Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
SMARCAL1Q9NZC9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SMARCAL1Q9NZC9 SNORD33-201ENST00000362761 85 ntBASIC1.29□□□□□ -2.2
SMARCAL1Q9NZC9 SNORA7.1-201ENST00000363750 139 ntBASIC1.29□□□□□ -2.2
SMARCAL1Q9NZC9 Y_RNA.351-201ENST00000365436 96 ntBASIC1.29□□□□□ -2.2
SMARCAL1Q9NZC9 RNU6-1065P-201ENST00000384513 106 ntBASIC1.29□□□□□ -2.2
SMARCAL1Q9NZC9 AC107297.1-201ENST00000459991 176 ntBASIC1.29□□□□□ -2.2
SMARCAL1Q9NZC9 RNA5SP445-201ENST00000515889 115 ntBASIC1.29□□□□□ -2.2
SMARCAL1Q9NZC9 RNU2-13P-201ENST00000515909 113 ntBASIC1.29□□□□□ -2.2
SMARCAL1Q9NZC9 RNU7-43P-201ENST00000516554 64 ntBASIC1.29□□□□□ -2.2
SMARCAL1Q9NZC9 RNU6-958P-201ENST00000516995 106 ntBASIC1.29□□□□□ -2.2
SMARCAL1Q9NZC9 RNU6-902P-201ENST00000517212 91 ntBASIC1.29□□□□□ -2.2
SMARCAL1Q9NZC9 RNU2-60P-201ENST00000517290 128 ntBASIC1.29□□□□□ -2.2
SMARCAL1Q9NZC9 AL512310.8-201ENST00000550183 120 ntBASIC1.29□□□□□ -2.2
SMARCAL1Q9NZC9 MIR3664-201ENST00000579074 99 ntBASIC1.29□□□□□ -2.2
SMARCAL1Q9NZC9 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.29□□□□□ -2.2
SMARCAL1Q9NZC9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
SMARCAL1Q9NZC9 AP1B1P2-201ENST00000416196 106 ntBASIC1.28□□□□□ -2.2
SMARCAL1Q9NZC9 snoU13.25-201ENST00000458945 104 ntBASIC1.28□□□□□ -2.2
SMARCAL1Q9NZC9 RNU7-67P-201ENST00000459003 62 ntBASIC1.28□□□□□ -2.2
SMARCAL1Q9NZC9 RPS29P24-201ENST00000486345 171 ntBASIC1.28□□□□□ -2.2
SMARCAL1Q9NZC9 Y_RNA.686-201ENST00000516548 134 ntBASIC1.28□□□□□ -2.2
SMARCAL1Q9NZC9 RNU6-165P-201ENST00000517170 99 ntBASIC1.28□□□□□ -2.2
SMARCAL1Q9NZC9 AL359821.1-201ENST00000605519 182 ntBASIC1.28□□□□□ -2.2
SMARCAL1Q9NZC9 AC243994.1-201ENST00000618627 109 ntBASIC1.28□□□□□ -2.2
SMARCAL1Q9NZC9 AC008133.2-201ENST00000624540 351 ntBASIC1.28□□□□□ -2.2
SMARCAL1Q9NZC9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
SMARCAL1Q9NZC9 Y_RNA.420-201ENST00000384043 110 ntBASIC1.27□□□□□ -2.21
SMARCAL1Q9NZC9 Y_RNA.537-201ENST00000384626 109 ntBASIC1.27□□□□□ -2.21
SMARCAL1Q9NZC9 SNORA40.6-201ENST00000391153 128 ntBASIC1.27□□□□□ -2.21
SMARCAL1Q9NZC9 MIR3660-201ENST00000584845 100 ntBASIC1.27□□□□□ -2.21
SMARCAL1Q9NZC9 AL357312.1-201ENST00000603879 298 ntBASIC1.27□□□□□ -2.21
SMARCAL1Q9NZC9 AL596211.1-201ENST00000569873 2277 ntBASIC1.27□□□□□ -2.21
SMARCAL1Q9NZC9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.26□□□□□ -2.21
SMARCAL1Q9NZC9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SMARCAL1Q9NZC9 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.26□□□□□ -2.21
SMARCAL1Q9NZC9 SNORA25.3-201ENST00000363205 127 ntBASIC1.26□□□□□ -2.21
SMARCAL1Q9NZC9 Y_RNA.226-201ENST00000364337 114 ntBASIC1.26□□□□□ -2.21
SMARCAL1Q9NZC9 RNU6-309P-201ENST00000364573 106 ntBASIC1.26□□□□□ -2.21
SMARCAL1Q9NZC9 RNU6-915P-201ENST00000364943 103 ntBASIC1.26□□□□□ -2.21
SMARCAL1Q9NZC9 SNORA51.10-201ENST00000384418 136 ntBASIC1.26□□□□□ -2.21
SMARCAL1Q9NZC9 RNU6-1067P-201ENST00000384752 107 ntBASIC1.26□□□□□ -2.21
SMARCAL1Q9NZC9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
SMARCAL1Q9NZC9 AL603908.1-201ENST00000406098 201 ntBASIC1.26□□□□□ -2.21
SMARCAL1Q9NZC9 MIR1285-1-201ENST00000408593 84 ntBASIC1.26□□□□□ -2.21
SMARCAL1Q9NZC9 RNU6-321P-201ENST00000410912 106 ntBASIC1.26□□□□□ -2.21
SMARCAL1Q9NZC9 RNU2-11P-201ENST00000459191 187 ntBASIC1.26□□□□□ -2.21
SMARCAL1Q9NZC9 RNU6-998P-201ENST00000515894 101 ntBASIC1.26□□□□□ -2.21
SMARCAL1Q9NZC9 SNORA31.4-201ENST00000516049 129 ntBASIC1.26□□□□□ -2.21
SMARCAL1Q9NZC9 RNA5SP236-201ENST00000516169 116 ntBASIC1.26□□□□□ -2.21
SMARCAL1Q9NZC9 AL121890.5-201ENST00000620848 304 ntBASIC1.26□□□□□ -2.21
SMARCAL1Q9NZC9 AC091932.4-201ENST00000623386 200 ntBASIC1.26□□□□□ -2.21
SMARCAL1Q9NZC9 Y_RNA.343-201ENST00000365354 112 ntBASIC1.25□□□□□ -2.21
SMARCAL1Q9NZC9 Y_RNA.568-201ENST00000384742 113 ntBASIC1.25□□□□□ -2.21
SMARCAL1Q9NZC9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.25□□□□□ -2.21
SMARCAL1Q9NZC9 AL035398.1-201ENST00000430869 322 ntBASIC1.25□□□□□ -2.21
SMARCAL1Q9NZC9 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.25□□□□□ -2.21
SMARCAL1Q9NZC9 RPL30P7-201ENST00000479312 323 ntBASIC1.25□□□□□ -2.21
SMARCAL1Q9NZC9 TRMT112P2-201ENST00000512910 132 ntBASIC1.25□□□□□ -2.21
SMARCAL1Q9NZC9 RN7SKP179-201ENST00000516126 217 ntBASIC1.25□□□□□ -2.21
SMARCAL1Q9NZC9 CYP3A52P-201ENST00000563326 91 ntBASIC1.25□□□□□ -2.21
SMARCAL1Q9NZC9 HSPE1P19-201ENST00000603327 295 ntBASIC1.25□□□□□ -2.21
SMARCAL1Q9NZC9 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
SMARCAL1Q9NZC9 AL157834.3-201ENST00000615543 103 ntBASIC1.25□□□□□ -2.21
SMARCAL1Q9NZC9 MIR4251-201ENST00000635819 61 ntBASIC1.25□□□□□ -2.21
SMARCAL1Q9NZC9 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
SMARCAL1Q9NZC9 AC010332.2-201ENST00000613083 1904 ntBASIC1.25□□□□□ -2.21
SMARCAL1Q9NZC9 SNORD18B-201ENST00000365659 72 ntBASIC1.24□□□□□ -2.21
SMARCAL1Q9NZC9 SNORA24-201ENST00000384096 131 ntBASIC1.24□□□□□ -2.21
SMARCAL1Q9NZC9 RNU6-913P-201ENST00000390913 95 ntBASIC1.24□□□□□ -2.21
SMARCAL1Q9NZC9 MIR1287-201ENST00000408492 90 ntBASIC1.24□□□□□ -2.21
SMARCAL1Q9NZC9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.24□□□□□ -2.21
SMARCAL1Q9NZC9 RPL39P39-201ENST00000455840 151 ntBASIC1.24□□□□□ -2.21
SMARCAL1Q9NZC9 RNU7-45P-201ENST00000459460 63 ntBASIC1.24□□□□□ -2.21
SMARCAL1Q9NZC9 RNU7-96P-201ENST00000459535 64 ntBASIC1.24□□□□□ -2.21
SMARCAL1Q9NZC9 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.24□□□□□ -2.21
SMARCAL1Q9NZC9 RNU5E-3P-201ENST00000515913 68 ntBASIC1.24□□□□□ -2.21
SMARCAL1Q9NZC9 Y_RNA.690-201ENST00000516603 95 ntBASIC1.24□□□□□ -2.21
SMARCAL1Q9NZC9 RN7SKP88-201ENST00000516847 250 ntBASIC1.24□□□□□ -2.21
SMARCAL1Q9NZC9 RNU7-70P-201ENST00000516941 66 ntBASIC1.24□□□□□ -2.21
SMARCAL1Q9NZC9 MIR548AO-201ENST00000579992 96 ntBASIC1.24□□□□□ -2.21
SMARCAL1Q9NZC9 7SK.8-201ENST00000612110 250 ntBASIC1.24□□□□□ -2.21
SMARCAL1Q9NZC9 7SK.11-201ENST00000615477 250 ntBASIC1.24□□□□□ -2.21
SMARCAL1Q9NZC9 AL353770.2-201ENST00000620024 78 ntBASIC1.24□□□□□ -2.21
SMARCAL1Q9NZC9 7SK.13-201ENST00000622040 250 ntBASIC1.24□□□□□ -2.21
SMARCAL1Q9NZC9 MIR302B-201ENST00000362188 73 ntBASIC1.23□□□□□ -2.21
SMARCAL1Q9NZC9 Y_RNA.120-201ENST00000363304 110 ntBASIC1.23□□□□□ -2.21
SMARCAL1Q9NZC9 RNU1-133P-201ENST00000364867 167 ntBASIC1.23□□□□□ -2.21
SMARCAL1Q9NZC9 Y_RNA.294-201ENST00000364916 102 ntBASIC1.23□□□□□ -2.21
SMARCAL1Q9NZC9 RNU6-939P-201ENST00000384634 107 ntBASIC1.23□□□□□ -2.21
SMARCAL1Q9NZC9 RNU6-257P-201ENST00000410238 98 ntBASIC1.23□□□□□ -2.21
SMARCAL1Q9NZC9 RNU6-1190P-201ENST00000410811 104 ntBASIC1.23□□□□□ -2.21
SMARCAL1Q9NZC9 MTND4LP9-201ENST00000427694 174 ntBASIC1.23□□□□□ -2.21
SMARCAL1Q9NZC9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.23□□□□□ -2.21
SMARCAL1Q9NZC9 RNU7-80P-201ENST00000459562 61 ntBASIC1.23□□□□□ -2.21
SMARCAL1Q9NZC9 AP001328.1-201ENST00000528550 176 ntBASIC1.23□□□□□ -2.21
SMARCAL1Q9NZC9 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.23□□□□□ -2.21
SMARCAL1Q9NZC9 SNORA70.7-201ENST00000384159 133 ntBASIC1.22□□□□□ -2.21
SMARCAL1Q9NZC9 HMGN1P33-201ENST00000432945 451 ntBASIC1.22□□□□□ -2.21
SMARCAL1Q9NZC9 Y_RNA.651-201ENST00000459380 103 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 201.7 ms