Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AC108059.2-201ENST00000434626 151 ntBASIC1.36□□□□□ -2.19
PPP4R4Q6NUP7 RNU7-121P-201ENST00000516604 62 ntBASIC1.36□□□□□ -2.19
PPP4R4Q6NUP7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.36□□□□□ -2.19
PPP4R4Q6NUP7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.36□□□□□ -2.19
PPP4R4Q6NUP7 AL020996.3-201ENST00000606617 222 ntBASIC1.36□□□□□ -2.19
PPP4R4Q6NUP7 RNY1P10-201ENST00000363268 113 ntBASIC1.35□□□□□ -2.19
PPP4R4Q6NUP7 RNU6-60P-201ENST00000364792 103 ntBASIC1.35□□□□□ -2.19
PPP4R4Q6NUP7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.35□□□□□ -2.19
PPP4R4Q6NUP7 RNU6-613P-201ENST00000410412 108 ntBASIC1.35□□□□□ -2.19
PPP4R4Q6NUP7 AL035398.1-201ENST00000430869 322 ntBASIC1.35□□□□□ -2.19
PPP4R4Q6NUP7 RNU2-11P-201ENST00000459191 187 ntBASIC1.35□□□□□ -2.19
PPP4R4Q6NUP7 OR2A41P-201ENST00000473586 105 ntBASIC1.35□□□□□ -2.19
PPP4R4Q6NUP7 MIR3658-201ENST00000636291 56 ntBASIC1.35□□□□□ -2.19
PPP4R4Q6NUP7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.34□□□□□ -2.19
PPP4R4Q6NUP7 RNY1P11-201ENST00000363759 113 ntBASIC1.34□□□□□ -2.19
PPP4R4Q6NUP7 Y_RNA.521-201ENST00000384560 114 ntBASIC1.34□□□□□ -2.19
PPP4R4Q6NUP7 RNU6-239P-201ENST00000390990 99 ntBASIC1.34□□□□□ -2.19
PPP4R4Q6NUP7 RNA5SP95-201ENST00000410319 137 ntBASIC1.34□□□□□ -2.19
PPP4R4Q6NUP7 AP1B1P2-201ENST00000416196 106 ntBASIC1.34□□□□□ -2.19
PPP4R4Q6NUP7 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.34□□□□□ -2.19
PPP4R4Q6NUP7 MIR4781-201ENST00000585250 76 ntBASIC1.34□□□□□ -2.19
PPP4R4Q6NUP7 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.34□□□□□ -2.19
PPP4R4Q6NUP7 FTX_2.1-201ENST00000618816 94 ntBASIC1.34□□□□□ -2.19
PPP4R4Q6NUP7 AC091932.4-201ENST00000623386 200 ntBASIC1.34□□□□□ -2.19
PPP4R4Q6NUP7 SNORA25.7-201ENST00000364375 127 ntBASIC1.33□□□□□ -2.2
PPP4R4Q6NUP7 Y_RNA.330-201ENST00000365230 109 ntBASIC1.33□□□□□ -2.2
PPP4R4Q6NUP7 Y_RNA.351-201ENST00000365436 96 ntBASIC1.33□□□□□ -2.2
PPP4R4Q6NUP7 MIR758-201ENST00000390227 88 ntBASIC1.33□□□□□ -2.2
PPP4R4Q6NUP7 SNORA26.6-201ENST00000391256 115 ntBASIC1.33□□□□□ -2.2
PPP4R4Q6NUP7 MIR548I3-201ENST00000408378 149 ntBASIC1.33□□□□□ -2.2
PPP4R4Q6NUP7 RNU6-1135P-201ENST00000411083 103 ntBASIC1.33□□□□□ -2.2
PPP4R4Q6NUP7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.33□□□□□ -2.2
PPP4R4Q6NUP7 Y_RNA.662-201ENST00000516028 97 ntBASIC1.33□□□□□ -2.2
PPP4R4Q6NUP7 RNU7-53P-201ENST00000516705 60 ntBASIC1.33□□□□□ -2.2
PPP4R4Q6NUP7 AC036111.3-201ENST00000526389 112 ntBASIC1.33□□□□□ -2.2
PPP4R4Q6NUP7 HSPE1P19-201ENST00000603327 295 ntBASIC1.33□□□□□ -2.2
PPP4R4Q6NUP7 Z97988.1-201ENST00000637697 135 ntBASIC1.33□□□□□ -2.2
PPP4R4Q6NUP7 AL391516.1-201ENST00000554380 2449 ntBASIC1.32□□□□□ -2.2
PPP4R4Q6NUP7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.32□□□□□ -2.2
PPP4R4Q6NUP7 Y_RNA.337-201ENST00000365312 102 ntBASIC1.32□□□□□ -2.2
PPP4R4Q6NUP7 MIR200A-201ENST00000384875 90 ntBASIC1.32□□□□□ -2.2
PPP4R4Q6NUP7 AC244023.1-201ENST00000426884 112 ntBASIC1.32□□□□□ -2.2
PPP4R4Q6NUP7 TRMT112P2-201ENST00000512910 132 ntBASIC1.32□□□□□ -2.2
PPP4R4Q6NUP7 MIR2115-201ENST00000516657 100 ntBASIC1.32□□□□□ -2.2
PPP4R4Q6NUP7 RNU6-1149P-201ENST00000516810 97 ntBASIC1.32□□□□□ -2.2
PPP4R4Q6NUP7 RNU6-182P-201ENST00000516970 105 ntBASIC1.32□□□□□ -2.2
PPP4R4Q6NUP7 AC131055.1-201ENST00000584626 316 ntBASIC1.32□□□□□ -2.2
PPP4R4Q6NUP7 AC242498.1-201ENST00000604134 111 ntBASIC1.32□□□□□ -2.2
PPP4R4Q6NUP7 ZNF209P-201ENST00000593450 2304 ntBASIC1.31□□□□□ -2.2
PPP4R4Q6NUP7 Y_RNA.52-201ENST00000362760 96 ntBASIC1.31□□□□□ -2.2
PPP4R4Q6NUP7 U8.1-201ENST00000362843 134 ntBASIC1.31□□□□□ -2.2
PPP4R4Q6NUP7 RNU7-45P-201ENST00000459460 63 ntBASIC1.31□□□□□ -2.2
PPP4R4Q6NUP7 SNORD124-201ENST00000459577 104 ntBASIC1.31□□□□□ -2.2
PPP4R4Q6NUP7 AC068338.1-201ENST00000565567 176 ntBASIC1.31□□□□□ -2.2
PPP4R4Q6NUP7 AC023827.1-201ENST00000569247 97 ntBASIC1.31□□□□□ -2.2
PPP4R4Q6NUP7 AL359821.1-201ENST00000605519 182 ntBASIC1.31□□□□□ -2.2
PPP4R4Q6NUP7 AL157834.3-201ENST00000615543 103 ntBASIC1.31□□□□□ -2.2
PPP4R4Q6NUP7 MTND5P32-201ENST00000560711 1802 ntBASIC1.31□□□□□ -2.2
PPP4R4Q6NUP7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
PPP4R4Q6NUP7 MIR342-201ENST00000362212 99 ntBASIC1.3□□□□□ -2.2
PPP4R4Q6NUP7 Y_RNA.150-201ENST00000363562 102 ntBASIC1.3□□□□□ -2.2
PPP4R4Q6NUP7 Y_RNA.272-201ENST00000364696 102 ntBASIC1.3□□□□□ -2.2
PPP4R4Q6NUP7 RNU6-396P-201ENST00000365369 105 ntBASIC1.3□□□□□ -2.2
PPP4R4Q6NUP7 MT-TN-201ENST00000387400 73 ntBASIC1.3□□□□□ -2.2
PPP4R4Q6NUP7 RNU6-321P-201ENST00000410912 106 ntBASIC1.3□□□□□ -2.2
PPP4R4Q6NUP7 RNA5SP236-201ENST00000516169 116 ntBASIC1.3□□□□□ -2.2
PPP4R4Q6NUP7 SNORD114-24-201ENST00000365029 72 ntBASIC1.29□□□□□ -2.2
PPP4R4Q6NUP7 Y_RNA.357-201ENST00000365487 109 ntBASIC1.29□□□□□ -2.2
PPP4R4Q6NUP7 RNU6-886P-201ENST00000384319 105 ntBASIC1.29□□□□□ -2.2
PPP4R4Q6NUP7 RNU7-95P-201ENST00000459222 64 ntBASIC1.29□□□□□ -2.2
PPP4R4Q6NUP7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.29□□□□□ -2.2
PPP4R4Q6NUP7 AC106800.4-201ENST00000614905 153 ntBASIC1.29□□□□□ -2.2
PPP4R4Q6NUP7 AC012676.2-201ENST00000619258 186 ntBASIC1.29□□□□□ -2.2
PPP4R4Q6NUP7 MIR377-201ENST00000362145 69 ntBASIC1.28□□□□□ -2.2
PPP4R4Q6NUP7 RNU6-818P-201ENST00000364837 108 ntBASIC1.28□□□□□ -2.2
PPP4R4Q6NUP7 RNU6-580P-201ENST00000365159 107 ntBASIC1.28□□□□□ -2.2
PPP4R4Q6NUP7 SNORA75.5-201ENST00000391291 81 ntBASIC1.28□□□□□ -2.2
PPP4R4Q6NUP7 RNU6-588P-201ENST00000410281 105 ntBASIC1.28□□□□□ -2.2
PPP4R4Q6NUP7 RNU6-394P-201ENST00000410735 107 ntBASIC1.28□□□□□ -2.2
PPP4R4Q6NUP7 RNU6-602P-201ENST00000411155 105 ntBASIC1.28□□□□□ -2.2
PPP4R4Q6NUP7 MRPL35P3-201ENST00000421557 364 ntBASIC1.28□□□□□ -2.2
PPP4R4Q6NUP7 RN7SKP179-201ENST00000516126 217 ntBASIC1.28□□□□□ -2.2
PPP4R4Q6NUP7 RNU2-60P-201ENST00000517290 128 ntBASIC1.28□□□□□ -2.2
PPP4R4Q6NUP7 DNAJC19P2-201ENST00000593340 302 ntBASIC1.28□□□□□ -2.2
PPP4R4Q6NUP7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
PPP4R4Q6NUP7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
PPP4R4Q6NUP7 Y_RNA.168-201ENST00000363740 102 ntBASIC1.27□□□□□ -2.21
PPP4R4Q6NUP7 Y_RNA.226-201ENST00000364337 114 ntBASIC1.27□□□□□ -2.21
PPP4R4Q6NUP7 Y_RNA.497-201ENST00000384447 98 ntBASIC1.27□□□□□ -2.21
PPP4R4Q6NUP7 RNU7-80P-201ENST00000459562 61 ntBASIC1.27□□□□□ -2.21
PPP4R4Q6NUP7 MIR3646-201ENST00000578301 84 ntBASIC1.27□□□□□ -2.21
PPP4R4Q6NUP7 uc_338.6-201ENST00000613544 171 ntBASIC1.27□□□□□ -2.21
PPP4R4Q6NUP7 AL596211.1-201ENST00000569873 2277 ntBASIC1.27□□□□□ -2.21
PPP4R4Q6NUP7 SNORA7.1-201ENST00000363750 139 ntBASIC1.26□□□□□ -2.21
PPP4R4Q6NUP7 RNU6-1130P-201ENST00000365434 107 ntBASIC1.26□□□□□ -2.21
PPP4R4Q6NUP7 RNU6-205P-201ENST00000390858 107 ntBASIC1.26□□□□□ -2.21
PPP4R4Q6NUP7 RNU6-907P-201ENST00000390924 102 ntBASIC1.26□□□□□ -2.21
PPP4R4Q6NUP7 MIR1287-201ENST00000408492 90 ntBASIC1.26□□□□□ -2.21
PPP4R4Q6NUP7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.26□□□□□ -2.21
PPP4R4Q6NUP7 RNU6-94P-201ENST00000607728 107 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms