Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 SNORD38B-202ENST00000625943 69 ntBASIC0.3□□□□□ -2.36
TNFRSF9Q07011 MIR330-201ENST00000362196 94 ntBASIC0.29□□□□□ -2.36
TNFRSF9Q07011 Y_RNA.30-201ENST00000362572 97 ntBASIC0.29□□□□□ -2.36
TNFRSF9Q07011 Y_RNA.66-201ENST00000362862 102 ntBASIC0.29□□□□□ -2.36
TNFRSF9Q07011 RNU6-888P-201ENST00000363010 101 ntBASIC0.29□□□□□ -2.36
TNFRSF9Q07011 Y_RNA.91-201ENST00000363042 107 ntBASIC0.29□□□□□ -2.36
TNFRSF9Q07011 RNU6-1309P-201ENST00000363305 108 ntBASIC0.29□□□□□ -2.36
TNFRSF9Q07011 RNA5SP457-201ENST00000363657 124 ntBASIC0.29□□□□□ -2.36
TNFRSF9Q07011 snoU2_19.4-201ENST00000364329 80 ntBASIC0.29□□□□□ -2.36
TNFRSF9Q07011 Y_RNA.237-201ENST00000364439 102 ntBASIC0.29□□□□□ -2.36
TNFRSF9Q07011 SNORD24-201ENST00000383884 75 ntBASIC0.29□□□□□ -2.36
TNFRSF9Q07011 MIR520H-201ENST00000385126 88 ntBASIC0.29□□□□□ -2.36
TNFRSF9Q07011 RNU6-1109P-201ENST00000391187 107 ntBASIC0.29□□□□□ -2.36
TNFRSF9Q07011 Y_RNA.622-201ENST00000411091 108 ntBASIC0.29□□□□□ -2.36
TNFRSF9Q07011 AC113618.1-201ENST00000416747 285 ntBASIC0.29□□□□□ -2.36
TNFRSF9Q07011 RNU7-73P-201ENST00000458743 63 ntBASIC0.29□□□□□ -2.36
TNFRSF9Q07011 RNU7-56P-201ENST00000458744 62 ntBASIC0.29□□□□□ -2.36
TNFRSF9Q07011 RNU6-504P-201ENST00000516568 104 ntBASIC0.29□□□□□ -2.36
TNFRSF9Q07011 RNA5SP330-201ENST00000517096 96 ntBASIC0.29□□□□□ -2.36
TNFRSF9Q07011 MIR4804-201ENST00000581683 73 ntBASIC0.29□□□□□ -2.36
TNFRSF9Q07011 MIR4676-201ENST00000583078 72 ntBASIC0.29□□□□□ -2.36
TNFRSF9Q07011 MIR6740-201ENST00000618268 113 ntBASIC0.29□□□□□ -2.36
TNFRSF9Q07011 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.29□□□□□ -2.36
TNFRSF9Q07011 Z97988.1-201ENST00000637697 135 ntBASIC0.29□□□□□ -2.36
TNFRSF9Q07011 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.29□□□□□ -2.36
TNFRSF9Q07011 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.28□□□□□ -2.36
TNFRSF9Q07011 Y_RNA.44-201ENST00000362676 108 ntBASIC0.28□□□□□ -2.36
TNFRSF9Q07011 Y_RNA.634-201ENST00000364811 113 ntBASIC0.28□□□□□ -2.36
TNFRSF9Q07011 MIR588-201ENST00000384900 83 ntBASIC0.28□□□□□ -2.36
TNFRSF9Q07011 MIR573-201ENST00000384964 99 ntBASIC0.28□□□□□ -2.36
TNFRSF9Q07011 MIR1197-201ENST00000408818 88 ntBASIC0.28□□□□□ -2.36
TNFRSF9Q07011 RNU6-1190P-201ENST00000410811 104 ntBASIC0.28□□□□□ -2.36
TNFRSF9Q07011 RNU6-602P-201ENST00000411155 105 ntBASIC0.28□□□□□ -2.36
TNFRSF9Q07011 RNU2-11P-201ENST00000459191 187 ntBASIC0.28□□□□□ -2.36
TNFRSF9Q07011 RPS29P24-201ENST00000486345 171 ntBASIC0.28□□□□□ -2.36
TNFRSF9Q07011 RNU6-1299P-201ENST00000516316 100 ntBASIC0.28□□□□□ -2.36
TNFRSF9Q07011 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.28□□□□□ -2.36
TNFRSF9Q07011 MIR4514-201ENST00000581410 57 ntBASIC0.28□□□□□ -2.36
TNFRSF9Q07011 MIR8087-201ENST00000612745 78 ntBASIC0.28□□□□□ -2.36
TNFRSF9Q07011 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
TNFRSF9Q07011 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
TNFRSF9Q07011 AC010332.2-201ENST00000613083 1904 ntBASIC0.28□□□□□ -2.36
TNFRSF9Q07011 MIR342-201ENST00000362212 99 ntBASIC0.27□□□□□ -2.37
TNFRSF9Q07011 MIR18A-201ENST00000362310 71 ntBASIC0.27□□□□□ -2.37
TNFRSF9Q07011 Y_RNA.7-201ENST00000362352 102 ntBASIC0.27□□□□□ -2.37
TNFRSF9Q07011 RNU6-238P-201ENST00000363313 106 ntBASIC0.27□□□□□ -2.37
TNFRSF9Q07011 RNU6-484P-201ENST00000384016 107 ntBASIC0.27□□□□□ -2.37
TNFRSF9Q07011 RNU6-639P-201ENST00000384074 107 ntBASIC0.27□□□□□ -2.37
TNFRSF9Q07011 SNORA1-201ENST00000384107 130 ntBASIC0.27□□□□□ -2.37
TNFRSF9Q07011 Y_RNA.440-201ENST00000384120 114 ntBASIC0.27□□□□□ -2.37
TNFRSF9Q07011 RNU6-1237P-201ENST00000384777 107 ntBASIC0.27□□□□□ -2.37
TNFRSF9Q07011 SNORD12C-201ENST00000386307 89 ntBASIC0.27□□□□□ -2.37
TNFRSF9Q07011 RNU6-1228P-201ENST00000391014 107 ntBASIC0.27□□□□□ -2.37
TNFRSF9Q07011 AL606845.1-201ENST00000404881 255 ntBASIC0.27□□□□□ -2.37
TNFRSF9Q07011 RNU2-55P-201ENST00000411146 174 ntBASIC0.27□□□□□ -2.37
TNFRSF9Q07011 RNU6-177P-201ENST00000411257 104 ntBASIC0.27□□□□□ -2.37
TNFRSF9Q07011 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.27□□□□□ -2.37
TNFRSF9Q07011 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.27□□□□□ -2.37
TNFRSF9Q07011 MTATP8P1-201ENST00000467115 207 ntBASIC0.27□□□□□ -2.37
TNFRSF9Q07011 TRBVB-201ENST00000477100 408 ntBASIC0.27□□□□□ -2.37
TNFRSF9Q07011 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.27□□□□□ -2.37
TNFRSF9Q07011 RNU6-561P-201ENST00000516222 102 ntBASIC0.27□□□□□ -2.37
TNFRSF9Q07011 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
TNFRSF9Q07011 RNU7-53P-201ENST00000516705 60 ntBASIC0.27□□□□□ -2.37
TNFRSF9Q07011 MIR3612-201ENST00000579753 87 ntBASIC0.27□□□□□ -2.37
TNFRSF9Q07011 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.27□□□□□ -2.37
TNFRSF9Q07011 Y_RNA.23-201ENST00000362496 106 ntBASIC0.26□□□□□ -2.37
TNFRSF9Q07011 Y_RNA.115-201ENST00000363272 98 ntBASIC0.26□□□□□ -2.37
TNFRSF9Q07011 SNORA1.1-201ENST00000364671 133 ntBASIC0.26□□□□□ -2.37
TNFRSF9Q07011 Y_RNA.304-201ENST00000365011 112 ntBASIC0.26□□□□□ -2.37
TNFRSF9Q07011 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
TNFRSF9Q07011 RNU6-1227P-201ENST00000383981 107 ntBASIC0.26□□□□□ -2.37
TNFRSF9Q07011 MT-TW-201ENST00000387382 68 ntBASIC0.26□□□□□ -2.37
TNFRSF9Q07011 SNORD77.3-201ENST00000391113 65 ntBASIC0.26□□□□□ -2.37
TNFRSF9Q07011 SNORD2.1-201ENST00000458762 69 ntBASIC0.26□□□□□ -2.37
TNFRSF9Q07011 snoU13.2-201ENST00000459201 104 ntBASIC0.26□□□□□ -2.37
TNFRSF9Q07011 RNU7-45P-201ENST00000459460 63 ntBASIC0.26□□□□□ -2.37
TNFRSF9Q07011 RNU6-998P-201ENST00000515894 101 ntBASIC0.26□□□□□ -2.37
TNFRSF9Q07011 RNU6-126P-201ENST00000516685 103 ntBASIC0.26□□□□□ -2.37
TNFRSF9Q07011 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.26□□□□□ -2.37
TNFRSF9Q07011 AL442663.2-201ENST00000554385 511 ntBASIC0.26□□□□□ -2.37
TNFRSF9Q07011 AC044792.1-201ENST00000593294 196 ntBASIC0.26□□□□□ -2.37
TNFRSF9Q07011 AC008608.1-201ENST00000603910 127 ntBASIC0.26□□□□□ -2.37
TNFRSF9Q07011 AL365265.1-201ENST00000621045 234 ntBASIC0.26□□□□□ -2.37
TNFRSF9Q07011 MIR376A2-201ENST00000636782 80 ntBASIC0.26□□□□□ -2.37
TNFRSF9Q07011 Y_RNA.82-201ENST00000363000 102 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 Y_RNA.92-201ENST00000363043 102 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 Y_RNA.199-201ENST00000364014 102 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 Y_RNA.235-201ENST00000364412 102 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 Y_RNA.306-201ENST00000365015 102 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 Y_RNA.312-201ENST00000365089 102 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 Y_RNA.322-201ENST00000365151 102 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 RNU6-716P-201ENST00000365621 103 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 RNU6-1189P-201ENST00000383958 107 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 Y_RNA.410-201ENST00000383992 113 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 Y_RNA.416-201ENST00000384014 113 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 Y_RNA.432-201ENST00000384087 111 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 MIR140-201ENST00000385282 100 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 MIR616-201ENST00000385293 97 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 MIR938-201ENST00000401216 83 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 163.1 ms