Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SNORD38B-201ENST00000384690 67 ntBASIC0.42□□□□□ -2.34
HDHD3Q9BSH5 RNU6-713P-201ENST00000384761 107 ntBASIC0.42□□□□□ -2.34
HDHD3Q9BSH5 MIR520E-201ENST00000384867 87 ntBASIC0.42□□□□□ -2.34
HDHD3Q9BSH5 SNORA26-201ENST00000391286 122 ntBASIC0.42□□□□□ -2.34
HDHD3Q9BSH5 MIR1302-6-201ENST00000408466 90 ntBASIC0.42□□□□□ -2.34
HDHD3Q9BSH5 Y_RNA.590-201ENST00000410140 107 ntBASIC0.42□□□□□ -2.34
HDHD3Q9BSH5 MIR18B-201ENST00000454574 71 ntBASIC0.42□□□□□ -2.34
HDHD3Q9BSH5 RNU2-11P-201ENST00000459191 187 ntBASIC0.42□□□□□ -2.34
HDHD3Q9BSH5 MIR4771-2-201ENST00000577758 74 ntBASIC0.42□□□□□ -2.34
HDHD3Q9BSH5 MIR4771-1-201ENST00000582617 74 ntBASIC0.42□□□□□ -2.34
HDHD3Q9BSH5 AC006504.6-201ENST00000590142 199 ntBASIC0.42□□□□□ -2.34
HDHD3Q9BSH5 SNORD38B-202ENST00000625943 69 ntBASIC0.42□□□□□ -2.34
HDHD3Q9BSH5 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
HDHD3Q9BSH5 SNORD12C-201ENST00000386307 89 ntBASIC0.41□□□□□ -2.34
HDHD3Q9BSH5 MIR548I3-201ENST00000408378 149 ntBASIC0.41□□□□□ -2.34
HDHD3Q9BSH5 RNU2-70P-201ENST00000410718 179 ntBASIC0.41□□□□□ -2.34
HDHD3Q9BSH5 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.41□□□□□ -2.34
HDHD3Q9BSH5 AL138752.1-201ENST00000452964 351 ntBASIC0.41□□□□□ -2.34
HDHD3Q9BSH5 MTND1P19-201ENST00000511780 315 ntBASIC0.41□□□□□ -2.34
HDHD3Q9BSH5 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
HDHD3Q9BSH5 MIR4714-201ENST00000580728 77 ntBASIC0.41□□□□□ -2.34
HDHD3Q9BSH5 MIR5197-201ENST00000583721 112 ntBASIC0.41□□□□□ -2.34
HDHD3Q9BSH5 AL365205.2-201ENST00000594586 68 ntBASIC0.41□□□□□ -2.34
HDHD3Q9BSH5 AL442067.1-201ENST00000613261 223 ntBASIC0.41□□□□□ -2.34
HDHD3Q9BSH5 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.4□□□□□ -2.35
HDHD3Q9BSH5 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
HDHD3Q9BSH5 Y_RNA.47-201ENST00000362697 108 ntBASIC0.4□□□□□ -2.35
HDHD3Q9BSH5 SNORA1.1-201ENST00000364671 133 ntBASIC0.4□□□□□ -2.35
HDHD3Q9BSH5 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
HDHD3Q9BSH5 RNU6-1292P-201ENST00000383856 107 ntBASIC0.4□□□□□ -2.35
HDHD3Q9BSH5 Y_RNA.542-201ENST00000384641 111 ntBASIC0.4□□□□□ -2.35
HDHD3Q9BSH5 MIR520F-201ENST00000384824 87 ntBASIC0.4□□□□□ -2.35
HDHD3Q9BSH5 MIR588-201ENST00000384900 83 ntBASIC0.4□□□□□ -2.35
HDHD3Q9BSH5 MIR568-201ENST00000385036 95 ntBASIC0.4□□□□□ -2.35
HDHD3Q9BSH5 MIR520H-201ENST00000385126 88 ntBASIC0.4□□□□□ -2.35
HDHD3Q9BSH5 RNU6-1165P-201ENST00000410119 107 ntBASIC0.4□□□□□ -2.35
HDHD3Q9BSH5 SNORD127-201ENST00000458892 86 ntBASIC0.4□□□□□ -2.35
HDHD3Q9BSH5 RNU4-54P-201ENST00000516428 129 ntBASIC0.4□□□□□ -2.35
HDHD3Q9BSH5 AC018659.1-201ENST00000551083 169 ntBASIC0.4□□□□□ -2.35
HDHD3Q9BSH5 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.4□□□□□ -2.35
HDHD3Q9BSH5 MIR6717-201ENST00000622747 73 ntBASIC0.4□□□□□ -2.35
HDHD3Q9BSH5 AC010332.2-201ENST00000613083 1904 ntBASIC0.4□□□□□ -2.35
HDHD3Q9BSH5 MIR18A-201ENST00000362310 71 ntBASIC0.39□□□□□ -2.35
HDHD3Q9BSH5 Y_RNA.133-201ENST00000363428 110 ntBASIC0.39□□□□□ -2.35
HDHD3Q9BSH5 RNU6-978P-201ENST00000364371 103 ntBASIC0.39□□□□□ -2.35
HDHD3Q9BSH5 Y_RNA.292-201ENST00000364904 97 ntBASIC0.39□□□□□ -2.35
HDHD3Q9BSH5 RNY4P28-201ENST00000365281 93 ntBASIC0.39□□□□□ -2.35
HDHD3Q9BSH5 RNU4-17P-201ENST00000365598 141 ntBASIC0.39□□□□□ -2.35
HDHD3Q9BSH5 RNU6-945P-201ENST00000383947 107 ntBASIC0.39□□□□□ -2.35
HDHD3Q9BSH5 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.39□□□□□ -2.35
HDHD3Q9BSH5 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
HDHD3Q9BSH5 RNU2-38P-201ENST00000410856 79 ntBASIC0.39□□□□□ -2.35
HDHD3Q9BSH5 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.39□□□□□ -2.35
HDHD3Q9BSH5 RNU7-45P-201ENST00000459460 63 ntBASIC0.39□□□□□ -2.35
HDHD3Q9BSH5 RNU6-977P-201ENST00000516411 103 ntBASIC0.39□□□□□ -2.35
HDHD3Q9BSH5 RNA5SP121-201ENST00000516537 101 ntBASIC0.39□□□□□ -2.35
HDHD3Q9BSH5 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.39□□□□□ -2.35
HDHD3Q9BSH5 AC008737.2-201ENST00000599446 118 ntBASIC0.39□□□□□ -2.35
HDHD3Q9BSH5 AC008608.1-201ENST00000603910 127 ntBASIC0.39□□□□□ -2.35
HDHD3Q9BSH5 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.38□□□□□ -2.35
HDHD3Q9BSH5 Y_RNA.176-201ENST00000363815 109 ntBASIC0.38□□□□□ -2.35
HDHD3Q9BSH5 Y_RNA.277-201ENST00000364754 102 ntBASIC0.38□□□□□ -2.35
HDHD3Q9BSH5 Y_RNA.430-201ENST00000384081 110 ntBASIC0.38□□□□□ -2.35
HDHD3Q9BSH5 Y_RNA.539-201ENST00000384635 107 ntBASIC0.38□□□□□ -2.35
HDHD3Q9BSH5 MIR125B2-201ENST00000385128 89 ntBASIC0.38□□□□□ -2.35
HDHD3Q9BSH5 SNORD100-201ENST00000408573 76 ntBASIC0.38□□□□□ -2.35
HDHD3Q9BSH5 RNA5SP222-201ENST00000411039 105 ntBASIC0.38□□□□□ -2.35
HDHD3Q9BSH5 RNU7-185P-201ENST00000459215 60 ntBASIC0.38□□□□□ -2.35
HDHD3Q9BSH5 RPS29P1-201ENST00000465274 159 ntBASIC0.38□□□□□ -2.35
HDHD3Q9BSH5 Y_RNA.668-201ENST00000516233 93 ntBASIC0.38□□□□□ -2.35
HDHD3Q9BSH5 RN7SKP12-201ENST00000516275 143 ntBASIC0.38□□□□□ -2.35
HDHD3Q9BSH5 SCARNA15-202ENST00000516881 127 ntBASIC0.38□□□□□ -2.35
HDHD3Q9BSH5 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.38□□□□□ -2.35
HDHD3Q9BSH5 MIR3612-201ENST00000579753 87 ntBASIC0.38□□□□□ -2.35
HDHD3Q9BSH5 MIR3129-201ENST00000581095 76 ntBASIC0.38□□□□□ -2.35
HDHD3Q9BSH5 SNORD92-201ENST00000585078 85 ntBASIC0.38□□□□□ -2.35
HDHD3Q9BSH5 MIR6841-201ENST00000637129 72 ntBASIC0.38□□□□□ -2.35
HDHD3Q9BSH5 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
HDHD3Q9BSH5 RNU6-1309P-201ENST00000363305 108 ntBASIC0.37□□□□□ -2.35
HDHD3Q9BSH5 RNU6-694P-201ENST00000364071 147 ntBASIC0.37□□□□□ -2.35
HDHD3Q9BSH5 Y_RNA.262-201ENST00000364641 102 ntBASIC0.37□□□□□ -2.35
HDHD3Q9BSH5 SNORD114-22-201ENST00000365423 72 ntBASIC0.37□□□□□ -2.35
HDHD3Q9BSH5 RNU6-597P-201ENST00000365620 102 ntBASIC0.37□□□□□ -2.35
HDHD3Q9BSH5 RNU6-1237P-201ENST00000384777 107 ntBASIC0.37□□□□□ -2.35
HDHD3Q9BSH5 MIR140-201ENST00000385282 100 ntBASIC0.37□□□□□ -2.35
HDHD3Q9BSH5 AC096949.1-201ENST00000412047 152 ntBASIC0.37□□□□□ -2.35
HDHD3Q9BSH5 AC098934.3-201ENST00000430450 190 ntBASIC0.37□□□□□ -2.35
HDHD3Q9BSH5 RNY3P16-201ENST00000516338 101 ntBASIC0.37□□□□□ -2.35
HDHD3Q9BSH5 RNU6-229P-201ENST00000516614 102 ntBASIC0.37□□□□□ -2.35
HDHD3Q9BSH5 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.37□□□□□ -2.35
HDHD3Q9BSH5 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.37□□□□□ -2.35
HDHD3Q9BSH5 AC090897.1-201ENST00000580909 226 ntBASIC0.37□□□□□ -2.35
HDHD3Q9BSH5 AC091932.4-201ENST00000623386 200 ntBASIC0.37□□□□□ -2.35
HDHD3Q9BSH5 RNU6-103P-201ENST00000363686 107 ntBASIC0.36□□□□□ -2.35
HDHD3Q9BSH5 Y_RNA.199-201ENST00000364014 102 ntBASIC0.36□□□□□ -2.35
HDHD3Q9BSH5 RNU6-728P-201ENST00000365375 104 ntBASIC0.36□□□□□ -2.35
HDHD3Q9BSH5 Y_RNA.351-201ENST00000365436 96 ntBASIC0.36□□□□□ -2.35
HDHD3Q9BSH5 MT-TF-201ENST00000387314 71 ntBASIC0.36□□□□□ -2.35
HDHD3Q9BSH5 RNU6-1319P-201ENST00000390855 104 ntBASIC0.36□□□□□ -2.35
HDHD3Q9BSH5 RNU6-747P-201ENST00000390928 104 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 257.6 ms