Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 MIR376A1-201ENST00000616574 68 ntBASIC-0.41□□□□□ -2.48
LSM1O15116 MIR342-201ENST00000362212 99 ntBASIC-0.42□□□□□ -2.48
LSM1O15116 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.42□□□□□ -2.48
LSM1O15116 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.42□□□□□ -2.48
LSM1O15116 AC098614.3-201ENST00000438957 440 ntBASIC-0.42□□□□□ -2.48
LSM1O15116 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.42□□□□□ -2.48
LSM1O15116 RNU6-976P-201ENST00000516086 111 ntBASIC-0.42□□□□□ -2.48
LSM1O15116 RNA5SP153-201ENST00000516498 76 ntBASIC-0.42□□□□□ -2.48
LSM1O15116 SNORA25.16-201ENST00000516741 121 ntBASIC-0.42□□□□□ -2.48
LSM1O15116 MIR548AD-201ENST00000584780 82 ntBASIC-0.42□□□□□ -2.48
LSM1O15116 AL008718.3-201ENST00000610217 321 ntBASIC-0.42□□□□□ -2.48
LSM1O15116 MIR302B-201ENST00000362188 73 ntBASIC-0.43□□□□□ -2.48
LSM1O15116 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.43□□□□□ -2.48
LSM1O15116 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.43□□□□□ -2.48
LSM1O15116 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.43□□□□□ -2.48
LSM1O15116 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.43□□□□□ -2.48
LSM1O15116 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.43□□□□□ -2.48
LSM1O15116 MIR1302-11-201ENST00000408051 138 ntBASIC-0.43□□□□□ -2.48
LSM1O15116 MIR1302-9-201ENST00000408365 138 ntBASIC-0.43□□□□□ -2.48
LSM1O15116 MIR1302-10-201ENST00000408734 138 ntBASIC-0.43□□□□□ -2.48
LSM1O15116 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.43□□□□□ -2.48
LSM1O15116 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.43□□□□□ -2.48
LSM1O15116 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.43□□□□□ -2.48
LSM1O15116 AL133255.1-201ENST00000606374 441 ntBASIC-0.43□□□□□ -2.48
LSM1O15116 MIR1302-2-201ENST00000607096 138 ntBASIC-0.43□□□□□ -2.48
LSM1O15116 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.43□□□□□ -2.48
LSM1O15116 AC091932.4-201ENST00000623386 200 ntBASIC-0.43□□□□□ -2.48
LSM1O15116 AL162376.1-201ENST00000624117 175 ntBASIC-0.43□□□□□ -2.48
LSM1O15116 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.44□□□□□ -2.48
LSM1O15116 RNA5SP245-201ENST00000364239 121 ntBASIC-0.44□□□□□ -2.48
LSM1O15116 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.44□□□□□ -2.48
LSM1O15116 RNU6-726P-201ENST00000364680 107 ntBASIC-0.44□□□□□ -2.48
LSM1O15116 SNORA1-201ENST00000384107 130 ntBASIC-0.44□□□□□ -2.48
LSM1O15116 MIR214-201ENST00000385214 110 ntBASIC-0.44□□□□□ -2.48
LSM1O15116 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.44□□□□□ -2.48
LSM1O15116 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.44□□□□□ -2.48
LSM1O15116 SNORD19B-201ENST00000459623 84 ntBASIC-0.44□□□□□ -2.48
LSM1O15116 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.44□□□□□ -2.48
LSM1O15116 MIR6779-201ENST00000617283 64 ntBASIC-0.44□□□□□ -2.48
LSM1O15116 MIR1302-1-201ENST00000637932 143 ntBASIC-0.44□□□□□ -2.48
LSM1O15116 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.45□□□□□ -2.48
LSM1O15116 RNU4-10P-201ENST00000364383 140 ntBASIC-0.45□□□□□ -2.48
LSM1O15116 RNY1P13-201ENST00000365030 105 ntBASIC-0.45□□□□□ -2.48
LSM1O15116 RNU6-652P-201ENST00000365488 107 ntBASIC-0.45□□□□□ -2.48
LSM1O15116 SNORA72.6-201ENST00000384520 129 ntBASIC-0.45□□□□□ -2.48
LSM1O15116 AC138393.2-201ENST00000414742 246 ntBASIC-0.45□□□□□ -2.48
LSM1O15116 RNU7-80P-201ENST00000459562 61 ntBASIC-0.45□□□□□ -2.48
LSM1O15116 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.45□□□□□ -2.48
LSM1O15116 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
LSM1O15116 MIR5706-201ENST00000579841 80 ntBASIC-0.45□□□□□ -2.48
LSM1O15116 MIR5197-201ENST00000583721 112 ntBASIC-0.45□□□□□ -2.48
LSM1O15116 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.46□□□□□ -2.48
LSM1O15116 MTND4LP30-201ENST00000454092 297 ntBASIC-0.46□□□□□ -2.48
LSM1O15116 FGF7P4-201ENST00000509595 295 ntBASIC-0.46□□□□□ -2.48
LSM1O15116 RNU6-180P-201ENST00000516697 61 ntBASIC-0.46□□□□□ -2.48
LSM1O15116 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.46□□□□□ -2.48
LSM1O15116 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.47□□□□□ -2.48
LSM1O15116 SNORA18.1-201ENST00000363418 128 ntBASIC-0.47□□□□□ -2.48
LSM1O15116 RNU6-290P-201ENST00000365212 101 ntBASIC-0.47□□□□□ -2.48
LSM1O15116 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.47□□□□□ -2.48
LSM1O15116 MIR329-2-201ENST00000385029 84 ntBASIC-0.47□□□□□ -2.48
LSM1O15116 AL731563.1-201ENST00000442202 214 ntBASIC-0.47□□□□□ -2.48
LSM1O15116 SNORD4A-201ENST00000459174 72 ntBASIC-0.47□□□□□ -2.48
LSM1O15116 RNU6-507P-201ENST00000516045 100 ntBASIC-0.47□□□□□ -2.48
LSM1O15116 snoU18.1-201ENST00000629629 71 ntBASIC-0.47□□□□□ -2.48
LSM1O15116 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.48□□□□□ -2.49
LSM1O15116 SNORA63.7-201ENST00000365579 123 ntBASIC-0.48□□□□□ -2.49
LSM1O15116 RNY3P5-201ENST00000384127 102 ntBASIC-0.48□□□□□ -2.49
LSM1O15116 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.48□□□□□ -2.49
LSM1O15116 RNU6-662P-201ENST00000384253 104 ntBASIC-0.48□□□□□ -2.49
LSM1O15116 MIR626-201ENST00000385032 94 ntBASIC-0.48□□□□□ -2.49
LSM1O15116 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.48□□□□□ -2.49
LSM1O15116 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.48□□□□□ -2.49
LSM1O15116 SNRPGP8-201ENST00000454064 226 ntBASIC-0.48□□□□□ -2.49
LSM1O15116 AL360085.1-201ENST00000604713 532 ntBASIC-0.48□□□□□ -2.49
LSM1O15116 SNORA70.25-201ENST00000612741 95 ntBASIC-0.48□□□□□ -2.49
LSM1O15116 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.49□□□□□ -2.49
LSM1O15116 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.49□□□□□ -2.49
LSM1O15116 SNORA22.1-201ENST00000362701 134 ntBASIC-0.49□□□□□ -2.49
LSM1O15116 RNU4-73P-201ENST00000363164 141 ntBASIC-0.49□□□□□ -2.49
LSM1O15116 RNU6-326P-201ENST00000365480 107 ntBASIC-0.49□□□□□ -2.49
LSM1O15116 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.49□□□□□ -2.49
LSM1O15116 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.49□□□□□ -2.49
LSM1O15116 AC108059.2-201ENST00000434626 151 ntBASIC-0.49□□□□□ -2.49
LSM1O15116 TRBVB-201ENST00000477100 408 ntBASIC-0.49□□□□□ -2.49
LSM1O15116 SNORA27.4-201ENST00000516650 95 ntBASIC-0.49□□□□□ -2.49
LSM1O15116 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.49□□□□□ -2.49
LSM1O15116 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.5□□□□□ -2.49
LSM1O15116 SNORA63.5-201ENST00000363548 123 ntBASIC-0.5□□□□□ -2.49
LSM1O15116 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.5□□□□□ -2.49
LSM1O15116 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.5□□□□□ -2.49
LSM1O15116 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.5□□□□□ -2.49
LSM1O15116 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.5□□□□□ -2.49
LSM1O15116 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.5□□□□□ -2.49
LSM1O15116 SNORA18-201ENST00000384416 132 ntBASIC-0.5□□□□□ -2.49
LSM1O15116 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.5□□□□□ -2.49
LSM1O15116 SNORA8.3-201ENST00000384679 139 ntBASIC-0.5□□□□□ -2.49
LSM1O15116 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.5□□□□□ -2.49
LSM1O15116 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.5□□□□□ -2.49
LSM1O15116 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 235.5 ms