Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 RNU6-1123P-201ENST00000362347 106 ntBASIC2.04□□□□□ -2.08
HERVK_113P62684 RNU4-16P-201ENST00000364737 141 ntBASIC2.04□□□□□ -2.08
HERVK_113P62684 Y_RNA.346-201ENST00000365385 112 ntBASIC2.04□□□□□ -2.08
HERVK_113P62684 RNY1P6-201ENST00000384193 109 ntBASIC2.04□□□□□ -2.08
HERVK_113P62684 MIR548A3-201ENST00000385297 97 ntBASIC2.04□□□□□ -2.08
HERVK_113P62684 SNORA67.5-201ENST00000391036 107 ntBASIC2.04□□□□□ -2.08
HERVK_113P62684 RNU6-321P-201ENST00000410912 106 ntBASIC2.04□□□□□ -2.08
HERVK_113P62684 AP1B1P2-201ENST00000416196 106 ntBASIC2.04□□□□□ -2.08
HERVK_113P62684 RPS29P24-201ENST00000486345 171 ntBASIC2.04□□□□□ -2.08
HERVK_113P62684 HSPE1P19-201ENST00000603327 295 ntBASIC2.04□□□□□ -2.08
HERVK_113P62684 AC095038.3-201ENST00000634439 195 ntBASIC2.04□□□□□ -2.08
HERVK_113P62684 MTND5P18-201ENST00000445624 1801 ntBASIC2.03□□□□□ -2.08
HERVK_113P62684 RNU6-349P-201ENST00000362402 107 ntBASIC2.03□□□□□ -2.08
HERVK_113P62684 RNU6-215P-201ENST00000365169 102 ntBASIC2.03□□□□□ -2.08
HERVK_113P62684 RNA5SP259-201ENST00000365541 109 ntBASIC2.03□□□□□ -2.08
HERVK_113P62684 RNU6-1144P-201ENST00000384247 104 ntBASIC2.03□□□□□ -2.08
HERVK_113P62684 Y_RNA.528-201ENST00000384575 108 ntBASIC2.03□□□□□ -2.08
HERVK_113P62684 AC004965.1-201ENST00000413033 213 ntBASIC2.03□□□□□ -2.08
HERVK_113P62684 RNU7-67P-201ENST00000459003 62 ntBASIC2.03□□□□□ -2.08
HERVK_113P62684 SNORD123-201ENST00000459473 70 ntBASIC2.03□□□□□ -2.08
HERVK_113P62684 RNU7-96P-201ENST00000459535 64 ntBASIC2.03□□□□□ -2.08
HERVK_113P62684 MIR514B-201ENST00000516774 80 ntBASIC2.03□□□□□ -2.08
HERVK_113P62684 MIR548AR-201ENST00000582191 57 ntBASIC2.03□□□□□ -2.08
HERVK_113P62684 AL670379.3-201ENST00000605040 251 ntBASIC2.03□□□□□ -2.08
HERVK_113P62684 MIR502-201ENST00000606349 86 ntBASIC2.03□□□□□ -2.08
HERVK_113P62684 AL442644.1-201ENST00000454390 3105 ntBASIC2.02□□□□□ -2.09
HERVK_113P62684 Y_RNA.81-201ENST00000362997 102 ntBASIC2.02□□□□□ -2.09
HERVK_113P62684 MIR570-201ENST00000384917 97 ntBASIC2.02□□□□□ -2.09
HERVK_113P62684 SNORD28B-201ENST00000390993 75 ntBASIC2.02□□□□□ -2.09
HERVK_113P62684 AL035461.1-201ENST00000421490 332 ntBASIC2.02□□□□□ -2.09
HERVK_113P62684 RNU2-11P-201ENST00000459191 187 ntBASIC2.02□□□□□ -2.09
HERVK_113P62684 RNU6-998P-201ENST00000515894 101 ntBASIC2.02□□□□□ -2.09
HERVK_113P62684 RNU6-958P-201ENST00000516995 106 ntBASIC2.02□□□□□ -2.09
HERVK_113P62684 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.02□□□□□ -2.09
HERVK_113P62684 AC021443.1-201ENST00000604478 211 ntBASIC2.02□□□□□ -2.09
HERVK_113P62684 AL359851.1-201ENST00000569460 4997 ntBASIC2.02□□□□□ -2.09
HERVK_113P62684 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HERVK_113P62684 SNORA16.1-201ENST00000364597 132 ntBASIC2.01□□□□□ -2.09
HERVK_113P62684 RNU6-429P-201ENST00000384582 108 ntBASIC2.01□□□□□ -2.09
HERVK_113P62684 MIR548A1-201ENST00000385041 97 ntBASIC2.01□□□□□ -2.09
HERVK_113P62684 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
HERVK_113P62684 MIR676-201ENST00000390702 67 ntBASIC2.01□□□□□ -2.09
HERVK_113P62684 AL035398.1-201ENST00000430869 322 ntBASIC2.01□□□□□ -2.09
HERVK_113P62684 Y_RNA.649-201ENST00000459077 103 ntBASIC2.01□□□□□ -2.09
HERVK_113P62684 RNU6-919P-201ENST00000516731 104 ntBASIC2.01□□□□□ -2.09
HERVK_113P62684 SNORD48-201ENST00000364953 64 ntBASIC2□□□□□ -2.09
HERVK_113P62684 RNU6-44P-201ENST00000384045 107 ntBASIC2□□□□□ -2.09
HERVK_113P62684 SNORA70.7-201ENST00000384159 133 ntBASIC2□□□□□ -2.09
HERVK_113P62684 MIRLET7F2-201ENST00000385277 83 ntBASIC2□□□□□ -2.09
HERVK_113P62684 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2□□□□□ -2.09
HERVK_113P62684 RNY4P20-201ENST00000516678 93 ntBASIC2□□□□□ -2.09
HERVK_113P62684 AL096840.1-201ENST00000603287 93 ntBASIC2□□□□□ -2.09
HERVK_113P62684 AL359821.1-201ENST00000605519 182 ntBASIC2□□□□□ -2.09
HERVK_113P62684 MIR194-1-201ENST00000384892 85 ntBASIC1.99□□□□□ -2.09
HERVK_113P62684 MIR513A1-201ENST00000385138 129 ntBASIC1.99□□□□□ -2.09
HERVK_113P62684 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
HERVK_113P62684 MIR1287-201ENST00000408492 90 ntBASIC1.99□□□□□ -2.09
HERVK_113P62684 RNA5SP136-201ENST00000410906 107 ntBASIC1.99□□□□□ -2.09
HERVK_113P62684 JTBP1-201ENST00000441314 247 ntBASIC1.99□□□□□ -2.09
HERVK_113P62684 RNU7-164P-201ENST00000459221 62 ntBASIC1.99□□□□□ -2.09
HERVK_113P62684 RNU6-917P-201ENST00000516294 104 ntBASIC1.99□□□□□ -2.09
HERVK_113P62684 SNORA74.3-201ENST00000517108 154 ntBASIC1.99□□□□□ -2.09
HERVK_113P62684 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.99□□□□□ -2.09
HERVK_113P62684 SNORD116-21-201ENST00000384507 92 ntBASIC1.98□□□□□ -2.09
HERVK_113P62684 RNU6-1067P-201ENST00000384752 107 ntBASIC1.98□□□□□ -2.09
HERVK_113P62684 RPS29P29-201ENST00000456396 171 ntBASIC1.98□□□□□ -2.09
HERVK_113P62684 RNU7-45P-201ENST00000459460 63 ntBASIC1.98□□□□□ -2.09
HERVK_113P62684 DNAJC19P9-201ENST00000555084 351 ntBASIC1.98□□□□□ -2.09
HERVK_113P62684 AC243994.1-201ENST00000618627 109 ntBASIC1.98□□□□□ -2.09
HERVK_113P62684 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
HERVK_113P62684 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
HERVK_113P62684 MIR337-201ENST00000362281 93 ntBASIC1.97□□□□□ -2.09
HERVK_113P62684 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
HERVK_113P62684 RNU6-322P-201ENST00000516010 103 ntBASIC1.97□□□□□ -2.09
HERVK_113P62684 MIR4419B-201ENST00000577260 68 ntBASIC1.97□□□□□ -2.09
HERVK_113P62684 MIR4713-201ENST00000582691 75 ntBASIC1.97□□□□□ -2.09
HERVK_113P62684 MIR4305-201ENST00000583252 102 ntBASIC1.97□□□□□ -2.09
HERVK_113P62684 MIR4791-201ENST00000607666 84 ntBASIC1.97□□□□□ -2.09
HERVK_113P62684 Y_RNA.298-201ENST00000364960 107 ntBASIC1.96□□□□□ -2.1
HERVK_113P62684 TRMT112P2-201ENST00000512910 132 ntBASIC1.96□□□□□ -2.1
HERVK_113P62684 RNU7-53P-201ENST00000516705 60 ntBASIC1.96□□□□□ -2.1
HERVK_113P62684 AC022254.1-201ENST00000567857 235 ntBASIC1.96□□□□□ -2.1
HERVK_113P62684 AC021613.1-201ENST00000623880 111 ntBASIC1.96□□□□□ -2.1
HERVK_113P62684 Y_RNA.35-201ENST00000362601 101 ntBASIC1.95□□□□□ -2.1
HERVK_113P62684 RNY1P10-201ENST00000363268 113 ntBASIC1.95□□□□□ -2.1
HERVK_113P62684 SNORA51.10-201ENST00000384418 136 ntBASIC1.95□□□□□ -2.1
HERVK_113P62684 MIR520C-201ENST00000385005 87 ntBASIC1.95□□□□□ -2.1
HERVK_113P62684 MIR759-201ENST00000390224 91 ntBASIC1.95□□□□□ -2.1
HERVK_113P62684 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.95□□□□□ -2.1
HERVK_113P62684 RNU7-95P-201ENST00000459222 64 ntBASIC1.95□□□□□ -2.1
HERVK_113P62684 COX6CP6-201ENST00000490840 228 ntBASIC1.95□□□□□ -2.1
HERVK_113P62684 RNU7-123P-201ENST00000515911 60 ntBASIC1.95□□□□□ -2.1
HERVK_113P62684 SNORA31.4-201ENST00000516049 129 ntBASIC1.95□□□□□ -2.1
HERVK_113P62684 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.95□□□□□ -2.1
HERVK_113P62684 AC012493.3-201ENST00000604494 112 ntBASIC1.95□□□□□ -2.1
HERVK_113P62684 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.95□□□□□ -2.1
HERVK_113P62684 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.95□□□□□ -2.1
HERVK_113P62684 AL451046.2-201ENST00000403074 277 ntBASIC1.94□□□□□ -2.1
HERVK_113P62684 Y_RNA.709-201ENST00000516952 92 ntBASIC1.94□□□□□ -2.1
HERVK_113P62684 MIR4764-201ENST00000580680 88 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms