Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 RNU6-32P-201ENST00000383948 107 ntBASIC2.51□□□□□ -2.01
CALR3Q96L12 RNU6-13P-201ENST00000384248 107 ntBASIC2.51□□□□□ -2.01
CALR3Q96L12 RNU6-12P-201ENST00000384604 107 ntBASIC2.51□□□□□ -2.01
CALR3Q96L12 RNU6-41P-201ENST00000384741 107 ntBASIC2.51□□□□□ -2.01
CALR3Q96L12 AC245047.7-201ENST00000440265 293 ntBASIC2.51□□□□□ -2.01
CALR3Q96L12 RPL39P39-201ENST00000455840 151 ntBASIC2.51□□□□□ -2.01
CALR3Q96L12 AC079140.2-201ENST00000506193 142 ntBASIC2.51□□□□□ -2.01
CALR3Q96L12 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.51□□□□□ -2.01
CALR3Q96L12 RNU6-766P-201ENST00000362478 107 ntBASIC2.5□□□□□ -2.01
CALR3Q96L12 RNU6-1113P-201ENST00000384348 107 ntBASIC2.5□□□□□ -2.01
CALR3Q96L12 Y_RNA.507-201ENST00000384500 99 ntBASIC2.5□□□□□ -2.01
CALR3Q96L12 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.5□□□□□ -2.01
CALR3Q96L12 GTF3AP2-201ENST00000557014 266 ntBASIC2.5□□□□□ -2.01
CALR3Q96L12 MIR5007-201ENST00000583098 95 ntBASIC2.5□□□□□ -2.01
CALR3Q96L12 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CALR3Q96L12 RNU6-756P-201ENST00000383997 107 ntBASIC2.49□□□□□ -2.01
CALR3Q96L12 SNORA32-201ENST00000384072 121 ntBASIC2.49□□□□□ -2.01
CALR3Q96L12 SNORA51.5-201ENST00000384126 131 ntBASIC2.49□□□□□ -2.01
CALR3Q96L12 RNU6-301P-201ENST00000384277 107 ntBASIC2.49□□□□□ -2.01
CALR3Q96L12 AC090844.1-201ENST00000422019 156 ntBASIC2.49□□□□□ -2.01
CALR3Q96L12 RNU6-168P-201ENST00000516189 101 ntBASIC2.49□□□□□ -2.01
CALR3Q96L12 RNU6-947P-201ENST00000516264 106 ntBASIC2.49□□□□□ -2.01
CALR3Q96L12 MIR3198-2-201ENST00000577868 80 ntBASIC2.49□□□□□ -2.01
CALR3Q96L12 AL096840.1-201ENST00000603287 93 ntBASIC2.49□□□□□ -2.01
CALR3Q96L12 Y_RNA.773-201ENST00000607168 90 ntBASIC2.49□□□□□ -2.01
CALR3Q96L12 MIR92B-201ENST00000607575 96 ntBASIC2.49□□□□□ -2.01
CALR3Q96L12 AC026436.1-201ENST00000510537 270 ntBASIC2.48□□□□□ -2.01
CALR3Q96L12 MIR1255B1-201ENST00000636325 63 ntBASIC2.48□□□□□ -2.01
CALR3Q96L12 Y_RNA.328-201ENST00000365208 113 ntBASIC2.47□□□□□ -2.01
CALR3Q96L12 Y_RNA.495-201ENST00000384435 112 ntBASIC2.47□□□□□ -2.01
CALR3Q96L12 RNU6-1065P-201ENST00000384513 106 ntBASIC2.47□□□□□ -2.01
CALR3Q96L12 AC019129.1-201ENST00000403786 261 ntBASIC2.47□□□□□ -2.01
CALR3Q96L12 RNA5SP184-201ENST00000411071 108 ntBASIC2.47□□□□□ -2.01
CALR3Q96L12 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.47□□□□□ -2.01
CALR3Q96L12 MIR1270-201ENST00000459320 83 ntBASIC2.47□□□□□ -2.01
CALR3Q96L12 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.47□□□□□ -2.01
CALR3Q96L12 SNORA70.24-201ENST00000517233 118 ntBASIC2.47□□□□□ -2.01
CALR3Q96L12 AC019176.1-201ENST00000518519 225 ntBASIC2.47□□□□□ -2.01
CALR3Q96L12 AC064859.1-201ENST00000624741 174 ntBASIC2.47□□□□□ -2.01
CALR3Q96L12 AP000553.5-201ENST00000641933 54 ntBASIC2.47□□□□□ -2.01
CALR3Q96L12 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.47□□□□□ -2.01
CALR3Q96L12 AC062016.1-201ENST00000355719 319 ntBASIC2.46□□□□□ -2.02
CALR3Q96L12 RNU6-363P-201ENST00000362895 105 ntBASIC2.46□□□□□ -2.02
CALR3Q96L12 SNORA18-201ENST00000384416 132 ntBASIC2.46□□□□□ -2.02
CALR3Q96L12 RNU6-342P-201ENST00000384521 104 ntBASIC2.46□□□□□ -2.02
CALR3Q96L12 MIR676-201ENST00000390702 67 ntBASIC2.46□□□□□ -2.02
CALR3Q96L12 RNA5SP89-201ENST00000410300 108 ntBASIC2.46□□□□□ -2.02
CALR3Q96L12 MIR3937-201ENST00000580135 106 ntBASIC2.46□□□□□ -2.02
CALR3Q96L12 MIR6766-201ENST00000622641 72 ntBASIC2.46□□□□□ -2.02
CALR3Q96L12 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CALR3Q96L12 RNU4-67P-201ENST00000364569 141 ntBASIC2.45□□□□□ -2.02
CALR3Q96L12 RNA5SP37-201ENST00000365420 130 ntBASIC2.45□□□□□ -2.02
CALR3Q96L12 RNU6-616P-201ENST00000384353 107 ntBASIC2.45□□□□□ -2.02
CALR3Q96L12 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.45□□□□□ -2.02
CALR3Q96L12 RPL30P7-201ENST00000479312 323 ntBASIC2.45□□□□□ -2.02
CALR3Q96L12 AC104435.1-201ENST00000483483 166 ntBASIC2.45□□□□□ -2.02
CALR3Q96L12 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.45□□□□□ -2.02
CALR3Q96L12 SNRPGP19-201ENST00000603826 189 ntBASIC2.45□□□□□ -2.02
CALR3Q96L12 Y_RNA.78-201ENST00000362970 110 ntBASIC2.44□□□□□ -2.02
CALR3Q96L12 Y_RNA.155-201ENST00000363632 101 ntBASIC2.44□□□□□ -2.02
CALR3Q96L12 RNA5SP68-201ENST00000363885 119 ntBASIC2.44□□□□□ -2.02
CALR3Q96L12 RNU6-409P-201ENST00000384114 104 ntBASIC2.44□□□□□ -2.02
CALR3Q96L12 MIR196B-201ENST00000384852 84 ntBASIC2.44□□□□□ -2.02
CALR3Q96L12 SNORA48.3-201ENST00000391081 134 ntBASIC2.44□□□□□ -2.02
CALR3Q96L12 AC027119.1-201ENST00000440877 241 ntBASIC2.44□□□□□ -2.02
CALR3Q96L12 AL133373.1-201ENST00000497098 94 ntBASIC2.44□□□□□ -2.02
CALR3Q96L12 RNU7-35P-201ENST00000517174 62 ntBASIC2.44□□□□□ -2.02
CALR3Q96L12 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.44□□□□□ -2.02
CALR3Q96L12 FAM71BP1-201ENST00000604431 523 ntBASIC2.44□□□□□ -2.02
CALR3Q96L12 PRELID3BP2-201ENST00000605362 201 ntBASIC2.44□□□□□ -2.02
CALR3Q96L12 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CALR3Q96L12 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.44□□□□□ -2.02
CALR3Q96L12 AL359851.1-201ENST00000569460 4997 ntBASIC2.43□□□□□ -2.02
CALR3Q96L12 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CALR3Q96L12 SNORA25.3-201ENST00000363205 127 ntBASIC2.43□□□□□ -2.02
CALR3Q96L12 RNU6-396P-201ENST00000365369 105 ntBASIC2.43□□□□□ -2.02
CALR3Q96L12 RPL31P63-201ENST00000422565 375 ntBASIC2.43□□□□□ -2.02
CALR3Q96L12 AP000942.3-201ENST00000603702 160 ntBASIC2.43□□□□□ -2.02
CALR3Q96L12 MIR6817-201ENST00000615588 66 ntBASIC2.43□□□□□ -2.02
CALR3Q96L12 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
CALR3Q96L12 MIR1302-7-201ENST00000408841 72 ntBASIC2.42□□□□□ -2.02
CALR3Q96L12 RNU6-733P-201ENST00000410759 104 ntBASIC2.42□□□□□ -2.02
CALR3Q96L12 AC074050.1-201ENST00000563247 211 ntBASIC2.42□□□□□ -2.02
CALR3Q96L12 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.42□□□□□ -2.02
CALR3Q96L12 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CALR3Q96L12 ZNF658B-202ENST00000615961 3375 ntBASIC2.41□□□□□ -2.02
CALR3Q96L12 RNU6-1086P-201ENST00000410930 100 ntBASIC2.41□□□□□ -2.02
CALR3Q96L12 snoU13.25-201ENST00000458945 104 ntBASIC2.41□□□□□ -2.02
CALR3Q96L12 AC008834.1-201ENST00000511612 175 ntBASIC2.41□□□□□ -2.02
CALR3Q96L12 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.41□□□□□ -2.02
CALR3Q96L12 AC008413.1-201ENST00000511864 177 ntBASIC2.41□□□□□ -2.02
CALR3Q96L12 MIR4319-201ENST00000577285 85 ntBASIC2.41□□□□□ -2.02
CALR3Q96L12 MIR3664-201ENST00000579074 99 ntBASIC2.41□□□□□ -2.02
CALR3Q96L12 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.41□□□□□ -2.02
CALR3Q96L12 MIR7106-201ENST00000612419 65 ntBASIC2.41□□□□□ -2.02
CALR3Q96L12 MIR128-1-201ENST00000384921 82 ntBASIC2.4□□□□□ -2.03
CALR3Q96L12 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.4□□□□□ -2.03
CALR3Q96L12 COTL1P1-201ENST00000422309 375 ntBASIC2.4□□□□□ -2.03
CALR3Q96L12 RNA5SP445-201ENST00000515889 115 ntBASIC2.4□□□□□ -2.03
CALR3Q96L12 RNA5SP200-201ENST00000516360 103 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 312.1 ms