV3 MIR216A-201ENST00000385063 110 ntBASIC1.68□□□□□ -2.14
SMC1BQ8NDV3 RPS3AP1-201ENST00000413190 320 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 294.1 ms