Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
SRGAP3O43295 RNY3P2-201ENST00000362918 102 ntBASIC2.16□□□□□ -2.06
SRGAP3O43295 SNORD73B-201ENST00000364394 72 ntBASIC2.16□□□□□ -2.06
SRGAP3O43295 Y_RNA.299-201ENST00000364973 94 ntBASIC2.16□□□□□ -2.06
SRGAP3O43295 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.16□□□□□ -2.06
SRGAP3O43295 RNU4-69P-201ENST00000410677 143 ntBASIC2.16□□□□□ -2.06
SRGAP3O43295 RNA5SP33-201ENST00000516687 98 ntBASIC2.16□□□□□ -2.06
SRGAP3O43295 MIR514B-201ENST00000516774 80 ntBASIC2.16□□□□□ -2.06
SRGAP3O43295 RNU6-1258P-201ENST00000516911 111 ntBASIC2.16□□□□□ -2.06
SRGAP3O43295 FAM71BP1-201ENST00000604431 523 ntBASIC2.16□□□□□ -2.06
SRGAP3O43295 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
SRGAP3O43295 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
SRGAP3O43295 SNORD115-19-201ENST00000363098 82 ntBASIC2.15□□□□□ -2.07
SRGAP3O43295 SNORD115-18-201ENST00000363293 82 ntBASIC2.15□□□□□ -2.07
SRGAP3O43295 SNORA3A-201ENST00000364113 130 ntBASIC2.15□□□□□ -2.07
SRGAP3O43295 Y_RNA.220-201ENST00000364244 109 ntBASIC2.15□□□□□ -2.07
SRGAP3O43295 RNU4-67P-201ENST00000364569 141 ntBASIC2.15□□□□□ -2.07
SRGAP3O43295 SNORD115-17-201ENST00000364612 82 ntBASIC2.15□□□□□ -2.07
SRGAP3O43295 Y_RNA.470-201ENST00000384307 117 ntBASIC2.15□□□□□ -2.07
SRGAP3O43295 RNU6-913P-201ENST00000390913 95 ntBASIC2.15□□□□□ -2.07
SRGAP3O43295 RNA5SP261-201ENST00000410536 106 ntBASIC2.15□□□□□ -2.07
SRGAP3O43295 RNA5SP450-201ENST00000411206 102 ntBASIC2.15□□□□□ -2.07
SRGAP3O43295 RPS3AP1-201ENST00000413190 320 ntBASIC2.15□□□□□ -2.07
SRGAP3O43295 MTATP8P2-201ENST00000435212 202 ntBASIC2.15□□□□□ -2.07
SRGAP3O43295 DNAJC19P9-201ENST00000555084 351 ntBASIC2.15□□□□□ -2.07
SRGAP3O43295 MIR548AE2-201ENST00000583456 67 ntBASIC2.15□□□□□ -2.07
SRGAP3O43295 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
SRGAP3O43295 MIR424-201ENST00000362227 98 ntBASIC2.14□□□□□ -2.07
SRGAP3O43295 RNU6-457P-201ENST00000363999 107 ntBASIC2.14□□□□□ -2.07
SRGAP3O43295 RNU6-409P-201ENST00000384114 104 ntBASIC2.14□□□□□ -2.07
SRGAP3O43295 Y_RNA.558-201ENST00000384685 113 ntBASIC2.14□□□□□ -2.07
SRGAP3O43295 RNY1P7-201ENST00000384743 110 ntBASIC2.14□□□□□ -2.07
SRGAP3O43295 SNORD77B-201ENST00000391112 67 ntBASIC2.14□□□□□ -2.07
SRGAP3O43295 MIR1302-4-201ENST00000408701 150 ntBASIC2.14□□□□□ -2.07
SRGAP3O43295 RNU6-733P-201ENST00000410759 104 ntBASIC2.14□□□□□ -2.07
SRGAP3O43295 RNA5SP100-201ENST00000410903 110 ntBASIC2.14□□□□□ -2.07
SRGAP3O43295 RNA5SP59-201ENST00000410922 110 ntBASIC2.14□□□□□ -2.07
SRGAP3O43295 RPL23AP6-201ENST00000446637 472 ntBASIC2.14□□□□□ -2.07
SRGAP3O43295 HMGN2P23-201ENST00000456759 269 ntBASIC2.14□□□□□ -2.07
SRGAP3O43295 snoU13.23-201ENST00000458863 104 ntBASIC2.14□□□□□ -2.07
SRGAP3O43295 RNU2-13P-201ENST00000515909 113 ntBASIC2.14□□□□□ -2.07
SRGAP3O43295 SNORA31.17-201ENST00000516953 127 ntBASIC2.14□□□□□ -2.07
SRGAP3O43295 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.14□□□□□ -2.07
SRGAP3O43295 AC012493.3-201ENST00000604494 112 ntBASIC2.14□□□□□ -2.07
SRGAP3O43295 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.14□□□□□ -2.07
SRGAP3O43295 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.14□□□□□ -2.07
SRGAP3O43295 MIR2052-201ENST00000636055 55 ntBASIC2.14□□□□□ -2.07
SRGAP3O43295 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SRGAP3O43295 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
SRGAP3O43295 SNORD48-201ENST00000364953 64 ntBASIC2.13□□□□□ -2.07
SRGAP3O43295 SNORA32-201ENST00000384072 121 ntBASIC2.13□□□□□ -2.07
SRGAP3O43295 SNORA24-201ENST00000384096 131 ntBASIC2.13□□□□□ -2.07
SRGAP3O43295 RNU6-1067P-201ENST00000384752 107 ntBASIC2.13□□□□□ -2.07
SRGAP3O43295 SNORA26.6-201ENST00000391256 115 ntBASIC2.13□□□□□ -2.07
SRGAP3O43295 SNORA7.5-201ENST00000410672 110 ntBASIC2.13□□□□□ -2.07
SRGAP3O43295 HMGN1P33-201ENST00000432945 451 ntBASIC2.13□□□□□ -2.07
SRGAP3O43295 RNA5SP57-201ENST00000459463 123 ntBASIC2.13□□□□□ -2.07
SRGAP3O43295 RPS27P21-201ENST00000486977 252 ntBASIC2.13□□□□□ -2.07
SRGAP3O43295 SCARNA23-201ENST00000516060 130 ntBASIC2.13□□□□□ -2.07
SRGAP3O43295 RNU6-548P-201ENST00000517083 115 ntBASIC2.13□□□□□ -2.07
SRGAP3O43295 RNU6-158P-201ENST00000517104 100 ntBASIC2.13□□□□□ -2.07
SRGAP3O43295 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.13□□□□□ -2.07
SRGAP3O43295 AC015712.3-201ENST00000559380 164 ntBASIC2.13□□□□□ -2.07
SRGAP3O43295 DEFB122-202ENST00000569013 197 ntBASIC2.13□□□□□ -2.07
SRGAP3O43295 MIR4529-201ENST00000578110 78 ntBASIC2.13□□□□□ -2.07
SRGAP3O43295 AL020996.3-201ENST00000606617 222 ntBASIC2.13□□□□□ -2.07
SRGAP3O43295 MIR6717-201ENST00000622747 73 ntBASIC2.13□□□□□ -2.07
SRGAP3O43295 MIR6841-201ENST00000637129 72 ntBASIC2.13□□□□□ -2.07
SRGAP3O43295 RNU6-363P-201ENST00000362895 105 ntBASIC2.12□□□□□ -2.07
SRGAP3O43295 RNA5SP99-201ENST00000364020 114 ntBASIC2.12□□□□□ -2.07
SRGAP3O43295 Y_RNA.360-201ENST00000365512 102 ntBASIC2.12□□□□□ -2.07
SRGAP3O43295 RNU1-52P-201ENST00000384190 164 ntBASIC2.12□□□□□ -2.07
SRGAP3O43295 RNU6-616P-201ENST00000384353 107 ntBASIC2.12□□□□□ -2.07
SRGAP3O43295 MIR524-201ENST00000385242 87 ntBASIC2.12□□□□□ -2.07
SRGAP3O43295 RNU7-73P-201ENST00000458743 63 ntBASIC2.12□□□□□ -2.07
SRGAP3O43295 SNORA25.15-201ENST00000516487 89 ntBASIC2.12□□□□□ -2.07
SRGAP3O43295 RNU7-193P-201ENST00000516723 65 ntBASIC2.12□□□□□ -2.07
SRGAP3O43295 RNU6-762P-201ENST00000517107 102 ntBASIC2.12□□□□□ -2.07
SRGAP3O43295 MALAT1.1-201ENST00000618249 95 ntBASIC2.12□□□□□ -2.07
SRGAP3O43295 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
SRGAP3O43295 Y_RNA.93-201ENST00000363066 109 ntBASIC2.11□□□□□ -2.07
SRGAP3O43295 RNU6-1099P-201ENST00000363533 107 ntBASIC2.11□□□□□ -2.07
SRGAP3O43295 MIR605-201ENST00000385078 83 ntBASIC2.11□□□□□ -2.07
SRGAP3O43295 SNORA31.25-201ENST00000517242 134 ntBASIC2.11□□□□□ -2.07
SRGAP3O43295 MIR4694-201ENST00000578534 80 ntBASIC2.11□□□□□ -2.07
SRGAP3O43295 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.11□□□□□ -2.07
SRGAP3O43295 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
SRGAP3O43295 Y_RNA.10-201ENST00000362371 110 ntBASIC2.1□□□□□ -2.07
SRGAP3O43295 Y_RNA.537-201ENST00000384626 109 ntBASIC2.1□□□□□ -2.07
SRGAP3O43295 MIR577-201ENST00000385196 96 ntBASIC2.1□□□□□ -2.07
SRGAP3O43295 AC108210.2-201ENST00000503681 201 ntBASIC2.1□□□□□ -2.07
SRGAP3O43295 SNORA74.3-201ENST00000517108 154 ntBASIC2.1□□□□□ -2.07
SRGAP3O43295 AL442128.1-201ENST00000615151 90 ntBASIC2.1□□□□□ -2.07
SRGAP3O43295 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.1□□□□□ -2.07
SRGAP3O43295 SNORD115-2-201ENST00000362842 82 ntBASIC2.09□□□□□ -2.07
SRGAP3O43295 SNORA1.1-201ENST00000364671 133 ntBASIC2.09□□□□□ -2.07
SRGAP3O43295 SNORD115-20-201ENST00000365099 82 ntBASIC2.09□□□□□ -2.07
SRGAP3O43295 Y_RNA.342-201ENST00000365352 113 ntBASIC2.09□□□□□ -2.07
SRGAP3O43295 SNORA26.2-201ENST00000390922 122 ntBASIC2.09□□□□□ -2.07
SRGAP3O43295 Y_RNA.601-201ENST00000410500 113 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 252 ms