Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC012676.2-201ENST00000619258 186 ntBASIC0.96□□□□□ -2.26
LYSMD4Q5XG99 MIR3658-201ENST00000636291 56 ntBASIC0.96□□□□□ -2.26
LYSMD4Q5XG99 Y_RNA.205-201ENST00000364128 113 ntBASIC0.95□□□□□ -2.26
LYSMD4Q5XG99 Y_RNA.410-201ENST00000383992 113 ntBASIC0.95□□□□□ -2.26
LYSMD4Q5XG99 RNU6-125P-201ENST00000384505 107 ntBASIC0.95□□□□□ -2.26
LYSMD4Q5XG99 Y_RNA.521-201ENST00000384560 114 ntBASIC0.95□□□□□ -2.26
LYSMD4Q5XG99 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.95□□□□□ -2.26
LYSMD4Q5XG99 RNU2-11P-201ENST00000459191 187 ntBASIC0.95□□□□□ -2.26
LYSMD4Q5XG99 RNU7-120P-201ENST00000459334 63 ntBASIC0.95□□□□□ -2.26
LYSMD4Q5XG99 SNORD124-201ENST00000459577 104 ntBASIC0.95□□□□□ -2.26
LYSMD4Q5XG99 AC107297.1-201ENST00000459991 176 ntBASIC0.95□□□□□ -2.26
LYSMD4Q5XG99 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.95□□□□□ -2.26
LYSMD4Q5XG99 UBL5P1-201ENST00000507979 193 ntBASIC0.95□□□□□ -2.26
LYSMD4Q5XG99 MIR3671-201ENST00000580455 88 ntBASIC0.95□□□□□ -2.26
LYSMD4Q5XG99 AL020996.3-201ENST00000606617 222 ntBASIC0.95□□□□□ -2.26
LYSMD4Q5XG99 RNU6-312P-201ENST00000364629 107 ntBASIC0.94□□□□□ -2.26
LYSMD4Q5XG99 RNU1-133P-201ENST00000364867 167 ntBASIC0.94□□□□□ -2.26
LYSMD4Q5XG99 Y_RNA.351-201ENST00000365436 96 ntBASIC0.94□□□□□ -2.26
LYSMD4Q5XG99 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
LYSMD4Q5XG99 RNU6-998P-201ENST00000515894 101 ntBASIC0.94□□□□□ -2.26
LYSMD4Q5XG99 MIR5197-201ENST00000583721 112 ntBASIC0.94□□□□□ -2.26
LYSMD4Q5XG99 SEPT14P17-201ENST00000617978 177 ntBASIC0.94□□□□□ -2.26
LYSMD4Q5XG99 Y_RNA.150-201ENST00000363562 102 ntBASIC0.93□□□□□ -2.26
LYSMD4Q5XG99 Y_RNA.240-201ENST00000364469 95 ntBASIC0.93□□□□□ -2.26
LYSMD4Q5XG99 Y_RNA.542-201ENST00000384641 111 ntBASIC0.93□□□□□ -2.26
LYSMD4Q5XG99 MIR200A-201ENST00000384875 90 ntBASIC0.93□□□□□ -2.26
LYSMD4Q5XG99 RNU6-205P-201ENST00000390858 107 ntBASIC0.93□□□□□ -2.26
LYSMD4Q5XG99 MRPL35P3-201ENST00000421557 364 ntBASIC0.93□□□□□ -2.26
LYSMD4Q5XG99 AL035398.1-201ENST00000430869 322 ntBASIC0.93□□□□□ -2.26
LYSMD4Q5XG99 RN7SL793P-201ENST00000583259 296 ntBASIC0.93□□□□□ -2.26
LYSMD4Q5XG99 AC104465.1-201ENST00000611365 139 ntBASIC0.93□□□□□ -2.26
LYSMD4Q5XG99 AL596211.1-201ENST00000569873 2277 ntBASIC0.92□□□□□ -2.26
LYSMD4Q5XG99 SNORD114-24-201ENST00000365029 72 ntBASIC0.92□□□□□ -2.26
LYSMD4Q5XG99 RNU6-1292P-201ENST00000383856 107 ntBASIC0.92□□□□□ -2.26
LYSMD4Q5XG99 Y_RNA.785-201ENST00000384290 109 ntBASIC0.92□□□□□ -2.26
LYSMD4Q5XG99 MIR216A-201ENST00000385063 110 ntBASIC0.92□□□□□ -2.26
LYSMD4Q5XG99 RNU6-588P-201ENST00000410281 105 ntBASIC0.92□□□□□ -2.26
LYSMD4Q5XG99 AC244023.1-201ENST00000426884 112 ntBASIC0.92□□□□□ -2.26
LYSMD4Q5XG99 snoU13.16-201ENST00000459350 104 ntBASIC0.92□□□□□ -2.26
LYSMD4Q5XG99 snoU13.21-201ENST00000459368 105 ntBASIC0.92□□□□□ -2.26
LYSMD4Q5XG99 Y_RNA.662-201ENST00000516028 97 ntBASIC0.92□□□□□ -2.26
LYSMD4Q5XG99 RNU6-1149P-201ENST00000516810 97 ntBASIC0.92□□□□□ -2.26
LYSMD4Q5XG99 SCARNA15-202ENST00000516881 127 ntBASIC0.92□□□□□ -2.26
LYSMD4Q5XG99 RNU11-2P-201ENST00000516898 142 ntBASIC0.92□□□□□ -2.26
LYSMD4Q5XG99 MIR4661-201ENST00000582720 75 ntBASIC0.92□□□□□ -2.26
LYSMD4Q5XG99 AC242498.1-201ENST00000604134 111 ntBASIC0.92□□□□□ -2.26
LYSMD4Q5XG99 RNU6-94P-201ENST00000607728 107 ntBASIC0.92□□□□□ -2.26
LYSMD4Q5XG99 MIR8055-201ENST00000610739 97 ntBASIC0.92□□□□□ -2.26
LYSMD4Q5XG99 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
LYSMD4Q5XG99 AL391516.1-201ENST00000554380 2449 ntBASIC0.91□□□□□ -2.26
LYSMD4Q5XG99 RNU6-508P-201ENST00000363231 103 ntBASIC0.91□□□□□ -2.26
LYSMD4Q5XG99 RNU4-84P-201ENST00000364200 139 ntBASIC0.91□□□□□ -2.26
LYSMD4Q5XG99 RNY1P4-201ENST00000384595 115 ntBASIC0.91□□□□□ -2.26
LYSMD4Q5XG99 RNA5SP127-201ENST00000411051 133 ntBASIC0.91□□□□□ -2.26
LYSMD4Q5XG99 RNU6-1135P-201ENST00000411083 103 ntBASIC0.91□□□□□ -2.26
LYSMD4Q5XG99 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.91□□□□□ -2.26
LYSMD4Q5XG99 RNU7-73P-201ENST00000458743 63 ntBASIC0.91□□□□□ -2.26
LYSMD4Q5XG99 AC107027.2-201ENST00000512197 115 ntBASIC0.91□□□□□ -2.26
LYSMD4Q5XG99 AC036111.3-201ENST00000526389 112 ntBASIC0.91□□□□□ -2.26
LYSMD4Q5XG99 MIR4698-201ENST00000577795 80 ntBASIC0.91□□□□□ -2.26
LYSMD4Q5XG99 AC131055.1-201ENST00000584626 316 ntBASIC0.91□□□□□ -2.26
LYSMD4Q5XG99 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.91□□□□□ -2.26
LYSMD4Q5XG99 uc_338.6-201ENST00000613544 171 ntBASIC0.91□□□□□ -2.26
LYSMD4Q5XG99 AC091932.4-201ENST00000623386 200 ntBASIC0.91□□□□□ -2.26
LYSMD4Q5XG99 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.9□□□□□ -2.27
LYSMD4Q5XG99 SNORA25.7-201ENST00000364375 127 ntBASIC0.9□□□□□ -2.27
LYSMD4Q5XG99 Y_RNA.357-201ENST00000365487 109 ntBASIC0.9□□□□□ -2.27
LYSMD4Q5XG99 RNU6-597P-201ENST00000365620 102 ntBASIC0.9□□□□□ -2.27
LYSMD4Q5XG99 MIR624-201ENST00000385217 97 ntBASIC0.9□□□□□ -2.27
LYSMD4Q5XG99 RNU6-239P-201ENST00000390990 99 ntBASIC0.9□□□□□ -2.27
LYSMD4Q5XG99 PCNPP3-201ENST00000393579 471 ntBASIC0.9□□□□□ -2.27
LYSMD4Q5XG99 MIR548I3-201ENST00000408378 149 ntBASIC0.9□□□□□ -2.27
LYSMD4Q5XG99 AC015818.7-201ENST00000428754 109 ntBASIC0.9□□□□□ -2.27
LYSMD4Q5XG99 AC108059.2-201ENST00000434626 151 ntBASIC0.9□□□□□ -2.27
LYSMD4Q5XG99 AC087499.7-201ENST00000441958 109 ntBASIC0.9□□□□□ -2.27
LYSMD4Q5XG99 RPS29P28-201ENST00000446439 141 ntBASIC0.9□□□□□ -2.27
LYSMD4Q5XG99 RNU7-96P-201ENST00000459535 64 ntBASIC0.9□□□□□ -2.27
LYSMD4Q5XG99 RNU6-794P-201ENST00000517261 64 ntBASIC0.9□□□□□ -2.27
LYSMD4Q5XG99 Y_RNA.52-201ENST00000362760 96 ntBASIC0.89□□□□□ -2.27
LYSMD4Q5XG99 RNU6-396P-201ENST00000365369 105 ntBASIC0.89□□□□□ -2.27
LYSMD4Q5XG99 RNU6-1130P-201ENST00000365434 107 ntBASIC0.89□□□□□ -2.27
LYSMD4Q5XG99 SNORA2B-201ENST00000384583 137 ntBASIC0.89□□□□□ -2.27
LYSMD4Q5XG99 SNORA26.6-201ENST00000391256 115 ntBASIC0.89□□□□□ -2.27
LYSMD4Q5XG99 MIR942-201ENST00000401111 86 ntBASIC0.89□□□□□ -2.27
LYSMD4Q5XG99 PDCD5P2-201ENST00000507570 312 ntBASIC0.89□□□□□ -2.27
LYSMD4Q5XG99 RNU7-53P-201ENST00000516705 60 ntBASIC0.89□□□□□ -2.27
LYSMD4Q5XG99 Y_RNA.700-201ENST00000516806 100 ntBASIC0.89□□□□□ -2.27
LYSMD4Q5XG99 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
LYSMD4Q5XG99 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
LYSMD4Q5XG99 Y_RNA.8-201ENST00000362353 102 ntBASIC0.88□□□□□ -2.27
LYSMD4Q5XG99 Y_RNA.272-201ENST00000364696 102 ntBASIC0.88□□□□□ -2.27
LYSMD4Q5XG99 RNU4-16P-201ENST00000364737 141 ntBASIC0.88□□□□□ -2.27
LYSMD4Q5XG99 Y_RNA.337-201ENST00000365312 102 ntBASIC0.88□□□□□ -2.27
LYSMD4Q5XG99 RNU6-804P-201ENST00000384286 107 ntBASIC0.88□□□□□ -2.27
LYSMD4Q5XG99 SNORD12C-201ENST00000386307 89 ntBASIC0.88□□□□□ -2.27
LYSMD4Q5XG99 RNU6-613P-201ENST00000410412 108 ntBASIC0.88□□□□□ -2.27
LYSMD4Q5XG99 RNU6-602P-201ENST00000411155 105 ntBASIC0.88□□□□□ -2.27
LYSMD4Q5XG99 RNU7-121P-201ENST00000516604 62 ntBASIC0.88□□□□□ -2.27
LYSMD4Q5XG99 RNU6-182P-201ENST00000516970 105 ntBASIC0.88□□□□□ -2.27
LYSMD4Q5XG99 MIR6844-201ENST00000637122 62 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 426.3 ms