Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 RNU6-915P-201ENST00000364943 103 ntBASIC1.2□□□□□ -2.22
RFC1P35251 RNU6-746P-201ENST00000384112 109 ntBASIC1.2□□□□□ -2.22
RFC1P35251 RNU6-187P-201ENST00000384139 106 ntBASIC1.2□□□□□ -2.22
RFC1P35251 Y_RNA.568-201ENST00000384742 113 ntBASIC1.2□□□□□ -2.22
RFC1P35251 AL603914.1-201ENST00000401964 204 ntBASIC1.2□□□□□ -2.22
RFC1P35251 AC244023.1-201ENST00000426884 112 ntBASIC1.2□□□□□ -2.22
RFC1P35251 SNORD79.1-201ENST00000516069 84 ntBASIC1.2□□□□□ -2.22
RFC1P35251 Y_RNA.703-201ENST00000516846 111 ntBASIC1.2□□□□□ -2.22
RFC1P35251 RNA5SP404-201ENST00000517118 132 ntBASIC1.2□□□□□ -2.22
RFC1P35251 MIR4498-201ENST00000577599 66 ntBASIC1.2□□□□□ -2.22
RFC1P35251 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.2□□□□□ -2.22
RFC1P35251 AC242498.1-201ENST00000604134 111 ntBASIC1.2□□□□□ -2.22
RFC1P35251 AL022345.2-201ENST00000606307 135 ntBASIC1.2□□□□□ -2.22
RFC1P35251 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.2□□□□□ -2.22
RFC1P35251 MIR6078-201ENST00000611069 100 ntBASIC1.2□□□□□ -2.22
RFC1P35251 MIR6717-201ENST00000622747 73 ntBASIC1.2□□□□□ -2.22
RFC1P35251 AP001340.1-201ENST00000624405 217 ntBASIC1.2□□□□□ -2.22
RFC1P35251 MIR302B-201ENST00000362188 73 ntBASIC1.19□□□□□ -2.22
RFC1P35251 RNU6-1319P-201ENST00000390855 104 ntBASIC1.19□□□□□ -2.22
RFC1P35251 RNU6-747P-201ENST00000390928 104 ntBASIC1.19□□□□□ -2.22
RFC1P35251 RNU6-241P-201ENST00000391148 104 ntBASIC1.19□□□□□ -2.22
RFC1P35251 RNU6-602P-201ENST00000411155 105 ntBASIC1.19□□□□□ -2.22
RFC1P35251 RNU6-177P-201ENST00000411257 104 ntBASIC1.19□□□□□ -2.22
RFC1P35251 AL591704.2-201ENST00000421658 181 ntBASIC1.19□□□□□ -2.22
RFC1P35251 SUMO1P3-201ENST00000439961 304 ntBASIC1.19□□□□□ -2.22
RFC1P35251 Y_RNA.690-201ENST00000516603 95 ntBASIC1.19□□□□□ -2.22
RFC1P35251 RNU11-2P-201ENST00000516898 142 ntBASIC1.19□□□□□ -2.22
RFC1P35251 RNU7-70P-201ENST00000516941 66 ntBASIC1.19□□□□□ -2.22
RFC1P35251 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.19□□□□□ -2.22
RFC1P35251 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
RFC1P35251 RNU4-16P-201ENST00000364737 141 ntBASIC1.18□□□□□ -2.22
RFC1P35251 RNY1P6-201ENST00000384193 109 ntBASIC1.18□□□□□ -2.22
RFC1P35251 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
RFC1P35251 RNU7-21P-201ENST00000459430 62 ntBASIC1.18□□□□□ -2.22
RFC1P35251 MIR3121-201ENST00000579680 77 ntBASIC1.18□□□□□ -2.22
RFC1P35251 SEPT14P17-201ENST00000617978 177 ntBASIC1.18□□□□□ -2.22
RFC1P35251 AC021613.1-201ENST00000623880 111 ntBASIC1.18□□□□□ -2.22
RFC1P35251 AC027335.2-201ENST00000624030 375 ntBASIC1.18□□□□□ -2.22
RFC1P35251 MIR6841-201ENST00000637129 72 ntBASIC1.18□□□□□ -2.22
RFC1P35251 AC010332.2-201ENST00000613083 1904 ntBASIC1.17□□□□□ -2.22
RFC1P35251 Y_RNA.327-201ENST00000365201 102 ntBASIC1.17□□□□□ -2.22
RFC1P35251 RNU6-396P-201ENST00000365369 105 ntBASIC1.17□□□□□ -2.22
RFC1P35251 MIR222-201ENST00000384992 110 ntBASIC1.17□□□□□ -2.22
RFC1P35251 MIR1285-1-201ENST00000408593 84 ntBASIC1.17□□□□□ -2.22
RFC1P35251 RNA5SP95-201ENST00000410319 137 ntBASIC1.17□□□□□ -2.22
RFC1P35251 MTND4LP9-201ENST00000427694 174 ntBASIC1.17□□□□□ -2.22
RFC1P35251 MTATP6P21-201ENST00000440681 189 ntBASIC1.17□□□□□ -2.22
RFC1P35251 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.17□□□□□ -2.22
RFC1P35251 SNORA70.22-201ENST00000517160 124 ntBASIC1.17□□□□□ -2.22
RFC1P35251 AL359821.1-201ENST00000605519 182 ntBASIC1.17□□□□□ -2.22
RFC1P35251 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
RFC1P35251 SNORA1.1-201ENST00000364671 133 ntBASIC1.16□□□□□ -2.22
RFC1P35251 Y_RNA.294-201ENST00000364916 102 ntBASIC1.16□□□□□ -2.22
RFC1P35251 SNORD18B-201ENST00000365659 72 ntBASIC1.16□□□□□ -2.22
RFC1P35251 Y_RNA.430-201ENST00000384081 110 ntBASIC1.16□□□□□ -2.22
RFC1P35251 SNORA80D-201ENST00000384488 135 ntBASIC1.16□□□□□ -2.22
RFC1P35251 RNU6-257P-201ENST00000410238 98 ntBASIC1.16□□□□□ -2.22
RFC1P35251 RNU6-613P-201ENST00000410412 108 ntBASIC1.16□□□□□ -2.22
RFC1P35251 POLR2J4-204ENST00000418424 324 ntBASIC1.16□□□□□ -2.22
RFC1P35251 OR2A41P-201ENST00000473586 105 ntBASIC1.16□□□□□ -2.22
RFC1P35251 AC108729.3-201ENST00000513484 108 ntBASIC1.16□□□□□ -2.22
RFC1P35251 RNU6-1258P-201ENST00000516911 111 ntBASIC1.16□□□□□ -2.22
RFC1P35251 AP001328.1-201ENST00000528550 176 ntBASIC1.16□□□□□ -2.22
RFC1P35251 AC108081.1-201ENST00000604358 221 ntBASIC1.16□□□□□ -2.22
RFC1P35251 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
RFC1P35251 RNU1-124P-201ENST00000363861 145 ntBASIC1.15□□□□□ -2.23
RFC1P35251 Y_RNA.280-201ENST00000364765 112 ntBASIC1.15□□□□□ -2.23
RFC1P35251 Y_RNA.330-201ENST00000365230 109 ntBASIC1.15□□□□□ -2.23
RFC1P35251 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.15□□□□□ -2.23
RFC1P35251 RPS23P4-201ENST00000487908 423 ntBASIC1.15□□□□□ -2.23
RFC1P35251 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.15□□□□□ -2.23
RFC1P35251 RNU6-240P-201ENST00000516098 97 ntBASIC1.15□□□□□ -2.23
RFC1P35251 MIR2115-201ENST00000516657 100 ntBASIC1.15□□□□□ -2.23
RFC1P35251 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.15□□□□□ -2.23
RFC1P35251 AC011603.4-201ENST00000611325 277 ntBASIC1.15□□□□□ -2.23
RFC1P35251 RNU6-392P-201ENST00000364926 101 ntBASIC1.14□□□□□ -2.23
RFC1P35251 Y_RNA.343-201ENST00000365354 112 ntBASIC1.14□□□□□ -2.23
RFC1P35251 RNU6-53P-201ENST00000365367 106 ntBASIC1.14□□□□□ -2.23
RFC1P35251 MIR548M-201ENST00000408260 86 ntBASIC1.14□□□□□ -2.23
RFC1P35251 RPS3AP1-201ENST00000413190 320 ntBASIC1.14□□□□□ -2.23
RFC1P35251 AC002429.1-201ENST00000437672 148 ntBASIC1.14□□□□□ -2.23
RFC1P35251 AC036111.3-201ENST00000526389 112 ntBASIC1.14□□□□□ -2.23
RFC1P35251 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.14□□□□□ -2.23
RFC1P35251 AC008163.1-202ENST00000636004 2889 ntBASIC1.14□□□□□ -2.23
RFC1P35251 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.13□□□□□ -2.23
RFC1P35251 RNU6-580P-201ENST00000365159 107 ntBASIC1.13□□□□□ -2.23
RFC1P35251 Y_RNA.366-201ENST00000365540 102 ntBASIC1.13□□□□□ -2.23
RFC1P35251 SNORD38B-201ENST00000384690 67 ntBASIC1.13□□□□□ -2.23
RFC1P35251 SNORD12C-201ENST00000386307 89 ntBASIC1.13□□□□□ -2.23
RFC1P35251 MT-TN-201ENST00000387400 73 ntBASIC1.13□□□□□ -2.23
RFC1P35251 RNU6-205P-201ENST00000390858 107 ntBASIC1.13□□□□□ -2.23
RFC1P35251 SNORD12-201ENST00000391002 90 ntBASIC1.13□□□□□ -2.23
RFC1P35251 Y_RNA.586-201ENST00000391146 98 ntBASIC1.13□□□□□ -2.23
RFC1P35251 RNA5SP144-201ENST00000410846 116 ntBASIC1.13□□□□□ -2.23
RFC1P35251 MRPL35P3-201ENST00000421557 364 ntBASIC1.13□□□□□ -2.23
RFC1P35251 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.13□□□□□ -2.23
RFC1P35251 RPS29P28-201ENST00000446439 141 ntBASIC1.13□□□□□ -2.23
RFC1P35251 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.13□□□□□ -2.23
RFC1P35251 RNU6-113P-201ENST00000516653 101 ntBASIC1.13□□□□□ -2.23
RFC1P35251 IGKV1-22-201ENST00000524313 326 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms