Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.99□□□□□ -2.09
KRT40Q6A162 SNORD115-34-201ENST00000362441 82 ntBASIC1.98□□□□□ -2.09
KRT40Q6A162 SNORD115-12-201ENST00000362583 82 ntBASIC1.98□□□□□ -2.09
KRT40Q6A162 SNORD115-29-201ENST00000362834 82 ntBASIC1.98□□□□□ -2.09
KRT40Q6A162 SNORD115-9-201ENST00000362912 82 ntBASIC1.98□□□□□ -2.09
KRT40Q6A162 SNORD115-21-201ENST00000362963 81 ntBASIC1.98□□□□□ -2.09
KRT40Q6A162 SNORD115-14-201ENST00000363090 81 ntBASIC1.98□□□□□ -2.09
KRT40Q6A162 SNORD115-13-201ENST00000363358 82 ntBASIC1.98□□□□□ -2.09
KRT40Q6A162 SNORD115-41-201ENST00000363608 82 ntBASIC1.98□□□□□ -2.09
KRT40Q6A162 SNORD115-11-201ENST00000363616 82 ntBASIC1.98□□□□□ -2.09
KRT40Q6A162 SNORD115-5-201ENST00000363633 82 ntBASIC1.98□□□□□ -2.09
KRT40Q6A162 SNORD115-39-201ENST00000363694 82 ntBASIC1.98□□□□□ -2.09
KRT40Q6A162 SNORD115-4-201ENST00000363810 82 ntBASIC1.98□□□□□ -2.09
KRT40Q6A162 SNORD115-16-201ENST00000363887 82 ntBASIC1.98□□□□□ -2.09
KRT40Q6A162 SNORD115-6-201ENST00000363942 82 ntBASIC1.98□□□□□ -2.09
KRT40Q6A162 SNORD115-42-201ENST00000364273 82 ntBASIC1.98□□□□□ -2.09
KRT40Q6A162 SNORD115-15-201ENST00000364809 81 ntBASIC1.98□□□□□ -2.09
KRT40Q6A162 SNORD115-1-201ENST00000364961 82 ntBASIC1.98□□□□□ -2.09
KRT40Q6A162 SNORD115-26-201ENST00000365067 82 ntBASIC1.98□□□□□ -2.09
KRT40Q6A162 SNORD115-10-201ENST00000365073 81 ntBASIC1.98□□□□□ -2.09
KRT40Q6A162 SNORD115-43-201ENST00000365503 82 ntBASIC1.98□□□□□ -2.09
KRT40Q6A162 SNORD115-36-201ENST00000365629 82 ntBASIC1.98□□□□□ -2.09
KRT40Q6A162 SNORA27-201ENST00000384323 126 ntBASIC1.98□□□□□ -2.09
KRT40Q6A162 RNU6-360P-201ENST00000390944 104 ntBASIC1.98□□□□□ -2.09
KRT40Q6A162 SNORD28B-201ENST00000390993 75 ntBASIC1.98□□□□□ -2.09
KRT40Q6A162 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.98□□□□□ -2.09
KRT40Q6A162 SNORD115-40-201ENST00000606510 82 ntBASIC1.98□□□□□ -2.09
KRT40Q6A162 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.98□□□□□ -2.09
KRT40Q6A162 SNORA63.4-201ENST00000362763 126 ntBASIC1.97□□□□□ -2.09
KRT40Q6A162 RNU1-133P-201ENST00000364867 167 ntBASIC1.97□□□□□ -2.09
KRT40Q6A162 RNU6-439P-201ENST00000384188 106 ntBASIC1.97□□□□□ -2.09
KRT40Q6A162 RNY1P6-201ENST00000384193 109 ntBASIC1.97□□□□□ -2.09
KRT40Q6A162 Y_RNA.528-201ENST00000384575 108 ntBASIC1.97□□□□□ -2.09
KRT40Q6A162 AL161935.2-201ENST00000414627 60 ntBASIC1.97□□□□□ -2.09
KRT40Q6A162 RNU6-998P-201ENST00000515894 101 ntBASIC1.97□□□□□ -2.09
KRT40Q6A162 Y_RNA.709-201ENST00000516952 92 ntBASIC1.97□□□□□ -2.09
KRT40Q6A162 MIR4287-201ENST00000579398 78 ntBASIC1.97□□□□□ -2.09
KRT40Q6A162 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.97□□□□□ -2.09
KRT40Q6A162 AL596211.1-201ENST00000569873 2277 ntBASIC1.97□□□□□ -2.09
KRT40Q6A162 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRT40Q6A162 Y_RNA.35-201ENST00000362601 101 ntBASIC1.96□□□□□ -2.1
KRT40Q6A162 RNU6-690P-201ENST00000365242 106 ntBASIC1.96□□□□□ -2.1
KRT40Q6A162 MIR136-201ENST00000385207 82 ntBASIC1.96□□□□□ -2.1
KRT40Q6A162 MT-TI-201ENST00000387365 69 ntBASIC1.96□□□□□ -2.1
KRT40Q6A162 MIR1267-201ENST00000408723 78 ntBASIC1.96□□□□□ -2.1
KRT40Q6A162 SNX2P2-201ENST00000424553 323 ntBASIC1.96□□□□□ -2.1
KRT40Q6A162 RPS29P24-201ENST00000486345 171 ntBASIC1.96□□□□□ -2.1
KRT40Q6A162 RNU2-13P-201ENST00000515909 113 ntBASIC1.96□□□□□ -2.1
KRT40Q6A162 RNU6-917P-201ENST00000516294 104 ntBASIC1.96□□□□□ -2.1
KRT40Q6A162 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
KRT40Q6A162 MIR342-201ENST00000362212 99 ntBASIC1.95□□□□□ -2.1
KRT40Q6A162 Y_RNA.346-201ENST00000365385 112 ntBASIC1.95□□□□□ -2.1
KRT40Q6A162 MIR548A1-201ENST00000385041 97 ntBASIC1.95□□□□□ -2.1
KRT40Q6A162 MIR548A3-201ENST00000385297 97 ntBASIC1.95□□□□□ -2.1
KRT40Q6A162 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.95□□□□□ -2.1
KRT40Q6A162 AC063976.4-201ENST00000421971 163 ntBASIC1.95□□□□□ -2.1
KRT40Q6A162 Y_RNA.649-201ENST00000459077 103 ntBASIC1.95□□□□□ -2.1
KRT40Q6A162 SNORD123-201ENST00000459473 70 ntBASIC1.95□□□□□ -2.1
KRT40Q6A162 RNY4P20-201ENST00000516678 93 ntBASIC1.95□□□□□ -2.1
KRT40Q6A162 AC022254.1-201ENST00000567857 235 ntBASIC1.95□□□□□ -2.1
KRT40Q6A162 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.95□□□□□ -2.1
KRT40Q6A162 MIR548AR-201ENST00000582191 57 ntBASIC1.95□□□□□ -2.1
KRT40Q6A162 AC078899.2-201ENST00000595282 212 ntBASIC1.95□□□□□ -2.1
KRT40Q6A162 AL096840.1-201ENST00000603287 93 ntBASIC1.95□□□□□ -2.1
KRT40Q6A162 AL627230.6-201ENST00000611129 280 ntBASIC1.95□□□□□ -2.1
KRT40Q6A162 RNU6-153P-201ENST00000364422 104 ntBASIC1.94□□□□□ -2.1
KRT40Q6A162 RNU4-16P-201ENST00000364737 141 ntBASIC1.94□□□□□ -2.1
KRT40Q6A162 Y_RNA.327-201ENST00000365201 102 ntBASIC1.94□□□□□ -2.1
KRT40Q6A162 SNORD116-21-201ENST00000384507 92 ntBASIC1.94□□□□□ -2.1
KRT40Q6A162 RNU7-96P-201ENST00000459535 64 ntBASIC1.94□□□□□ -2.1
KRT40Q6A162 RNU7-80P-201ENST00000459562 61 ntBASIC1.94□□□□□ -2.1
KRT40Q6A162 AL121890.5-201ENST00000620848 304 ntBASIC1.94□□□□□ -2.1
KRT40Q6A162 MIR570-201ENST00000384917 97 ntBASIC1.93□□□□□ -2.1
KRT40Q6A162 RNA5SP136-201ENST00000410906 107 ntBASIC1.93□□□□□ -2.1
KRT40Q6A162 RNU2-11P-201ENST00000459191 187 ntBASIC1.93□□□□□ -2.1
KRT40Q6A162 RNA5SP57-201ENST00000459463 123 ntBASIC1.93□□□□□ -2.1
KRT40Q6A162 COX6CP6-201ENST00000490840 228 ntBASIC1.93□□□□□ -2.1
KRT40Q6A162 RNU7-123P-201ENST00000515911 60 ntBASIC1.93□□□□□ -2.1
KRT40Q6A162 RNU2-35P-201ENST00000516446 142 ntBASIC1.93□□□□□ -2.1
KRT40Q6A162 RNU7-70P-201ENST00000516941 66 ntBASIC1.93□□□□□ -2.1
KRT40Q6A162 AC021443.1-201ENST00000604478 211 ntBASIC1.93□□□□□ -2.1
KRT40Q6A162 AC106754.2-201ENST00000623006 233 ntBASIC1.93□□□□□ -2.1
KRT40Q6A162 RNU6-1123P-201ENST00000362347 106 ntBASIC1.92□□□□□ -2.1
KRT40Q6A162 Y_RNA.298-201ENST00000364960 107 ntBASIC1.92□□□□□ -2.1
KRT40Q6A162 Y_RNA.370-201ENST00000365589 108 ntBASIC1.92□□□□□ -2.1
KRT40Q6A162 SNORA24-201ENST00000384096 131 ntBASIC1.92□□□□□ -2.1
KRT40Q6A162 RNU6-42P-201ENST00000384165 107 ntBASIC1.92□□□□□ -2.1
KRT40Q6A162 Y_RNA.454-201ENST00000384224 113 ntBASIC1.92□□□□□ -2.1
KRT40Q6A162 RNU6-1104P-201ENST00000384723 104 ntBASIC1.92□□□□□ -2.1
KRT40Q6A162 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.92□□□□□ -2.1
KRT40Q6A162 AC004965.1-201ENST00000413033 213 ntBASIC1.92□□□□□ -2.1
KRT40Q6A162 RNU7-45P-201ENST00000459460 63 ntBASIC1.92□□□□□ -2.1
KRT40Q6A162 SUMO2P16-201ENST00000519475 264 ntBASIC1.92□□□□□ -2.1
KRT40Q6A162 AC022523.2-201ENST00000561045 150 ntBASIC1.92□□□□□ -2.1
KRT40Q6A162 FAM106DP-201ENST00000586416 501 ntBASIC1.92□□□□□ -2.1
KRT40Q6A162 MIR6504-201ENST00000613520 61 ntBASIC1.92□□□□□ -2.1
KRT40Q6A162 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.92□□□□□ -2.1
KRT40Q6A162 RNU6-755P-201ENST00000364400 103 ntBASIC1.91□□□□□ -2.1
KRT40Q6A162 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
KRT40Q6A162 SNORA67.5-201ENST00000391036 107 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 190.5 ms