Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 AL365205.2-201ENST00000594586 68 ntBASIC0.67□□□□□ -2.3
CCDC30Q5VVM6 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.67□□□□□ -2.3
CCDC30Q5VVM6 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CCDC30Q5VVM6 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
CCDC30Q5VVM6 Y_RNA.288-201ENST00000364854 92 ntBASIC0.66□□□□□ -2.3
CCDC30Q5VVM6 Y_RNA.292-201ENST00000364904 97 ntBASIC0.66□□□□□ -2.3
CCDC30Q5VVM6 Y_RNA.351-201ENST00000365436 96 ntBASIC0.66□□□□□ -2.3
CCDC30Q5VVM6 MIR936-201ENST00000401264 98 ntBASIC0.66□□□□□ -2.3
CCDC30Q5VVM6 Y_RNA.618-201ENST00000410949 107 ntBASIC0.66□□□□□ -2.3
CCDC30Q5VVM6 RNA5SP222-201ENST00000411039 105 ntBASIC0.66□□□□□ -2.3
CCDC30Q5VVM6 AL358176.2-201ENST00000425769 204 ntBASIC0.66□□□□□ -2.3
CCDC30Q5VVM6 AL138752.1-201ENST00000452964 351 ntBASIC0.66□□□□□ -2.3
CCDC30Q5VVM6 SNORD127-201ENST00000458892 86 ntBASIC0.66□□□□□ -2.3
CCDC30Q5VVM6 MIR4643-201ENST00000577473 78 ntBASIC0.66□□□□□ -2.3
CCDC30Q5VVM6 AC020891.4-201ENST00000605745 93 ntBASIC0.66□□□□□ -2.3
CCDC30Q5VVM6 Y_RNA.277-201ENST00000364754 102 ntBASIC0.65□□□□□ -2.31
CCDC30Q5VVM6 Y_RNA.459-201ENST00000384251 102 ntBASIC0.65□□□□□ -2.31
CCDC30Q5VVM6 Y_RNA.562-201ENST00000384695 113 ntBASIC0.65□□□□□ -2.31
CCDC30Q5VVM6 MT-TF-201ENST00000387314 71 ntBASIC0.65□□□□□ -2.31
CCDC30Q5VVM6 MIR938-201ENST00000401216 83 ntBASIC0.65□□□□□ -2.31
CCDC30Q5VVM6 AC098934.3-201ENST00000430450 190 ntBASIC0.65□□□□□ -2.31
CCDC30Q5VVM6 RNU7-56P-201ENST00000458744 62 ntBASIC0.65□□□□□ -2.31
CCDC30Q5VVM6 RNU4-54P-201ENST00000516428 129 ntBASIC0.65□□□□□ -2.31
CCDC30Q5VVM6 MIR4744-201ENST00000581563 82 ntBASIC0.65□□□□□ -2.31
CCDC30Q5VVM6 MIR6717-201ENST00000622747 73 ntBASIC0.65□□□□□ -2.31
CCDC30Q5VVM6 AC010332.2-201ENST00000613083 1904 ntBASIC0.65□□□□□ -2.31
CCDC30Q5VVM6 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
CCDC30Q5VVM6 Y_RNA.76-201ENST00000362931 109 ntBASIC0.64□□□□□ -2.31
CCDC30Q5VVM6 RNU6-1309P-201ENST00000363305 108 ntBASIC0.64□□□□□ -2.31
CCDC30Q5VVM6 Y_RNA.466-201ENST00000384294 113 ntBASIC0.64□□□□□ -2.31
CCDC30Q5VVM6 Y_RNA.540-201ENST00000384638 111 ntBASIC0.64□□□□□ -2.31
CCDC30Q5VVM6 SNORA26.6-201ENST00000391256 115 ntBASIC0.64□□□□□ -2.31
CCDC30Q5VVM6 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.64□□□□□ -2.31
CCDC30Q5VVM6 MIR3129-201ENST00000581095 76 ntBASIC0.64□□□□□ -2.31
CCDC30Q5VVM6 Y_RNA.54-201ENST00000362766 105 ntBASIC0.63□□□□□ -2.31
CCDC30Q5VVM6 Y_RNA.430-201ENST00000384081 110 ntBASIC0.63□□□□□ -2.31
CCDC30Q5VVM6 RNU6-1190P-201ENST00000410811 104 ntBASIC0.63□□□□□ -2.31
CCDC30Q5VVM6 RNU6-561P-201ENST00000516222 102 ntBASIC0.63□□□□□ -2.31
CCDC30Q5VVM6 RNU6-229P-201ENST00000516614 102 ntBASIC0.63□□□□□ -2.31
CCDC30Q5VVM6 uc_338.6-201ENST00000613544 171 ntBASIC0.63□□□□□ -2.31
CCDC30Q5VVM6 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
CCDC30Q5VVM6 RNU6-945P-201ENST00000383947 107 ntBASIC0.62□□□□□ -2.31
CCDC30Q5VVM6 SNORA36.2-201ENST00000384004 127 ntBASIC0.62□□□□□ -2.31
CCDC30Q5VVM6 MIR216A-201ENST00000385063 110 ntBASIC0.62□□□□□ -2.31
CCDC30Q5VVM6 MIR125B2-201ENST00000385128 89 ntBASIC0.62□□□□□ -2.31
CCDC30Q5VVM6 MIR140-201ENST00000385282 100 ntBASIC0.62□□□□□ -2.31
CCDC30Q5VVM6 RNA5SP193-201ENST00000410353 107 ntBASIC0.62□□□□□ -2.31
CCDC30Q5VVM6 RNU2-38P-201ENST00000410856 79 ntBASIC0.62□□□□□ -2.31
CCDC30Q5VVM6 RN7SKP12-201ENST00000516275 143 ntBASIC0.62□□□□□ -2.31
CCDC30Q5VVM6 RNA5SP480-201ENST00000516840 109 ntBASIC0.62□□□□□ -2.31
CCDC30Q5VVM6 MIR4711-201ENST00000578274 70 ntBASIC0.62□□□□□ -2.31
CCDC30Q5VVM6 MIR3152-201ENST00000579801 74 ntBASIC0.62□□□□□ -2.31
CCDC30Q5VVM6 MIR342-201ENST00000362212 99 ntBASIC0.61□□□□□ -2.31
CCDC30Q5VVM6 Y_RNA.121-201ENST00000363309 113 ntBASIC0.61□□□□□ -2.31
CCDC30Q5VVM6 RNU6-694P-201ENST00000364071 147 ntBASIC0.61□□□□□ -2.31
CCDC30Q5VVM6 RNY4P28-201ENST00000365281 93 ntBASIC0.61□□□□□ -2.31
CCDC30Q5VVM6 RNU6-1237P-201ENST00000384777 107 ntBASIC0.61□□□□□ -2.31
CCDC30Q5VVM6 RNU6-1319P-201ENST00000390855 104 ntBASIC0.61□□□□□ -2.31
CCDC30Q5VVM6 RNU6-747P-201ENST00000390928 104 ntBASIC0.61□□□□□ -2.31
CCDC30Q5VVM6 RNU6-241P-201ENST00000391148 104 ntBASIC0.61□□□□□ -2.31
CCDC30Q5VVM6 SNORD58.1-201ENST00000391313 66 ntBASIC0.61□□□□□ -2.31
CCDC30Q5VVM6 MIR1257-201ENST00000408490 117 ntBASIC0.61□□□□□ -2.31
CCDC30Q5VVM6 AC015818.7-201ENST00000428754 109 ntBASIC0.61□□□□□ -2.31
CCDC30Q5VVM6 AC087499.7-201ENST00000441958 109 ntBASIC0.61□□□□□ -2.31
CCDC30Q5VVM6 RNU7-185P-201ENST00000459215 60 ntBASIC0.61□□□□□ -2.31
CCDC30Q5VVM6 SNORD116-25-201ENST00000516517 92 ntBASIC0.61□□□□□ -2.31
CCDC30Q5VVM6 MIR3612-201ENST00000579753 87 ntBASIC0.61□□□□□ -2.31
CCDC30Q5VVM6 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.61□□□□□ -2.31
CCDC30Q5VVM6 uc_338.17-201ENST00000619633 179 ntBASIC0.61□□□□□ -2.31
CCDC30Q5VVM6 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.61□□□□□ -2.31
CCDC30Q5VVM6 MIR376A2-201ENST00000636782 80 ntBASIC0.61□□□□□ -2.31
CCDC30Q5VVM6 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
CCDC30Q5VVM6 MIR30D-201ENST00000362283 70 ntBASIC0.6□□□□□ -2.31
CCDC30Q5VVM6 MIR18A-201ENST00000362310 71 ntBASIC0.6□□□□□ -2.31
CCDC30Q5VVM6 Y_RNA.36-201ENST00000362602 112 ntBASIC0.6□□□□□ -2.31
CCDC30Q5VVM6 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
CCDC30Q5VVM6 Y_RNA.393-201ENST00000383936 102 ntBASIC0.6□□□□□ -2.31
CCDC30Q5VVM6 SNORD12C-201ENST00000386307 89 ntBASIC0.6□□□□□ -2.31
CCDC30Q5VVM6 RNU6-578P-201ENST00000390980 103 ntBASIC0.6□□□□□ -2.31
CCDC30Q5VVM6 MIR1302-3-201ENST00000408128 138 ntBASIC0.6□□□□□ -2.31
CCDC30Q5VVM6 RNU6-447P-201ENST00000410293 104 ntBASIC0.6□□□□□ -2.31
CCDC30Q5VVM6 RNU6-1118P-201ENST00000410382 104 ntBASIC0.6□□□□□ -2.31
CCDC30Q5VVM6 RNU6-1076P-201ENST00000410397 104 ntBASIC0.6□□□□□ -2.31
CCDC30Q5VVM6 RNU6-355P-201ENST00000410427 104 ntBASIC0.6□□□□□ -2.31
CCDC30Q5VVM6 RNU6-791P-201ENST00000410467 104 ntBASIC0.6□□□□□ -2.31
CCDC30Q5VVM6 RNU6-705P-201ENST00000410601 104 ntBASIC0.6□□□□□ -2.31
CCDC30Q5VVM6 RNU6-1100P-201ENST00000410691 104 ntBASIC0.6□□□□□ -2.31
CCDC30Q5VVM6 RNU6-860P-201ENST00000410860 104 ntBASIC0.6□□□□□ -2.31
CCDC30Q5VVM6 RNU6-1217P-201ENST00000411276 104 ntBASIC0.6□□□□□ -2.31
CCDC30Q5VVM6 RNU6-785P-201ENST00000411324 104 ntBASIC0.6□□□□□ -2.31
CCDC30Q5VVM6 AC114737.2-201ENST00000421583 173 ntBASIC0.6□□□□□ -2.31
CCDC30Q5VVM6 AL121914.1-201ENST00000450188 156 ntBASIC0.6□□□□□ -2.31
CCDC30Q5VVM6 AL157398.1-201ENST00000452981 186 ntBASIC0.6□□□□□ -2.31
CCDC30Q5VVM6 SNORD92-201ENST00000585078 85 ntBASIC0.6□□□□□ -2.31
CCDC30Q5VVM6 U6.90-201ENST00000614007 104 ntBASIC0.6□□□□□ -2.31
CCDC30Q5VVM6 U6.70-201ENST00000620287 104 ntBASIC0.6□□□□□ -2.31
CCDC30Q5VVM6 AC243829.3-201ENST00000622177 108 ntBASIC0.6□□□□□ -2.31
CCDC30Q5VVM6 AC091932.4-201ENST00000623386 200 ntBASIC0.6□□□□□ -2.31
CCDC30Q5VVM6 RNU6-364P-201ENST00000384387 107 ntBASIC0.59□□□□□ -2.31
CCDC30Q5VVM6 MTCYBP9-201ENST00000431021 303 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms