Protein–RNA interactions for Protein: Q53GI3

ZNF394, Zinc finger protein 394, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF394Q53GI3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
ZNF394Q53GI3 SNORD115-2-201ENST00000362842 82 ntBASIC1.98□□□□□ -2.09
ZNF394Q53GI3 SNORD115-20-201ENST00000365099 82 ntBASIC1.98□□□□□ -2.09
ZNF394Q53GI3 SNORD38B-201ENST00000384690 67 ntBASIC1.98□□□□□ -2.09
ZNF394Q53GI3 RNU6-1190P-201ENST00000410811 104 ntBASIC1.98□□□□□ -2.09
ZNF394Q53GI3 Y_RNA.630-201ENST00000411370 108 ntBASIC1.98□□□□□ -2.09
ZNF394Q53GI3 RNU7-113P-201ENST00000459273 62 ntBASIC1.98□□□□□ -2.09
ZNF394Q53GI3 SNORD38B-202ENST00000625943 69 ntBASIC1.98□□□□□ -2.09
ZNF394Q53GI3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ZNF394Q53GI3 RNU6-396P-201ENST00000365369 105 ntBASIC1.97□□□□□ -2.09
ZNF394Q53GI3 Y_RNA.531-201ENST00000384589 121 ntBASIC1.97□□□□□ -2.09
ZNF394Q53GI3 MIR548A3-201ENST00000385297 97 ntBASIC1.97□□□□□ -2.09
ZNF394Q53GI3 RNU6-1064P-201ENST00000410626 104 ntBASIC1.97□□□□□ -2.09
ZNF394Q53GI3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.97□□□□□ -2.09
ZNF394Q53GI3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.97□□□□□ -2.09
ZNF394Q53GI3 HMGN1P33-201ENST00000432945 451 ntBASIC1.97□□□□□ -2.09
ZNF394Q53GI3 RPS29P11-201ENST00000496507 171 ntBASIC1.97□□□□□ -2.09
ZNF394Q53GI3 AC113410.1-201ENST00000505029 247 ntBASIC1.97□□□□□ -2.09
ZNF394Q53GI3 RN7SKP88-201ENST00000516847 250 ntBASIC1.97□□□□□ -2.09
ZNF394Q53GI3 RNU6-165P-201ENST00000517170 99 ntBASIC1.97□□□□□ -2.09
ZNF394Q53GI3 AC004812.1-201ENST00000540773 146 ntBASIC1.97□□□□□ -2.09
ZNF394Q53GI3 MIR3122-201ENST00000577243 73 ntBASIC1.97□□□□□ -2.09
ZNF394Q53GI3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.97□□□□□ -2.09
ZNF394Q53GI3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.97□□□□□ -2.09
ZNF394Q53GI3 7SK.8-201ENST00000612110 250 ntBASIC1.97□□□□□ -2.09
ZNF394Q53GI3 7SK.11-201ENST00000615477 250 ntBASIC1.97□□□□□ -2.09
ZNF394Q53GI3 7SK.13-201ENST00000622040 250 ntBASIC1.97□□□□□ -2.09
ZNF394Q53GI3 RNU6-1290P-201ENST00000362957 109 ntBASIC1.96□□□□□ -2.1
ZNF394Q53GI3 SNORA16.1-201ENST00000364597 132 ntBASIC1.96□□□□□ -2.1
ZNF394Q53GI3 RNU6-476P-201ENST00000384726 107 ntBASIC1.96□□□□□ -2.1
ZNF394Q53GI3 MIR583-201ENST00000384846 75 ntBASIC1.96□□□□□ -2.1
ZNF394Q53GI3 RNU6-735P-201ENST00000410612 107 ntBASIC1.96□□□□□ -2.1
ZNF394Q53GI3 RNU6-1054P-201ENST00000411293 104 ntBASIC1.96□□□□□ -2.1
ZNF394Q53GI3 RN7SL274P-201ENST00000492268 272 ntBASIC1.96□□□□□ -2.1
ZNF394Q53GI3 RNU6-237P-201ENST00000515985 71 ntBASIC1.96□□□□□ -2.1
ZNF394Q53GI3 MIR2115-201ENST00000516657 100 ntBASIC1.96□□□□□ -2.1
ZNF394Q53GI3 AP003716.2-201ENST00000528260 108 ntBASIC1.96□□□□□ -2.1
ZNF394Q53GI3 RNU6-1144P-201ENST00000384247 104 ntBASIC1.95□□□□□ -2.1
ZNF394Q53GI3 RNU6-602P-201ENST00000411155 105 ntBASIC1.95□□□□□ -2.1
ZNF394Q53GI3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.95□□□□□ -2.1
ZNF394Q53GI3 SNORD33.1-201ENST00000516213 88 ntBASIC1.95□□□□□ -2.1
ZNF394Q53GI3 MIR3163-201ENST00000581592 73 ntBASIC1.95□□□□□ -2.1
ZNF394Q53GI3 RNA5SP432-201ENST00000362480 116 ntBASIC1.94□□□□□ -2.1
ZNF394Q53GI3 RNA5SP264-201ENST00000363115 107 ntBASIC1.94□□□□□ -2.1
ZNF394Q53GI3 RNY4P6-201ENST00000363667 96 ntBASIC1.94□□□□□ -2.1
ZNF394Q53GI3 MIR9-3-201ENST00000385084 90 ntBASIC1.94□□□□□ -2.1
ZNF394Q53GI3 MT-TN-201ENST00000387400 73 ntBASIC1.94□□□□□ -2.1
ZNF394Q53GI3 U8.13-201ENST00000390842 128 ntBASIC1.94□□□□□ -2.1
ZNF394Q53GI3 Y_RNA.649-201ENST00000459077 103 ntBASIC1.94□□□□□ -2.1
ZNF394Q53GI3 RPS23P4-201ENST00000487908 423 ntBASIC1.94□□□□□ -2.1
ZNF394Q53GI3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.94□□□□□ -2.1
ZNF394Q53GI3 MIR8065-201ENST00000620577 100 ntBASIC1.94□□□□□ -2.1
ZNF394Q53GI3 ZNF355P-201ENST00000427301 3216 ntBASIC1.93□□□□□ -2.1
ZNF394Q53GI3 MIR103A2-201ENST00000362154 78 ntBASIC1.93□□□□□ -2.1
ZNF394Q53GI3 snoU13.23-201ENST00000458863 104 ntBASIC1.93□□□□□ -2.1
ZNF394Q53GI3 AC108210.2-201ENST00000503681 201 ntBASIC1.93□□□□□ -2.1
ZNF394Q53GI3 RNA5SP182-201ENST00000516064 82 ntBASIC1.93□□□□□ -2.1
ZNF394Q53GI3 MIR4285-201ENST00000581001 85 ntBASIC1.93□□□□□ -2.1
ZNF394Q53GI3 MIR6845-201ENST00000613182 61 ntBASIC1.93□□□□□ -2.1
ZNF394Q53GI3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
ZNF394Q53GI3 MIR1302-7-201ENST00000408841 72 ntBASIC1.92□□□□□ -2.1
ZNF394Q53GI3 AL512326.2-201ENST00000426359 151 ntBASIC1.92□□□□□ -2.1
ZNF394Q53GI3 RNU6-295P-201ENST00000516901 104 ntBASIC1.92□□□□□ -2.1
ZNF394Q53GI3 MIR4419B-201ENST00000577260 68 ntBASIC1.92□□□□□ -2.1
ZNF394Q53GI3 MIR4264-201ENST00000583520 66 ntBASIC1.92□□□□□ -2.1
ZNF394Q53GI3 AP000942.3-201ENST00000603702 160 ntBASIC1.92□□□□□ -2.1
ZNF394Q53GI3 AP000753.3-201ENST00000604083 169 ntBASIC1.92□□□□□ -2.1
ZNF394Q53GI3 SNORA25.3-201ENST00000363205 127 ntBASIC1.91□□□□□ -2.1
ZNF394Q53GI3 Y_RNA.171-201ENST00000363760 102 ntBASIC1.91□□□□□ -2.1
ZNF394Q53GI3 snoU13.25-201ENST00000458945 104 ntBASIC1.91□□□□□ -2.1
ZNF394Q53GI3 MTND5P34-201ENST00000568888 325 ntBASIC1.91□□□□□ -2.1
ZNF394Q53GI3 PRELID3BP2-201ENST00000605362 201 ntBASIC1.91□□□□□ -2.1
ZNF394Q53GI3 MIR8081-201ENST00000611533 95 ntBASIC1.91□□□□□ -2.1
ZNF394Q53GI3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.91□□□□□ -2.1
ZNF394Q53GI3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
ZNF394Q53GI3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
ZNF394Q53GI3 MIR377-201ENST00000362145 69 ntBASIC1.9□□□□□ -2.11
ZNF394Q53GI3 RNU4-69P-201ENST00000410677 143 ntBASIC1.9□□□□□ -2.11
ZNF394Q53GI3 RNA5SP33-201ENST00000516687 98 ntBASIC1.9□□□□□ -2.11
ZNF394Q53GI3 MIR4769-201ENST00000584126 77 ntBASIC1.9□□□□□ -2.11
ZNF394Q53GI3 AC084768.2-201ENST00000622736 221 ntBASIC1.9□□□□□ -2.11
ZNF394Q53GI3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.9□□□□□ -2.11
ZNF394Q53GI3 RNU6-880P-201ENST00000384526 107 ntBASIC1.89□□□□□ -2.11
ZNF394Q53GI3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.89□□□□□ -2.11
ZNF394Q53GI3 MIR1185-1-201ENST00000408598 86 ntBASIC1.89□□□□□ -2.11
ZNF394Q53GI3 AL591806.2-201ENST00000433122 173 ntBASIC1.89□□□□□ -2.11
ZNF394Q53GI3 RNU6-1258P-201ENST00000516911 111 ntBASIC1.89□□□□□ -2.11
ZNF394Q53GI3 MIR4679-2-201ENST00000578358 77 ntBASIC1.89□□□□□ -2.11
ZNF394Q53GI3 SNORD116-21-201ENST00000384507 92 ntBASIC1.88□□□□□ -2.11
ZNF394Q53GI3 SNORD77B-201ENST00000391112 67 ntBASIC1.88□□□□□ -2.11
ZNF394Q53GI3 RNU6-613P-201ENST00000410412 108 ntBASIC1.88□□□□□ -2.11
ZNF394Q53GI3 AC090844.1-201ENST00000422019 156 ntBASIC1.88□□□□□ -2.11
ZNF394Q53GI3 RNU6-548P-201ENST00000517083 115 ntBASIC1.88□□□□□ -2.11
ZNF394Q53GI3 AC022523.2-201ENST00000561045 150 ntBASIC1.88□□□□□ -2.11
ZNF394Q53GI3 RNU6-1104P-201ENST00000384723 104 ntBASIC1.87□□□□□ -2.11
ZNF394Q53GI3 RNU6-482P-201ENST00000391068 107 ntBASIC1.87□□□□□ -2.11
ZNF394Q53GI3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.87□□□□□ -2.11
ZNF394Q53GI3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.87□□□□□ -2.11
ZNF394Q53GI3 RNU6-970P-201ENST00000516312 107 ntBASIC1.87□□□□□ -2.11
ZNF394Q53GI3 AC015712.3-201ENST00000559380 164 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 214 ms