Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 MIR1-1-201ENST00000362147 71 ntBASIC0.65□□□□□ -2.31
NEDD8-MDP1E9PL57 Y_RNA.65-201ENST00000362846 100 ntBASIC0.65□□□□□ -2.31
NEDD8-MDP1E9PL57 RNU6-978P-201ENST00000364371 103 ntBASIC0.65□□□□□ -2.31
NEDD8-MDP1E9PL57 RNU6-934P-201ENST00000365154 107 ntBASIC0.65□□□□□ -2.31
NEDD8-MDP1E9PL57 Y_RNA.542-201ENST00000384641 111 ntBASIC0.65□□□□□ -2.31
NEDD8-MDP1E9PL57 SNORD38B-201ENST00000384690 67 ntBASIC0.65□□□□□ -2.31
NEDD8-MDP1E9PL57 RNU6-578P-201ENST00000390980 103 ntBASIC0.65□□□□□ -2.31
NEDD8-MDP1E9PL57 Y_RNA.626-201ENST00000411288 95 ntBASIC0.65□□□□□ -2.31
NEDD8-MDP1E9PL57 RPS26P5-201ENST00000418544 335 ntBASIC0.65□□□□□ -2.31
NEDD8-MDP1E9PL57 MTND3P2-201ENST00000438452 342 ntBASIC0.65□□□□□ -2.31
NEDD8-MDP1E9PL57 AL118496.2-201ENST00000448300 230 ntBASIC0.65□□□□□ -2.31
NEDD8-MDP1E9PL57 MIR4308-201ENST00000580634 81 ntBASIC0.65□□□□□ -2.31
NEDD8-MDP1E9PL57 MIR3129-201ENST00000581095 76 ntBASIC0.65□□□□□ -2.31
NEDD8-MDP1E9PL57 AL136317.1-201ENST00000612653 226 ntBASIC0.65□□□□□ -2.31
NEDD8-MDP1E9PL57 MIR6740-201ENST00000618268 113 ntBASIC0.65□□□□□ -2.31
NEDD8-MDP1E9PL57 U4.1-201ENST00000620349 87 ntBASIC0.65□□□□□ -2.31
NEDD8-MDP1E9PL57 SNORD38B-202ENST00000625943 69 ntBASIC0.65□□□□□ -2.31
NEDD8-MDP1E9PL57 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
NEDD8-MDP1E9PL57 RNU6-1292P-201ENST00000383856 107 ntBASIC0.64□□□□□ -2.31
NEDD8-MDP1E9PL57 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
NEDD8-MDP1E9PL57 SNORA26.6-201ENST00000391256 115 ntBASIC0.64□□□□□ -2.31
NEDD8-MDP1E9PL57 RNU6-493P-201ENST00000391321 108 ntBASIC0.64□□□□□ -2.31
NEDD8-MDP1E9PL57 Y_RNA.618-201ENST00000410949 107 ntBASIC0.64□□□□□ -2.31
NEDD8-MDP1E9PL57 SNORD83.1-201ENST00000411362 77 ntBASIC0.64□□□□□ -2.31
NEDD8-MDP1E9PL57 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
NEDD8-MDP1E9PL57 MIR5197-201ENST00000583721 112 ntBASIC0.64□□□□□ -2.31
NEDD8-MDP1E9PL57 AL365205.2-201ENST00000594586 68 ntBASIC0.64□□□□□ -2.31
NEDD8-MDP1E9PL57 Y_RNA.7-201ENST00000362352 102 ntBASIC0.63□□□□□ -2.31
NEDD8-MDP1E9PL57 Y_RNA.205-201ENST00000364128 113 ntBASIC0.63□□□□□ -2.31
NEDD8-MDP1E9PL57 Y_RNA.478-201ENST00000384358 107 ntBASIC0.63□□□□□ -2.31
NEDD8-MDP1E9PL57 SNORD105-201ENST00000386910 85 ntBASIC0.63□□□□□ -2.31
NEDD8-MDP1E9PL57 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.63□□□□□ -2.31
NEDD8-MDP1E9PL57 MIR548I3-201ENST00000408378 149 ntBASIC0.63□□□□□ -2.31
NEDD8-MDP1E9PL57 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.63□□□□□ -2.31
NEDD8-MDP1E9PL57 AC244098.3-201ENST00000424803 96 ntBASIC0.63□□□□□ -2.31
NEDD8-MDP1E9PL57 AL121914.1-201ENST00000450188 156 ntBASIC0.63□□□□□ -2.31
NEDD8-MDP1E9PL57 RNU7-62P-201ENST00000458856 62 ntBASIC0.63□□□□□ -2.31
NEDD8-MDP1E9PL57 AC020891.4-201ENST00000605745 93 ntBASIC0.63□□□□□ -2.31
NEDD8-MDP1E9PL57 RNU2-4P-201ENST00000606190 192 ntBASIC0.63□□□□□ -2.31
NEDD8-MDP1E9PL57 AC104465.1-201ENST00000611365 139 ntBASIC0.63□□□□□ -2.31
NEDD8-MDP1E9PL57 RNA5SP347-201ENST00000362445 119 ntBASIC0.62□□□□□ -2.31
NEDD8-MDP1E9PL57 Y_RNA.60-201ENST00000362831 98 ntBASIC0.62□□□□□ -2.31
NEDD8-MDP1E9PL57 Y_RNA.121-201ENST00000363309 113 ntBASIC0.62□□□□□ -2.31
NEDD8-MDP1E9PL57 Y_RNA.193-201ENST00000363979 102 ntBASIC0.62□□□□□ -2.31
NEDD8-MDP1E9PL57 SNORA1.1-201ENST00000364671 133 ntBASIC0.62□□□□□ -2.31
NEDD8-MDP1E9PL57 Y_RNA.351-201ENST00000365436 96 ntBASIC0.62□□□□□ -2.31
NEDD8-MDP1E9PL57 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
NEDD8-MDP1E9PL57 MIR563-201ENST00000385080 79 ntBASIC0.62□□□□□ -2.31
NEDD8-MDP1E9PL57 SNORA79-201ENST00000408376 140 ntBASIC0.62□□□□□ -2.31
NEDD8-MDP1E9PL57 AC015818.7-201ENST00000428754 109 ntBASIC0.62□□□□□ -2.31
NEDD8-MDP1E9PL57 AC087499.7-201ENST00000441958 109 ntBASIC0.62□□□□□ -2.31
NEDD8-MDP1E9PL57 RNU6-1023P-201ENST00000516137 106 ntBASIC0.62□□□□□ -2.31
NEDD8-MDP1E9PL57 MIR378D2-201ENST00000580636 98 ntBASIC0.62□□□□□ -2.31
NEDD8-MDP1E9PL57 AL353621.2-201ENST00000605340 133 ntBASIC0.62□□□□□ -2.31
NEDD8-MDP1E9PL57 MIR6717-201ENST00000622747 73 ntBASIC0.62□□□□□ -2.31
NEDD8-MDP1E9PL57 RNU6-923P-201ENST00000364753 107 ntBASIC0.61□□□□□ -2.31
NEDD8-MDP1E9PL57 Y_RNA.447-201ENST00000384184 113 ntBASIC0.61□□□□□ -2.31
NEDD8-MDP1E9PL57 RNU6-574P-201ENST00000384265 107 ntBASIC0.61□□□□□ -2.31
NEDD8-MDP1E9PL57 RNU6-110P-201ENST00000384508 104 ntBASIC0.61□□□□□ -2.31
NEDD8-MDP1E9PL57 MIR588-201ENST00000384900 83 ntBASIC0.61□□□□□ -2.31
NEDD8-MDP1E9PL57 SNORD12C-201ENST00000386307 89 ntBASIC0.61□□□□□ -2.31
NEDD8-MDP1E9PL57 snoU13.2-201ENST00000459201 104 ntBASIC0.61□□□□□ -2.31
NEDD8-MDP1E9PL57 RNU7-45P-201ENST00000459460 63 ntBASIC0.61□□□□□ -2.31
NEDD8-MDP1E9PL57 COX6CP6-201ENST00000490840 228 ntBASIC0.61□□□□□ -2.31
NEDD8-MDP1E9PL57 RNU6-111P-201ENST00000517179 105 ntBASIC0.61□□□□□ -2.31
NEDD8-MDP1E9PL57 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.61□□□□□ -2.31
NEDD8-MDP1E9PL57 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
NEDD8-MDP1E9PL57 MIR342-201ENST00000362212 99 ntBASIC0.6□□□□□ -2.31
NEDD8-MDP1E9PL57 Y_RNA.452-201ENST00000384202 108 ntBASIC0.6□□□□□ -2.31
NEDD8-MDP1E9PL57 Y_RNA.571-201ENST00000384753 98 ntBASIC0.6□□□□□ -2.31
NEDD8-MDP1E9PL57 MIR193B-201ENST00000384907 83 ntBASIC0.6□□□□□ -2.31
NEDD8-MDP1E9PL57 RNU1-119P-201ENST00000391122 165 ntBASIC0.6□□□□□ -2.31
NEDD8-MDP1E9PL57 MIR936-201ENST00000401264 98 ntBASIC0.6□□□□□ -2.31
NEDD8-MDP1E9PL57 RNU6-733P-201ENST00000410759 104 ntBASIC0.6□□□□□ -2.31
NEDD8-MDP1E9PL57 RNU4-71P-201ENST00000516258 113 ntBASIC0.6□□□□□ -2.31
NEDD8-MDP1E9PL57 SNORD116-25-201ENST00000516517 92 ntBASIC0.6□□□□□ -2.31
NEDD8-MDP1E9PL57 AC004817.2-201ENST00000561794 651 ntBASIC0.6□□□□□ -2.31
NEDD8-MDP1E9PL57 MIR4771-2-201ENST00000577758 74 ntBASIC0.6□□□□□ -2.31
NEDD8-MDP1E9PL57 MIR4804-201ENST00000581683 73 ntBASIC0.6□□□□□ -2.31
NEDD8-MDP1E9PL57 MIR4771-1-201ENST00000582617 74 ntBASIC0.6□□□□□ -2.31
NEDD8-MDP1E9PL57 MIR4676-201ENST00000583078 72 ntBASIC0.6□□□□□ -2.31
NEDD8-MDP1E9PL57 AC091932.4-201ENST00000623386 200 ntBASIC0.6□□□□□ -2.31
NEDD8-MDP1E9PL57 RNU6-702P-201ENST00000364982 107 ntBASIC0.59□□□□□ -2.31
NEDD8-MDP1E9PL57 Y_RNA.307-201ENST00000365022 117 ntBASIC0.59□□□□□ -2.31
NEDD8-MDP1E9PL57 RNU6-196P-201ENST00000384315 107 ntBASIC0.59□□□□□ -2.31
NEDD8-MDP1E9PL57 MIR18B-201ENST00000454574 71 ntBASIC0.59□□□□□ -2.31
NEDD8-MDP1E9PL57 RNU7-56P-201ENST00000458744 62 ntBASIC0.59□□□□□ -2.31
NEDD8-MDP1E9PL57 Y_RNA.797-201ENST00000515977 94 ntBASIC0.59□□□□□ -2.31
NEDD8-MDP1E9PL57 SCARNA15-202ENST00000516881 127 ntBASIC0.59□□□□□ -2.31
NEDD8-MDP1E9PL57 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.59□□□□□ -2.31
NEDD8-MDP1E9PL57 AC011195.1-201ENST00000578177 177 ntBASIC0.59□□□□□ -2.31
NEDD8-MDP1E9PL57 AC010332.2-201ENST00000613083 1904 ntBASIC0.58□□□□□ -2.32
NEDD8-MDP1E9PL57 MIR30D-201ENST00000362283 70 ntBASIC0.58□□□□□ -2.32
NEDD8-MDP1E9PL57 SNORD114-23-201ENST00000363536 72 ntBASIC0.58□□□□□ -2.32
NEDD8-MDP1E9PL57 RNA5SP499-201ENST00000363982 119 ntBASIC0.58□□□□□ -2.32
NEDD8-MDP1E9PL57 RNU6-275P-201ENST00000364910 107 ntBASIC0.58□□□□□ -2.32
NEDD8-MDP1E9PL57 RNU6-1319P-201ENST00000390855 104 ntBASIC0.58□□□□□ -2.32
NEDD8-MDP1E9PL57 RNU6-747P-201ENST00000390928 104 ntBASIC0.58□□□□□ -2.32
NEDD8-MDP1E9PL57 RNU6-241P-201ENST00000391148 104 ntBASIC0.58□□□□□ -2.32
NEDD8-MDP1E9PL57 RNU6-918P-201ENST00000391219 106 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms