Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 RNU6-514P-201ENST00000384208 107 ntBASIC-0.05□□□□□ -2.42
SHANK3Q9BYB0 MIR635-201ENST00000384830 98 ntBASIC-0.05□□□□□ -2.42
SHANK3Q9BYB0 RNU4-30P-201ENST00000410245 143 ntBASIC-0.05□□□□□ -2.42
SHANK3Q9BYB0 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.05□□□□□ -2.42
SHANK3Q9BYB0 MIR4290-201ENST00000583807 95 ntBASIC-0.05□□□□□ -2.42
SHANK3Q9BYB0 MIR6755-201ENST00000619993 66 ntBASIC-0.05□□□□□ -2.42
SHANK3Q9BYB0 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.05□□□□□ -2.42
SHANK3Q9BYB0 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.06□□□□□ -2.42
SHANK3Q9BYB0 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.06□□□□□ -2.42
SHANK3Q9BYB0 RNU6-46P-201ENST00000383860 107 ntBASIC-0.06□□□□□ -2.42
SHANK3Q9BYB0 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.06□□□□□ -2.42
SHANK3Q9BYB0 RNY3P5-201ENST00000384127 102 ntBASIC-0.06□□□□□ -2.42
SHANK3Q9BYB0 SNORA26.5-201ENST00000391215 123 ntBASIC-0.06□□□□□ -2.42
SHANK3Q9BYB0 SNORD93-201ENST00000408813 74 ntBASIC-0.06□□□□□ -2.42
SHANK3Q9BYB0 RNA5SP451-201ENST00000410588 110 ntBASIC-0.06□□□□□ -2.42
SHANK3Q9BYB0 MTND1P14-201ENST00000427400 950 ntBASIC-0.06□□□□□ -2.42
SHANK3Q9BYB0 AL589823.1-201ENST00000429577 183 ntBASIC-0.06□□□□□ -2.42
SHANK3Q9BYB0 AC098614.3-201ENST00000438957 440 ntBASIC-0.06□□□□□ -2.42
SHANK3Q9BYB0 AP003733.2-201ENST00000529409 171 ntBASIC-0.06□□□□□ -2.42
SHANK3Q9BYB0 AC104408.1-201ENST00000605241 170 ntBASIC-0.06□□□□□ -2.42
SHANK3Q9BYB0 AL021707.8-201ENST00000609428 183 ntBASIC-0.06□□□□□ -2.42
SHANK3Q9BYB0 AC007485.1-201ENST00000616755 206 ntBASIC-0.06□□□□□ -2.42
SHANK3Q9BYB0 MIR302B-201ENST00000362188 73 ntBASIC-0.07□□□□□ -2.42
SHANK3Q9BYB0 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.07□□□□□ -2.42
SHANK3Q9BYB0 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.07□□□□□ -2.42
SHANK3Q9BYB0 RNU1-115P-201ENST00000365329 160 ntBASIC-0.07□□□□□ -2.42
SHANK3Q9BYB0 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.07□□□□□ -2.42
SHANK3Q9BYB0 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.07□□□□□ -2.42
SHANK3Q9BYB0 RNY4P36-201ENST00000391116 96 ntBASIC-0.07□□□□□ -2.42
SHANK3Q9BYB0 SNORD77.4-201ENST00000516158 81 ntBASIC-0.07□□□□□ -2.42
SHANK3Q9BYB0 SNORD116.3-201ENST00000517176 78 ntBASIC-0.07□□□□□ -2.42
SHANK3Q9BYB0 AC092447.9-201ENST00000603395 144 ntBASIC-0.07□□□□□ -2.42
SHANK3Q9BYB0 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.07□□□□□ -2.42
SHANK3Q9BYB0 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.07□□□□□ -2.42
SHANK3Q9BYB0 AC122108.2-201ENST00000611946 526 ntBASIC-0.07□□□□□ -2.42
SHANK3Q9BYB0 AC010332.2-201ENST00000613083 1904 ntBASIC-0.07□□□□□ -2.42
SHANK3Q9BYB0 RNU4-90P-201ENST00000362773 141 ntBASIC-0.07□□□□□ -2.42
SHANK3Q9BYB0 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.07□□□□□ -2.42
SHANK3Q9BYB0 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.07□□□□□ -2.42
SHANK3Q9BYB0 RNU4-40P-201ENST00000364351 143 ntBASIC-0.07□□□□□ -2.42
SHANK3Q9BYB0 SNORA63.7-201ENST00000365579 123 ntBASIC-0.07□□□□□ -2.42
SHANK3Q9BYB0 RNU6V-201ENST00000384105 107 ntBASIC-0.07□□□□□ -2.42
SHANK3Q9BYB0 MIR588-201ENST00000384900 83 ntBASIC-0.07□□□□□ -2.42
SHANK3Q9BYB0 RNU6-998P-201ENST00000515894 101 ntBASIC-0.07□□□□□ -2.42
SHANK3Q9BYB0 SNORD58B-201ENST00000607313 66 ntBASIC-0.07□□□□□ -2.42
SHANK3Q9BYB0 AC084781.2-201ENST00000615568 161 ntBASIC-0.07□□□□□ -2.42
SHANK3Q9BYB0 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.08□□□□□ -2.42
SHANK3Q9BYB0 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.08□□□□□ -2.42
SHANK3Q9BYB0 RNU6-937P-201ENST00000384325 106 ntBASIC-0.08□□□□□ -2.42
SHANK3Q9BYB0 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.08□□□□□ -2.42
SHANK3Q9BYB0 RNU6-383P-201ENST00000410864 94 ntBASIC-0.08□□□□□ -2.42
SHANK3Q9BYB0 BTF3P11-201ENST00000426582 477 ntBASIC-0.08□□□□□ -2.42
SHANK3Q9BYB0 MTCO2P24-201ENST00000515611 426 ntBASIC-0.08□□□□□ -2.42
SHANK3Q9BYB0 SNORA20.3-201ENST00000516880 132 ntBASIC-0.08□□□□□ -2.42
SHANK3Q9BYB0 AC131281.1-201ENST00000522984 164 ntBASIC-0.08□□□□□ -2.42
SHANK3Q9BYB0 DEFB117-201ENST00000602356 141 ntBASIC-0.08□□□□□ -2.42
SHANK3Q9BYB0 C8orf59P2-201ENST00000603441 271 ntBASIC-0.08□□□□□ -2.42
SHANK3Q9BYB0 AC090971.5-201ENST00000621102 293 ntBASIC-0.08□□□□□ -2.42
SHANK3Q9BYB0 SNORA36.1-201ENST00000363424 132 ntBASIC-0.09□□□□□ -2.42
SHANK3Q9BYB0 RNU6-302P-201ENST00000365249 107 ntBASIC-0.09□□□□□ -2.42
SHANK3Q9BYB0 MIR548A2-201ENST00000384956 97 ntBASIC-0.09□□□□□ -2.42
SHANK3Q9BYB0 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
SHANK3Q9BYB0 RNU6-913P-201ENST00000390913 95 ntBASIC-0.09□□□□□ -2.42
SHANK3Q9BYB0 RNU6-308P-201ENST00000390957 107 ntBASIC-0.09□□□□□ -2.42
SHANK3Q9BYB0 RNU6-876P-201ENST00000391295 104 ntBASIC-0.09□□□□□ -2.42
SHANK3Q9BYB0 AC138393.2-201ENST00000414742 246 ntBASIC-0.09□□□□□ -2.42
SHANK3Q9BYB0 PMCHL1-202ENST00000423102 261 ntBASIC-0.09□□□□□ -2.42
SHANK3Q9BYB0 AC015818.7-201ENST00000428754 109 ntBASIC-0.09□□□□□ -2.42
SHANK3Q9BYB0 AC087499.7-201ENST00000441958 109 ntBASIC-0.09□□□□□ -2.42
SHANK3Q9BYB0 AL049861.1-201ENST00000603130 150 ntBASIC-0.09□□□□□ -2.42
SHANK3Q9BYB0 AC006157.1-201ENST00000611750 366 ntBASIC-0.09□□□□□ -2.42
SHANK3Q9BYB0 MIR30D-201ENST00000362283 70 ntBASIC-0.1□□□□□ -2.42
SHANK3Q9BYB0 RNU4-80P-201ENST00000363200 141 ntBASIC-0.1□□□□□ -2.42
SHANK3Q9BYB0 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.1□□□□□ -2.42
SHANK3Q9BYB0 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.1□□□□□ -2.42
SHANK3Q9BYB0 SNORA53-201ENST00000391141 249 ntBASIC-0.1□□□□□ -2.42
SHANK3Q9BYB0 RNU7-96P-201ENST00000459535 64 ntBASIC-0.1□□□□□ -2.42
SHANK3Q9BYB0 MRPS35P2-201ENST00000508242 191 ntBASIC-0.1□□□□□ -2.42
SHANK3Q9BYB0 RNU6-277P-201ENST00000516272 106 ntBASIC-0.1□□□□□ -2.42
SHANK3Q9BYB0 AC091304.10-201ENST00000641554 121 ntBASIC-0.1□□□□□ -2.42
SHANK3Q9BYB0 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.1□□□□□ -2.43
SHANK3Q9BYB0 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.1□□□□□ -2.43
SHANK3Q9BYB0 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.1□□□□□ -2.43
SHANK3Q9BYB0 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.1□□□□□ -2.43
SHANK3Q9BYB0 MIR224-201ENST00000384889 81 ntBASIC-0.1□□□□□ -2.43
SHANK3Q9BYB0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.1□□□□□ -2.43
SHANK3Q9BYB0 MIR548I3-201ENST00000408378 149 ntBASIC-0.1□□□□□ -2.43
SHANK3Q9BYB0 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.1□□□□□ -2.43
SHANK3Q9BYB0 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.1□□□□□ -2.43
SHANK3Q9BYB0 AC040926.1-201ENST00000530195 238 ntBASIC-0.1□□□□□ -2.43
SHANK3Q9BYB0 AC133485.4-201ENST00000561835 220 ntBASIC-0.1□□□□□ -2.43
SHANK3Q9BYB0 MIR4491-201ENST00000581087 68 ntBASIC-0.1□□□□□ -2.43
SHANK3Q9BYB0 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.11□□□□□ -2.43
SHANK3Q9BYB0 MIR644A-201ENST00000385262 94 ntBASIC-0.11□□□□□ -2.43
SHANK3Q9BYB0 RNU6-763P-201ENST00000390865 106 ntBASIC-0.11□□□□□ -2.43
SHANK3Q9BYB0 RNU7-80P-201ENST00000459562 61 ntBASIC-0.11□□□□□ -2.43
SHANK3Q9BYB0 AL132765.2-201ENST00000610812 351 ntBASIC-0.11□□□□□ -2.43
SHANK3Q9BYB0 AC093783.1-201ENST00000612976 329 ntBASIC-0.11□□□□□ -2.43
SHANK3Q9BYB0 MIR376A1-201ENST00000616574 68 ntBASIC-0.11□□□□□ -2.43
SHANK3Q9BYB0 AL662814.1-201ENST00000617364 121 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 329 ms