Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 MIR1270-201ENST00000459320 83 ntBASIC2.62□□□□□ -1.99
USP17L3A6NCW0 RNA5SP393-201ENST00000363423 117 ntBASIC2.61□□□□□ -1.99
USP17L3A6NCW0 RNA5SP48-201ENST00000363969 126 ntBASIC2.61□□□□□ -1.99
USP17L3A6NCW0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
USP17L3A6NCW0 U8.13-201ENST00000390842 128 ntBASIC2.61□□□□□ -1.99
USP17L3A6NCW0 MIR1302-4-201ENST00000408701 150 ntBASIC2.61□□□□□ -1.99
USP17L3A6NCW0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.61□□□□□ -1.99
USP17L3A6NCW0 RNU6-1018P-201ENST00000516577 106 ntBASIC2.61□□□□□ -1.99
USP17L3A6NCW0 MIR4287-201ENST00000579398 78 ntBASIC2.61□□□□□ -1.99
USP17L3A6NCW0 MIR3670-2-201ENST00000582974 65 ntBASIC2.61□□□□□ -1.99
USP17L3A6NCW0 MIR3670-1-201ENST00000584160 65 ntBASIC2.61□□□□□ -1.99
USP17L3A6NCW0 MIR3670-3-201ENST00000584855 65 ntBASIC2.61□□□□□ -1.99
USP17L3A6NCW0 MIR3670-4-201ENST00000612260 65 ntBASIC2.61□□□□□ -1.99
USP17L3A6NCW0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
USP17L3A6NCW0 MIR8065-201ENST00000620577 100 ntBASIC2.61□□□□□ -1.99
USP17L3A6NCW0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.6□□□□□ -1.99
USP17L3A6NCW0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USP17L3A6NCW0 MIR6073-201ENST00000352083 89 ntBASIC2.6□□□□□ -1.99
USP17L3A6NCW0 MIR488-201ENST00000365739 83 ntBASIC2.6□□□□□ -1.99
USP17L3A6NCW0 RNU6-439P-201ENST00000384188 106 ntBASIC2.6□□□□□ -1.99
USP17L3A6NCW0 Y_RNA.558-201ENST00000384685 113 ntBASIC2.6□□□□□ -1.99
USP17L3A6NCW0 RNU6-679P-201ENST00000391003 106 ntBASIC2.6□□□□□ -1.99
USP17L3A6NCW0 RNU6-521P-201ENST00000516663 105 ntBASIC2.6□□□□□ -1.99
USP17L3A6NCW0 RNU6-295P-201ENST00000516901 104 ntBASIC2.6□□□□□ -1.99
USP17L3A6NCW0 MIR3935-201ENST00000583472 104 ntBASIC2.6□□□□□ -1.99
USP17L3A6NCW0 AL773524.1-201ENST00000614065 229 ntBASIC2.6□□□□□ -1.99
USP17L3A6NCW0 Y_RNA.377-201ENST00000365644 108 ntBASIC2.59□□□□□ -1.99
USP17L3A6NCW0 RNU6-49P-201ENST00000384256 107 ntBASIC2.59□□□□□ -1.99
USP17L3A6NCW0 Y_RNA.466-201ENST00000384294 113 ntBASIC2.59□□□□□ -1.99
USP17L3A6NCW0 RNA5SP181-201ENST00000410246 98 ntBASIC2.59□□□□□ -1.99
USP17L3A6NCW0 RNU6-602P-201ENST00000411155 105 ntBASIC2.59□□□□□ -1.99
USP17L3A6NCW0 MIR548AO-201ENST00000579992 96 ntBASIC2.59□□□□□ -1.99
USP17L3A6NCW0 AL357312.1-201ENST00000603879 298 ntBASIC2.59□□□□□ -1.99
USP17L3A6NCW0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
USP17L3A6NCW0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
USP17L3A6NCW0 SNORA16B-201ENST00000364674 135 ntBASIC2.58□□□□□ -2
USP17L3A6NCW0 SNORA18-201ENST00000384416 132 ntBASIC2.58□□□□□ -2
USP17L3A6NCW0 RNU6-342P-201ENST00000384521 104 ntBASIC2.58□□□□□ -2
USP17L3A6NCW0 SNORA48.3-201ENST00000391081 134 ntBASIC2.58□□□□□ -2
USP17L3A6NCW0 SNORA26.9-201ENST00000391322 122 ntBASIC2.58□□□□□ -2
USP17L3A6NCW0 AL353813.1-201ENST00000440700 253 ntBASIC2.58□□□□□ -2
USP17L3A6NCW0 RNU7-41P-201ENST00000515917 61 ntBASIC2.58□□□□□ -2
USP17L3A6NCW0 RNA5SP458-201ENST00000516188 119 ntBASIC2.58□□□□□ -2
USP17L3A6NCW0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.58□□□□□ -2
USP17L3A6NCW0 AC022254.1-201ENST00000567857 235 ntBASIC2.58□□□□□ -2
USP17L3A6NCW0 MALAT1.1-201ENST00000618249 95 ntBASIC2.58□□□□□ -2
USP17L3A6NCW0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.58□□□□□ -2
USP17L3A6NCW0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
USP17L3A6NCW0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
USP17L3A6NCW0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
USP17L3A6NCW0 HMGN2P35-201ENST00000412164 270 ntBASIC2.57□□□□□ -2
USP17L3A6NCW0 RNU6-826P-201ENST00000516827 104 ntBASIC2.57□□□□□ -2
USP17L3A6NCW0 RNU7-35P-201ENST00000517174 62 ntBASIC2.57□□□□□ -2
USP17L3A6NCW0 MIR4713-201ENST00000582691 75 ntBASIC2.57□□□□□ -2
USP17L3A6NCW0 AL512310.12-203ENST00000640543 90 ntBASIC2.57□□□□□ -2
USP17L3A6NCW0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
USP17L3A6NCW0 SNORD45B-201ENST00000364617 72 ntBASIC2.56□□□□□ -2
USP17L3A6NCW0 RNU6-1201P-201ENST00000384227 107 ntBASIC2.56□□□□□ -2
USP17L3A6NCW0 SNORD38B-201ENST00000384690 67 ntBASIC2.56□□□□□ -2
USP17L3A6NCW0 RNU7-2P-201ENST00000516096 62 ntBASIC2.56□□□□□ -2
USP17L3A6NCW0 RNU6-922P-201ENST00000516753 99 ntBASIC2.56□□□□□ -2
USP17L3A6NCW0 AC096720.1-201ENST00000604441 183 ntBASIC2.56□□□□□ -2
USP17L3A6NCW0 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.56□□□□□ -2
USP17L3A6NCW0 SNORD38B-202ENST00000625943 69 ntBASIC2.56□□□□□ -2
USP17L3A6NCW0 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.56□□□□□ -2
USP17L3A6NCW0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
USP17L3A6NCW0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
USP17L3A6NCW0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
USP17L3A6NCW0 ZNF355P-201ENST00000427301 3216 ntBASIC2.55□□□□□ -2
USP17L3A6NCW0 RNU6-1313P-201ENST00000362622 102 ntBASIC2.55□□□□□ -2
USP17L3A6NCW0 Y_RNA.96-201ENST00000363092 109 ntBASIC2.55□□□□□ -2
USP17L3A6NCW0 SNORD115-35-201ENST00000365122 82 ntBASIC2.55□□□□□ -2
USP17L3A6NCW0 SNORD41-201ENST00000386967 70 ntBASIC2.55□□□□□ -2
USP17L3A6NCW0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.55□□□□□ -2
USP17L3A6NCW0 AC096949.1-201ENST00000412047 152 ntBASIC2.55□□□□□ -2
USP17L3A6NCW0 AC004941.2-201ENST00000427009 228 ntBASIC2.55□□□□□ -2
USP17L3A6NCW0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.55□□□□□ -2
USP17L3A6NCW0 AL137847.3-201ENST00000611521 109 ntBASIC2.55□□□□□ -2
USP17L3A6NCW0 AC010297.1-201ENST00000623948 149 ntBASIC2.55□□□□□ -2
USP17L3A6NCW0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
USP17L3A6NCW0 RNU6-170P-201ENST00000362832 104 ntBASIC2.54□□□□□ -2
USP17L3A6NCW0 Y_RNA.342-201ENST00000365352 113 ntBASIC2.54□□□□□ -2
USP17L3A6NCW0 AC009474.2-201ENST00000451383 136 ntBASIC2.54□□□□□ -2
USP17L3A6NCW0 AC015688.6-201ENST00000577737 104 ntBASIC2.54□□□□□ -2
USP17L3A6NCW0 MIR8074-201ENST00000615081 81 ntBASIC2.54□□□□□ -2
USP17L3A6NCW0 AL442128.1-201ENST00000615151 90 ntBASIC2.54□□□□□ -2
USP17L3A6NCW0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.53□□□□□ -2
USP17L3A6NCW0 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.53□□□□□ -2
USP17L3A6NCW0 AC108729.3-201ENST00000513484 108 ntBASIC2.53□□□□□ -2
USP17L3A6NCW0 Y_RNA.659-201ENST00000515994 113 ntBASIC2.53□□□□□ -2
USP17L3A6NCW0 MIR6845-201ENST00000613182 61 ntBASIC2.53□□□□□ -2
USP17L3A6NCW0 Z82195.2-201ENST00000612348 18351 ntBASIC2.53□□□□□ -2
USP17L3A6NCW0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USP17L3A6NCW0 MIR206-201ENST00000384872 86 ntBASIC2.52□□□□□ -2.01
USP17L3A6NCW0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.52□□□□□ -2.01
USP17L3A6NCW0 RNU6-1086P-201ENST00000410930 100 ntBASIC2.52□□□□□ -2.01
USP17L3A6NCW0 RNU6-795P-201ENST00000516323 103 ntBASIC2.52□□□□□ -2.01
USP17L3A6NCW0 RNU6-844P-201ENST00000517175 102 ntBASIC2.52□□□□□ -2.01
USP17L3A6NCW0 SNORD73B-201ENST00000364394 72 ntBASIC2.51□□□□□ -2.01
USP17L3A6NCW0 RNY1P7-201ENST00000384743 110 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms