Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SOX1O00570 AP000648.3-201ENST00000623539 4507 ntBASIC2.49□□□□□ -2.01
SOX1O00570 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.49□□□□□ -2.01
SOX1O00570 Y_RNA.17-201ENST00000362433 111 ntBASIC2.49□□□□□ -2.01
SOX1O00570 RNU6-457P-201ENST00000363999 107 ntBASIC2.49□□□□□ -2.01
SOX1O00570 RNU6-1201P-201ENST00000384227 107 ntBASIC2.49□□□□□ -2.01
SOX1O00570 MIR4777-201ENST00000583710 86 ntBASIC2.49□□□□□ -2.01
SOX1O00570 FAM106DP-201ENST00000586416 501 ntBASIC2.49□□□□□ -2.01
SOX1O00570 AC096720.1-201ENST00000604441 183 ntBASIC2.49□□□□□ -2.01
SOX1O00570 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.49□□□□□ -2.01
SOX1O00570 MIR6733-201ENST00000635723 61 ntBASIC2.49□□□□□ -2.01
SOX1O00570 MIR1245B-201ENST00000636115 69 ntBASIC2.49□□□□□ -2.01
SOX1O00570 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SOX1O00570 Y_RNA.95-201ENST00000363079 95 ntBASIC2.48□□□□□ -2.01
SOX1O00570 RNA5SP456-201ENST00000364002 114 ntBASIC2.48□□□□□ -2.01
SOX1O00570 AL451046.2-201ENST00000403074 277 ntBASIC2.48□□□□□ -2.01
SOX1O00570 RNU6-592P-201ENST00000411333 103 ntBASIC2.48□□□□□ -2.01
SOX1O00570 RNA5SP270-201ENST00000411361 118 ntBASIC2.48□□□□□ -2.01
SOX1O00570 RPL23AP6-201ENST00000446637 472 ntBASIC2.48□□□□□ -2.01
SOX1O00570 Y_RNA.659-201ENST00000515994 113 ntBASIC2.48□□□□□ -2.01
SOX1O00570 SNORA74.3-201ENST00000517108 154 ntBASIC2.48□□□□□ -2.01
SOX1O00570 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SOX1O00570 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
SOX1O00570 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SOX1O00570 RNU6-1313P-201ENST00000362622 102 ntBASIC2.47□□□□□ -2.01
SOX1O00570 Y_RNA.354-201ENST00000365448 111 ntBASIC2.47□□□□□ -2.01
SOX1O00570 SNORA32-201ENST00000384072 121 ntBASIC2.47□□□□□ -2.01
SOX1O00570 RNU6-1275P-201ENST00000391087 107 ntBASIC2.47□□□□□ -2.01
SOX1O00570 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.47□□□□□ -2.01
SOX1O00570 Y_RNA.593-201ENST00000410292 98 ntBASIC2.47□□□□□ -2.01
SOX1O00570 RNU6-162P-201ENST00000516228 103 ntBASIC2.47□□□□□ -2.01
SOX1O00570 Y_RNA.685-201ENST00000516532 108 ntBASIC2.47□□□□□ -2.01
SOX1O00570 AC022254.1-201ENST00000567857 235 ntBASIC2.47□□□□□ -2.01
SOX1O00570 MIR548Z-201ENST00000584743 97 ntBASIC2.47□□□□□ -2.01
SOX1O00570 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SOX1O00570 SNORA1.1-201ENST00000364671 133 ntBASIC2.46□□□□□ -2.02
SOX1O00570 SNORD115-35-201ENST00000365122 82 ntBASIC2.46□□□□□ -2.02
SOX1O00570 RNU6-360P-201ENST00000390944 104 ntBASIC2.46□□□□□ -2.02
SOX1O00570 RNA5SP210-201ENST00000391034 120 ntBASIC2.46□□□□□ -2.02
SOX1O00570 Y_RNA.705-201ENST00000516862 110 ntBASIC2.46□□□□□ -2.02
SOX1O00570 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.46□□□□□ -2.02
SOX1O00570 IGLL4P-201ENST00000614590 133 ntBASIC2.46□□□□□ -2.02
SOX1O00570 MIR6779-201ENST00000617283 64 ntBASIC2.46□□□□□ -2.02
SOX1O00570 AC091304.10-201ENST00000641554 121 ntBASIC2.46□□□□□ -2.02
SOX1O00570 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
SOX1O00570 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SOX1O00570 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
SOX1O00570 RNA5SP100-201ENST00000410903 110 ntBASIC2.45□□□□□ -2.02
SOX1O00570 RNA5SP59-201ENST00000410922 110 ntBASIC2.45□□□□□ -2.02
SOX1O00570 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.45□□□□□ -2.02
SOX1O00570 RNU7-43P-201ENST00000516554 64 ntBASIC2.45□□□□□ -2.02
SOX1O00570 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.45□□□□□ -2.02
SOX1O00570 MIR4439-201ENST00000583746 80 ntBASIC2.45□□□□□ -2.02
SOX1O00570 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.45□□□□□ -2.02
SOX1O00570 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.45□□□□□ -2.02
SOX1O00570 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.45□□□□□ -2.02
SOX1O00570 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.45□□□□□ -2.02
SOX1O00570 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SOX1O00570 Y_RNA.219-201ENST00000364232 113 ntBASIC2.44□□□□□ -2.02
SOX1O00570 RNY1P1-201ENST00000364372 112 ntBASIC2.44□□□□□ -2.02
SOX1O00570 RNU1-138P-201ENST00000384093 164 ntBASIC2.44□□□□□ -2.02
SOX1O00570 MIR221-201ENST00000385135 110 ntBASIC2.44□□□□□ -2.02
SOX1O00570 RNU6-972P-201ENST00000391208 107 ntBASIC2.44□□□□□ -2.02
SOX1O00570 HMGN1P33-201ENST00000432945 451 ntBASIC2.44□□□□□ -2.02
SOX1O00570 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
SOX1O00570 MIR583-201ENST00000384846 75 ntBASIC2.43□□□□□ -2.02
SOX1O00570 RNU6-887P-201ENST00000410660 100 ntBASIC2.43□□□□□ -2.02
SOX1O00570 AP1B1P2-201ENST00000416196 106 ntBASIC2.43□□□□□ -2.02
SOX1O00570 AC245047.7-201ENST00000440265 293 ntBASIC2.43□□□□□ -2.02
SOX1O00570 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.43□□□□□ -2.02
SOX1O00570 RNU7-2P-201ENST00000516096 62 ntBASIC2.43□□□□□ -2.02
SOX1O00570 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.43□□□□□ -2.02
SOX1O00570 MIR5007-201ENST00000583098 95 ntBASIC2.43□□□□□ -2.02
SOX1O00570 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SOX1O00570 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.42□□□□□ -2.02
SOX1O00570 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.42□□□□□ -2.02
SOX1O00570 SNORD78.1-201ENST00000390866 65 ntBASIC2.42□□□□□ -2.02
SOX1O00570 RNU6-638P-201ENST00000516582 104 ntBASIC2.42□□□□□ -2.02
SOX1O00570 MIR4764-201ENST00000580680 88 ntBASIC2.42□□□□□ -2.02
SOX1O00570 Z97988.1-201ENST00000637697 135 ntBASIC2.42□□□□□ -2.02
SOX1O00570 Z82195.2-201ENST00000612348 18351 ntBASIC2.42□□□□□ -2.02
SOX1O00570 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
SOX1O00570 RNU6-1123P-201ENST00000362347 106 ntBASIC2.41□□□□□ -2.02
SOX1O00570 Y_RNA.190-201ENST00000363964 101 ntBASIC2.41□□□□□ -2.02
SOX1O00570 Y_RNA.467-201ENST00000384297 102 ntBASIC2.41□□□□□ -2.02
SOX1O00570 SNORD116-22-201ENST00000384430 92 ntBASIC2.41□□□□□ -2.02
SOX1O00570 RNU4-62P-201ENST00000410125 130 ntBASIC2.41□□□□□ -2.02
SOX1O00570 RNU2-40P-201ENST00000410833 196 ntBASIC2.41□□□□□ -2.02
SOX1O00570 RNU7-35P-201ENST00000517174 62 ntBASIC2.41□□□□□ -2.02
SOX1O00570 SNORD14A-201ENST00000606526 91 ntBASIC2.41□□□□□ -2.02
SOX1O00570 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SOX1O00570 AC005336.3-201ENST00000623833 2679 ntBASIC2.41□□□□□ -2.02
SOX1O00570 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SOX1O00570 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SOX1O00570 Y_RNA.374-201ENST00000365606 101 ntBASIC2.4□□□□□ -2.03
SOX1O00570 RNU6-342P-201ENST00000384521 104 ntBASIC2.4□□□□□ -2.03
SOX1O00570 MIR520C-201ENST00000385005 87 ntBASIC2.4□□□□□ -2.03
SOX1O00570 RNA5SP450-201ENST00000411206 102 ntBASIC2.4□□□□□ -2.03
SOX1O00570 RNU6-826P-201ENST00000516827 104 ntBASIC2.4□□□□□ -2.03
SOX1O00570 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 216.7 ms