Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 Y_RNA.294-201ENST00000364916 102 ntBASIC1.36□□□□□ -2.19
DDX43Q9NXZ2 Y_RNA.410-201ENST00000383992 113 ntBASIC1.36□□□□□ -2.19
DDX43Q9NXZ2 RNU6-22P-201ENST00000384355 107 ntBASIC1.36□□□□□ -2.19
DDX43Q9NXZ2 MIR758-201ENST00000390227 88 ntBASIC1.36□□□□□ -2.19
DDX43Q9NXZ2 AL603914.1-201ENST00000401964 204 ntBASIC1.36□□□□□ -2.19
DDX43Q9NXZ2 SNORA18.4-201ENST00000516440 124 ntBASIC1.36□□□□□ -2.19
DDX43Q9NXZ2 AC068338.1-201ENST00000565567 176 ntBASIC1.36□□□□□ -2.19
DDX43Q9NXZ2 MIR3664-201ENST00000579074 99 ntBASIC1.36□□□□□ -2.19
DDX43Q9NXZ2 U7.2-201ENST00000607576 63 ntBASIC1.36□□□□□ -2.19
DDX43Q9NXZ2 AL365222.1-201ENST00000614661 98 ntBASIC1.36□□□□□ -2.19
DDX43Q9NXZ2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
DDX43Q9NXZ2 Y_RNA.71-201ENST00000362892 104 ntBASIC1.35□□□□□ -2.19
DDX43Q9NXZ2 RNU6-309P-201ENST00000364573 106 ntBASIC1.35□□□□□ -2.19
DDX43Q9NXZ2 Y_RNA.494-201ENST00000384432 111 ntBASIC1.35□□□□□ -2.19
DDX43Q9NXZ2 RNU6-1117P-201ENST00000384525 104 ntBASIC1.35□□□□□ -2.19
DDX43Q9NXZ2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
DDX43Q9NXZ2 RNU6-1149P-201ENST00000516810 97 ntBASIC1.35□□□□□ -2.19
DDX43Q9NXZ2 RNU6-1234P-201ENST00000516877 103 ntBASIC1.35□□□□□ -2.19
DDX43Q9NXZ2 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.35□□□□□ -2.19
DDX43Q9NXZ2 MIR4778-201ENST00000577635 80 ntBASIC1.35□□□□□ -2.19
DDX43Q9NXZ2 TUG1_4.1-201ENST00000619464 181 ntBASIC1.35□□□□□ -2.19
DDX43Q9NXZ2 AC015726.2-201ENST00000620112 122 ntBASIC1.35□□□□□ -2.19
DDX43Q9NXZ2 MIR8065-201ENST00000620577 100 ntBASIC1.35□□□□□ -2.19
DDX43Q9NXZ2 SNORD3E-202ENST00000627253 216 ntBASIC1.35□□□□□ -2.19
DDX43Q9NXZ2 Y_RNA.440-201ENST00000384120 114 ntBASIC1.34□□□□□ -2.19
DDX43Q9NXZ2 MIR802-201ENST00000390235 94 ntBASIC1.34□□□□□ -2.19
DDX43Q9NXZ2 RNU6-1168P-201ENST00000390831 104 ntBASIC1.34□□□□□ -2.19
DDX43Q9NXZ2 RPS29P29-201ENST00000456396 171 ntBASIC1.34□□□□□ -2.19
DDX43Q9NXZ2 SNORA31.4-201ENST00000516049 129 ntBASIC1.34□□□□□ -2.19
DDX43Q9NXZ2 RNU6-479P-201ENST00000516348 105 ntBASIC1.34□□□□□ -2.19
DDX43Q9NXZ2 RN7SKP88-201ENST00000516847 250 ntBASIC1.34□□□□□ -2.19
DDX43Q9NXZ2 AC019288.1-201ENST00000557918 224 ntBASIC1.34□□□□□ -2.19
DDX43Q9NXZ2 MIR6078-201ENST00000611069 100 ntBASIC1.34□□□□□ -2.19
DDX43Q9NXZ2 7SK.8-201ENST00000612110 250 ntBASIC1.34□□□□□ -2.19
DDX43Q9NXZ2 7SK.11-201ENST00000615477 250 ntBASIC1.34□□□□□ -2.19
DDX43Q9NXZ2 7SK.13-201ENST00000622040 250 ntBASIC1.34□□□□□ -2.19
DDX43Q9NXZ2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
DDX43Q9NXZ2 Y_RNA.291-201ENST00000364886 113 ntBASIC1.33□□□□□ -2.2
DDX43Q9NXZ2 MIR539-201ENST00000365690 78 ntBASIC1.33□□□□□ -2.2
DDX43Q9NXZ2 SNORD116-14-201ENST00000383894 92 ntBASIC1.33□□□□□ -2.2
DDX43Q9NXZ2 SNORD116-17-201ENST00000383929 92 ntBASIC1.33□□□□□ -2.2
DDX43Q9NXZ2 RNU6-1189P-201ENST00000383958 107 ntBASIC1.33□□□□□ -2.2
DDX43Q9NXZ2 SNORD38C-201ENST00000384381 69 ntBASIC1.33□□□□□ -2.2
DDX43Q9NXZ2 SNORD116-15-201ENST00000384445 92 ntBASIC1.33□□□□□ -2.2
DDX43Q9NXZ2 SNORD116-19-201ENST00000384729 92 ntBASIC1.33□□□□□ -2.2
DDX43Q9NXZ2 MIR452-201ENST00000385020 85 ntBASIC1.33□□□□□ -2.2
DDX43Q9NXZ2 MIR516B2-201ENST00000385190 85 ntBASIC1.33□□□□□ -2.2
DDX43Q9NXZ2 AC087499.4-201ENST00000448505 178 ntBASIC1.33□□□□□ -2.2
DDX43Q9NXZ2 RNU6-1211P-201ENST00000459179 105 ntBASIC1.33□□□□□ -2.2
DDX43Q9NXZ2 RNU6-917P-201ENST00000516294 104 ntBASIC1.33□□□□□ -2.2
DDX43Q9NXZ2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
DDX43Q9NXZ2 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.32□□□□□ -2.2
DDX43Q9NXZ2 Y_RNA.127-201ENST00000363386 109 ntBASIC1.32□□□□□ -2.2
DDX43Q9NXZ2 Y_RNA.261-201ENST00000364631 102 ntBASIC1.32□□□□□ -2.2
DDX43Q9NXZ2 RNU6-80P-201ENST00000384195 107 ntBASIC1.32□□□□□ -2.2
DDX43Q9NXZ2 Y_RNA.525-201ENST00000384570 113 ntBASIC1.32□□□□□ -2.2
DDX43Q9NXZ2 SNORA22C-201ENST00000384614 134 ntBASIC1.32□□□□□ -2.2
DDX43Q9NXZ2 RPS26P48-201ENST00000491713 339 ntBASIC1.32□□□□□ -2.2
DDX43Q9NXZ2 RNU2-13P-201ENST00000515909 113 ntBASIC1.32□□□□□ -2.2
DDX43Q9NXZ2 RNU6-659P-201ENST00000516454 104 ntBASIC1.32□□□□□ -2.2
DDX43Q9NXZ2 Y_RNA.690-201ENST00000516603 95 ntBASIC1.32□□□□□ -2.2
DDX43Q9NXZ2 AP003484.1-201ENST00000530974 250 ntBASIC1.32□□□□□ -2.2
DDX43Q9NXZ2 Y_RNA.114-201ENST00000363265 113 ntBASIC1.31□□□□□ -2.2
DDX43Q9NXZ2 Y_RNA.118-201ENST00000363300 101 ntBASIC1.31□□□□□ -2.2
DDX43Q9NXZ2 SNORA25.8-201ENST00000364831 128 ntBASIC1.31□□□□□ -2.2
DDX43Q9NXZ2 RNU6-53P-201ENST00000365367 106 ntBASIC1.31□□□□□ -2.2
DDX43Q9NXZ2 MIR653-201ENST00000385279 96 ntBASIC1.31□□□□□ -2.2
DDX43Q9NXZ2 U8.17-201ENST00000391292 132 ntBASIC1.31□□□□□ -2.2
DDX43Q9NXZ2 RNU2-51P-201ENST00000410708 197 ntBASIC1.31□□□□□ -2.2
DDX43Q9NXZ2 Y_RNA.617-201ENST00000410920 90 ntBASIC1.31□□□□□ -2.2
DDX43Q9NXZ2 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.31□□□□□ -2.2
DDX43Q9NXZ2 AL158147.1-201ENST00000443970 75 ntBASIC1.31□□□□□ -2.2
DDX43Q9NXZ2 Y_RNA.692-201ENST00000516627 105 ntBASIC1.31□□□□□ -2.2
DDX43Q9NXZ2 RNU7-181P-201ENST00000517234 74 ntBASIC1.31□□□□□ -2.2
DDX43Q9NXZ2 IGKV1-22-201ENST00000524313 326 ntBASIC1.31□□□□□ -2.2
DDX43Q9NXZ2 AC108081.1-201ENST00000604358 221 ntBASIC1.31□□□□□ -2.2
DDX43Q9NXZ2 AL022345.2-201ENST00000606307 135 ntBASIC1.31□□□□□ -2.2
DDX43Q9NXZ2 AC011603.4-201ENST00000611325 277 ntBASIC1.31□□□□□ -2.2
DDX43Q9NXZ2 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 SNORD115-34-201ENST00000362441 82 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 RNA5SP327-201ENST00000362494 101 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 SNORD115-12-201ENST00000362583 82 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 SNORD115-29-201ENST00000362834 82 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 SNORD115-9-201ENST00000362912 82 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 SNORD115-21-201ENST00000362963 81 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 SNORD115-14-201ENST00000363090 81 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 SNORD115-13-201ENST00000363358 82 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 SNORD115-41-201ENST00000363608 82 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 SNORD115-11-201ENST00000363616 82 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 SNORD115-5-201ENST00000363633 82 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 SNORD115-39-201ENST00000363694 82 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 SNORD115-4-201ENST00000363810 82 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 SNORD115-16-201ENST00000363887 82 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 SNORD115-6-201ENST00000363942 82 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 SNORD115-42-201ENST00000364273 82 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 RNA5SP205-201ENST00000364653 136 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 SNORD115-15-201ENST00000364809 81 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 SNORD115-1-201ENST00000364961 82 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 SNORD115-26-201ENST00000365067 82 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 SNORD115-10-201ENST00000365073 81 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 225.3 ms