Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 RNU6-54P-201ENST00000365563 107 ntBASIC-3.49□□□□□ -2.97
TFF3Q07654 RNU6-1323P-201ENST00000384025 107 ntBASIC-3.49□□□□□ -2.97
TFF3Q07654 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.49□□□□□ -2.97
TFF3Q07654 SNORD63B-201ENST00000411005 70 ntBASIC-3.49□□□□□ -2.97
TFF3Q07654 RNU6-1003P-201ENST00000517099 105 ntBASIC-3.49□□□□□ -2.97
TFF3Q07654 Y_RNA.54-201ENST00000362766 105 ntBASIC-3.5□□□□□ -2.97
TFF3Q07654 SNORD115-30-201ENST00000364117 82 ntBASIC-3.5□□□□□ -2.97
TFF3Q07654 MTND4LP14-201ENST00000429447 288 ntBASIC-3.5□□□□□ -2.97
TFF3Q07654 FGF7P4-201ENST00000509595 295 ntBASIC-3.5□□□□□ -2.97
TFF3Q07654 RNU7-116P-201ENST00000516940 62 ntBASIC-3.5□□□□□ -2.97
TFF3Q07654 SCOCP1-201ENST00000554676 349 ntBASIC-3.5□□□□□ -2.97
TFF3Q07654 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-3.5□□□□□ -2.97
TFF3Q07654 RNU6-1317P-201ENST00000364582 104 ntBASIC-3.51□□□□□ -2.97
TFF3Q07654 Y_RNA.440-201ENST00000384120 114 ntBASIC-3.51□□□□□ -2.97
TFF3Q07654 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-3.51□□□□□ -2.97
TFF3Q07654 Y_RNA.613-201ENST00000410726 97 ntBASIC-3.51□□□□□ -2.97
TFF3Q07654 MIR2681-201ENST00000581814 105 ntBASIC-3.51□□□□□ -2.97
TFF3Q07654 MIR3123-201ENST00000583417 75 ntBASIC-3.51□□□□□ -2.97
TFF3Q07654 AC245884.10-201ENST00000597355 337 ntBASIC-3.51□□□□□ -2.97
TFF3Q07654 Y_RNA.76-201ENST00000362931 109 ntBASIC-3.52□□□□□ -2.97
TFF3Q07654 Y_RNA.501-201ENST00000384467 103 ntBASIC-3.52□□□□□ -2.97
TFF3Q07654 SNORD36C-201ENST00000516733 66 ntBASIC-3.52□□□□□ -2.97
TFF3Q07654 MIR302B-201ENST00000362188 73 ntBASIC-3.53□□□□□ -2.97
TFF3Q07654 RNU6-102P-201ENST00000384485 104 ntBASIC-3.53□□□□□ -2.97
TFF3Q07654 RNU4-70P-201ENST00000384579 139 ntBASIC-3.53□□□□□ -2.97
TFF3Q07654 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-3.53□□□□□ -2.97
TFF3Q07654 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-3.53□□□□□ -2.97
TFF3Q07654 RNU7-35P-201ENST00000517174 62 ntBASIC-3.53□□□□□ -2.97
TFF3Q07654 MTND4LP25-201ENST00000570218 163 ntBASIC-3.53□□□□□ -2.97
TFF3Q07654 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-3.53□□□□□ -2.97
TFF3Q07654 MIR5683-201ENST00000636514 76 ntBASIC-3.53□□□□□ -2.97
TFF3Q07654 MIR3674-201ENST00000636576 68 ntBASIC-3.53□□□□□ -2.97
TFF3Q07654 RNU6-1200P-201ENST00000384162 107 ntBASIC-3.54□□□□□ -2.98
TFF3Q07654 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.54□□□□□ -2.98
TFF3Q07654 PMCHL1-202ENST00000423102 261 ntBASIC-3.54□□□□□ -2.98
TFF3Q07654 Z82188.1-201ENST00000436709 154 ntBASIC-3.54□□□□□ -2.98
TFF3Q07654 CHEK2P4-201ENST00000450340 246 ntBASIC-3.54□□□□□ -2.98
TFF3Q07654 RNU2-31P-201ENST00000516954 155 ntBASIC-3.54□□□□□ -2.98
TFF3Q07654 RNU1-54P-201ENST00000517181 120 ntBASIC-3.54□□□□□ -2.98
TFF3Q07654 AC092807.2-201ENST00000609367 243 ntBASIC-3.54□□□□□ -2.98
TFF3Q07654 AC245297.2-201ENST00000610119 565 ntBASIC-3.54□□□□□ -2.98
TFF3Q07654 RNU6-1287P-201ENST00000362914 107 ntBASIC-3.55□□□□□ -2.98
TFF3Q07654 RNY4P9-201ENST00000363194 97 ntBASIC-3.55□□□□□ -2.98
TFF3Q07654 SNORA63.6-201ENST00000364921 119 ntBASIC-3.55□□□□□ -2.98
TFF3Q07654 Y_RNA.348-201ENST00000365403 103 ntBASIC-3.55□□□□□ -2.98
TFF3Q07654 RNU6-1060P-201ENST00000384664 107 ntBASIC-3.55□□□□□ -2.98
TFF3Q07654 SNORD73A-201ENST00000386062 65 ntBASIC-3.55□□□□□ -2.98
TFF3Q07654 RNU2-61P-201ENST00000411069 191 ntBASIC-3.55□□□□□ -2.98
TFF3Q07654 Y_RNA.698-201ENST00000516798 118 ntBASIC-3.55□□□□□ -2.98
TFF3Q07654 AC024909.2-201ENST00000553035 286 ntBASIC-3.55□□□□□ -2.98
TFF3Q07654 RNU6-224P-201ENST00000384055 107 ntBASIC-3.56□□□□□ -2.98
TFF3Q07654 Y_RNA.587-201ENST00000391210 103 ntBASIC-3.56□□□□□ -2.98
TFF3Q07654 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-3.56□□□□□ -2.98
TFF3Q07654 SNORD11-201ENST00000459124 84 ntBASIC-3.56□□□□□ -2.98
TFF3Q07654 AC022616.6-201ENST00000520479 119 ntBASIC-3.56□□□□□ -2.98
TFF3Q07654 RNU6-88P-201ENST00000606801 100 ntBASIC-3.56□□□□□ -2.98
TFF3Q07654 AC103591.3-201ENST00000608684 209 ntBASIC-3.56□□□□□ -2.98
TFF3Q07654 AC009878.1-201ENST00000621819 340 ntBASIC-3.56□□□□□ -2.98
TFF3Q07654 SNORA22.1-201ENST00000362701 134 ntBASIC-3.57□□□□□ -2.98
TFF3Q07654 RNU6-281P-201ENST00000384212 103 ntBASIC-3.57□□□□□ -2.98
TFF3Q07654 RNU6-298P-201ENST00000390888 96 ntBASIC-3.57□□□□□ -2.98
TFF3Q07654 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-3.57□□□□□ -2.98
TFF3Q07654 MTATP6P19-201ENST00000413797 659 ntBASIC-3.57□□□□□ -2.98
TFF3Q07654 RNU7-138P-201ENST00000459479 64 ntBASIC-3.57□□□□□ -2.98
TFF3Q07654 CLPTM1LP1-201ENST00000604519 484 ntBASIC-3.57□□□□□ -2.98
TFF3Q07654 AC026741.1-201ENST00000605892 482 ntBASIC-3.57□□□□□ -2.98
TFF3Q07654 RNU6-170P-201ENST00000362832 104 ntBASIC-3.58□□□□□ -2.98
TFF3Q07654 RNU4-1-201ENST00000363925 141 ntBASIC-3.58□□□□□ -2.98
TFF3Q07654 Y_RNA.399-201ENST00000383955 105 ntBASIC-3.58□□□□□ -2.98
TFF3Q07654 Y_RNA.558-201ENST00000384685 113 ntBASIC-3.58□□□□□ -2.98
TFF3Q07654 MTCO3P42-201ENST00000509488 518 ntBASIC-3.58□□□□□ -2.98
TFF3Q07654 AL158063.1-201ENST00000615349 536 ntBASIC-3.58□□□□□ -2.98
TFF3Q07654 AC084781.2-201ENST00000615568 161 ntBASIC-3.58□□□□□ -2.98
TFF3Q07654 RNU5F-6P-201ENST00000362979 116 ntBASIC-3.59□□□□□ -2.98
TFF3Q07654 Y_RNA.157-201ENST00000363638 102 ntBASIC-3.59□□□□□ -2.98
TFF3Q07654 MTND1P34-201ENST00000438556 671 ntBASIC-3.59□□□□□ -2.98
TFF3Q07654 AC073534.2-201ENST00000620377 381 ntBASIC-3.59□□□□□ -2.98
TFF3Q07654 SNORA20-201ENST00000384662 132 ntBASIC-3.6□□□□□ -2.99
TFF3Q07654 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-3.6□□□□□ -2.99
TFF3Q07654 SNRPGP8-201ENST00000454064 226 ntBASIC-3.6□□□□□ -2.99
TFF3Q07654 RNU7-137P-201ENST00000516788 62 ntBASIC-3.6□□□□□ -2.99
TFF3Q07654 AC144568.1-201ENST00000520139 137 ntBASIC-3.6□□□□□ -2.99
TFF3Q07654 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-3.6□□□□□ -2.99
TFF3Q07654 FGF7P2-201ENST00000332473 296 ntBASIC-3.61□□□□□ -2.99
TFF3Q07654 Y_RNA.207-201ENST00000364142 106 ntBASIC-3.61□□□□□ -2.99
TFF3Q07654 Y_RNA.248-201ENST00000364501 109 ntBASIC-3.61□□□□□ -2.99
TFF3Q07654 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-3.61□□□□□ -2.99
TFF3Q07654 RPL35AP4-201ENST00000412007 102 ntBASIC-3.61□□□□□ -2.99
TFF3Q07654 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-3.61□□□□□ -2.99
TFF3Q07654 AP002795.1-201ENST00000534879 84 ntBASIC-3.61□□□□□ -2.99
TFF3Q07654 AC122108.2-201ENST00000611946 526 ntBASIC-3.61□□□□□ -2.99
TFF3Q07654 Y_RNA.528-201ENST00000384575 108 ntBASIC-3.62□□□□□ -2.99
TFF3Q07654 RNU6-762P-201ENST00000517107 102 ntBASIC-3.62□□□□□ -2.99
TFF3Q07654 CPDP1-201ENST00000579660 283 ntBASIC-3.62□□□□□ -2.99
TFF3Q07654 SNORD50.1-201ENST00000362987 71 ntBASIC-3.63□□□□□ -2.99
TFF3Q07654 RNU6-1163P-201ENST00000364516 107 ntBASIC-3.63□□□□□ -2.99
TFF3Q07654 AL031003.1-201ENST00000404229 172 ntBASIC-3.63□□□□□ -2.99
TFF3Q07654 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-3.63□□□□□ -2.99
TFF3Q07654 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-3.63□□□□□ -2.99
TFF3Q07654 AP003357.1-201ENST00000604497 148 ntBASIC-3.63□□□□□ -2.99
Retrieved 100 of 98,524 protein–RNA pairs in 272.1 ms