Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SCUBE3Q8IX30 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SCUBE3Q8IX30 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.15□□□□□ -1.9
SCUBE3Q8IX30 MIR660-201ENST00000385235 97 ntBASIC3.15□□□□□ -1.91
SCUBE3Q8IX30 RNA5SP356-201ENST00000515972 94 ntBASIC3.15□□□□□ -1.91
SCUBE3Q8IX30 RNU6-557P-201ENST00000516842 110 ntBASIC3.15□□□□□ -1.91
SCUBE3Q8IX30 AC022202.1-201ENST00000613515 211 ntBASIC3.15□□□□□ -1.91
SCUBE3Q8IX30 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.15□□□□□ -1.91
SCUBE3Q8IX30 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SCUBE3Q8IX30 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SCUBE3Q8IX30 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.14□□□□□ -1.91
SCUBE3Q8IX30 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SCUBE3Q8IX30 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SCUBE3Q8IX30 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
SCUBE3Q8IX30 HSBP1P2-201ENST00000299671 229 ntBASIC3.14□□□□□ -1.91
SCUBE3Q8IX30 RNU6-1237P-201ENST00000384777 107 ntBASIC3.14□□□□□ -1.91
SCUBE3Q8IX30 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SCUBE3Q8IX30 RNU11-3P-201ENST00000391111 133 ntBASIC3.14□□□□□ -1.91
SCUBE3Q8IX30 SNORA40.18-201ENST00000391200 128 ntBASIC3.14□□□□□ -1.91
SCUBE3Q8IX30 RNU6-380P-201ENST00000410207 107 ntBASIC3.14□□□□□ -1.91
SCUBE3Q8IX30 RNU2-7P-201ENST00000410794 178 ntBASIC3.14□□□□□ -1.91
SCUBE3Q8IX30 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.14□□□□□ -1.91
SCUBE3Q8IX30 snoU13.11-201ENST00000459219 104 ntBASIC3.14□□□□□ -1.91
SCUBE3Q8IX30 RPS29P11-201ENST00000496507 171 ntBASIC3.14□□□□□ -1.91
SCUBE3Q8IX30 RNU6-237P-201ENST00000515985 71 ntBASIC3.14□□□□□ -1.91
SCUBE3Q8IX30 AC245166.1-201ENST00000521012 253 ntBASIC3.14□□□□□ -1.91
SCUBE3Q8IX30 CYP3A52P-201ENST00000563326 91 ntBASIC3.14□□□□□ -1.91
SCUBE3Q8IX30 MIR4506-201ENST00000584693 77 ntBASIC3.14□□□□□ -1.91
SCUBE3Q8IX30 AC021506.2-201ENST00000612354 169 ntBASIC3.14□□□□□ -1.91
SCUBE3Q8IX30 Y_RNA.788-201ENST00000622394 112 ntBASIC3.14□□□□□ -1.91
SCUBE3Q8IX30 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SCUBE3Q8IX30 RNY1P13-201ENST00000365030 105 ntBASIC3.13□□□□□ -1.91
SCUBE3Q8IX30 MIR520A-201ENST00000384862 85 ntBASIC3.13□□□□□ -1.91
SCUBE3Q8IX30 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.13□□□□□ -1.91
SCUBE3Q8IX30 UQCRHP3-201ENST00000451503 251 ntBASIC3.13□□□□□ -1.91
SCUBE3Q8IX30 RNU6-917P-201ENST00000516294 104 ntBASIC3.13□□□□□ -1.91
SCUBE3Q8IX30 MIR4435-1-201ENST00000582552 80 ntBASIC3.13□□□□□ -1.91
SCUBE3Q8IX30 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SCUBE3Q8IX30 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.13□□□□□ -1.91
SCUBE3Q8IX30 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SCUBE3Q8IX30 MIR1261-201ENST00000408659 82 ntBASIC3.12□□□□□ -1.91
SCUBE3Q8IX30 RN7SL633P-201ENST00000488974 297 ntBASIC3.12□□□□□ -1.91
SCUBE3Q8IX30 RNU7-43P-201ENST00000516554 64 ntBASIC3.12□□□□□ -1.91
SCUBE3Q8IX30 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC3.12□□□□□ -1.91
SCUBE3Q8IX30 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SCUBE3Q8IX30 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SCUBE3Q8IX30 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.12□□□□□ -1.91
SCUBE3Q8IX30 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SCUBE3Q8IX30 MIRLET7A1-201ENST00000362295 80 ntBASIC3.11□□□□□ -1.91
SCUBE3Q8IX30 RNU6-686P-201ENST00000364839 107 ntBASIC3.11□□□□□ -1.91
SCUBE3Q8IX30 MIR597-201ENST00000384968 97 ntBASIC3.11□□□□□ -1.91
SCUBE3Q8IX30 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SCUBE3Q8IX30 AC022018.1-201ENST00000430685 241 ntBASIC3.11□□□□□ -1.91
SCUBE3Q8IX30 RN7SL75P-201ENST00000461926 281 ntBASIC3.11□□□□□ -1.91
SCUBE3Q8IX30 RNU6-539P-201ENST00000516665 103 ntBASIC3.11□□□□□ -1.91
SCUBE3Q8IX30 AC133485.1-201ENST00000567176 124 ntBASIC3.11□□□□□ -1.91
SCUBE3Q8IX30 MIR4709-201ENST00000577272 72 ntBASIC3.11□□□□□ -1.91
SCUBE3Q8IX30 AL512598.1-201ENST00000610158 273 ntBASIC3.11□□□□□ -1.91
SCUBE3Q8IX30 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC3.11□□□□□ -1.91
SCUBE3Q8IX30 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
SCUBE3Q8IX30 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.11□□□□□ -1.91
SCUBE3Q8IX30 Y_RNA.508-201ENST00000384502 114 ntBASIC3.1□□□□□ -1.91
SCUBE3Q8IX30 AL023284.1-201ENST00000403956 276 ntBASIC3.1□□□□□ -1.91
SCUBE3Q8IX30 AP000753.3-201ENST00000604083 169 ntBASIC3.1□□□□□ -1.91
SCUBE3Q8IX30 AC008133.2-201ENST00000624540 351 ntBASIC3.1□□□□□ -1.91
SCUBE3Q8IX30 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
SCUBE3Q8IX30 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.1□□□□□ -1.91
SCUBE3Q8IX30 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SCUBE3Q8IX30 SNORA63.2-201ENST00000362603 126 ntBASIC3.09□□□□□ -1.91
SCUBE3Q8IX30 SNORD38B-201ENST00000384690 67 ntBASIC3.09□□□□□ -1.91
SCUBE3Q8IX30 RN7SKP123-201ENST00000410732 291 ntBASIC3.09□□□□□ -1.91
SCUBE3Q8IX30 SNORA31.26-201ENST00000517250 137 ntBASIC3.09□□□□□ -1.91
SCUBE3Q8IX30 GTF3AP2-201ENST00000557014 266 ntBASIC3.09□□□□□ -1.91
SCUBE3Q8IX30 MIR3126-201ENST00000577443 74 ntBASIC3.09□□□□□ -1.91
SCUBE3Q8IX30 MIR3134-201ENST00000579433 74 ntBASIC3.09□□□□□ -1.91
SCUBE3Q8IX30 SNORD38B-202ENST00000625943 69 ntBASIC3.09□□□□□ -1.91
SCUBE3Q8IX30 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SCUBE3Q8IX30 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SCUBE3Q8IX30 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SCUBE3Q8IX30 RNY1P2-201ENST00000364820 117 ntBASIC3.08□□□□□ -1.92
SCUBE3Q8IX30 RNU6-411P-201ENST00000384451 107 ntBASIC3.08□□□□□ -1.92
SCUBE3Q8IX30 SCARNA18B-201ENST00000458806 135 ntBASIC3.08□□□□□ -1.92
SCUBE3Q8IX30 RNA5SP437-201ENST00000517249 129 ntBASIC3.08□□□□□ -1.92
SCUBE3Q8IX30 MIR4764-201ENST00000580680 88 ntBASIC3.08□□□□□ -1.92
SCUBE3Q8IX30 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SCUBE3Q8IX30 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SCUBE3Q8IX30 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
SCUBE3Q8IX30 RNU1-91P-201ENST00000364746 163 ntBASIC3.07□□□□□ -1.92
SCUBE3Q8IX30 RNA5SP237-201ENST00000410414 113 ntBASIC3.07□□□□□ -1.92
SCUBE3Q8IX30 RNU6-871P-201ENST00000516122 100 ntBASIC3.07□□□□□ -1.92
SCUBE3Q8IX30 RNVU1-2-201ENST00000516326 135 ntBASIC3.07□□□□□ -1.92
SCUBE3Q8IX30 AC141846.1-201ENST00000568348 142 ntBASIC3.07□□□□□ -1.92
SCUBE3Q8IX30 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.07□□□□□ -1.92
SCUBE3Q8IX30 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.07□□□□□ -1.92
SCUBE3Q8IX30 RNU4-82P-201ENST00000362443 140 ntBASIC3.06□□□□□ -1.92
SCUBE3Q8IX30 EEF1A1P41-201ENST00000414667 207 ntBASIC3.06□□□□□ -1.92
SCUBE3Q8IX30 AC011753.1-201ENST00000451001 220 ntBASIC3.06□□□□□ -1.92
SCUBE3Q8IX30 RNU7-85P-201ENST00000458851 63 ntBASIC3.06□□□□□ -1.92
SCUBE3Q8IX30 snoU13.27-201ENST00000459278 104 ntBASIC3.06□□□□□ -1.92
SCUBE3Q8IX30 AC099513.1-201ENST00000490423 301 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 281.6 ms