Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.07□□□□□ -2.24
APOBEC1P41238 RNU6-682P-201ENST00000363843 106 ntBASIC1.06□□□□□ -2.24
APOBEC1P41238 RNU4-84P-201ENST00000364200 139 ntBASIC1.06□□□□□ -2.24
APOBEC1P41238 MIR1302-7-201ENST00000408841 72 ntBASIC1.06□□□□□ -2.24
APOBEC1P41238 AC108059.2-201ENST00000434626 151 ntBASIC1.06□□□□□ -2.24
APOBEC1P41238 RNU7-70P-201ENST00000516941 66 ntBASIC1.06□□□□□ -2.24
APOBEC1P41238 snoU13.31-201ENST00000607291 104 ntBASIC1.06□□□□□ -2.24
APOBEC1P41238 MIR6078-201ENST00000611069 100 ntBASIC1.06□□□□□ -2.24
APOBEC1P41238 AC008163.1-202ENST00000636004 2889 ntBASIC1.06□□□□□ -2.24
APOBEC1P41238 RNU6-768P-201ENST00000384683 107 ntBASIC1.05□□□□□ -2.24
APOBEC1P41238 AC002429.1-201ENST00000437672 148 ntBASIC1.05□□□□□ -2.24
APOBEC1P41238 AL603825.1-201ENST00000438481 80 ntBASIC1.05□□□□□ -2.24
APOBEC1P41238 RNU6-1053P-201ENST00000515930 101 ntBASIC1.05□□□□□ -2.24
APOBEC1P41238 RNA5SP404-201ENST00000517118 132 ntBASIC1.05□□□□□ -2.24
APOBEC1P41238 MIR376A2-201ENST00000636782 80 ntBASIC1.05□□□□□ -2.24
APOBEC1P41238 RNU6-939P-201ENST00000384634 107 ntBASIC1.04□□□□□ -2.24
APOBEC1P41238 MIR19B1-201ENST00000384829 87 ntBASIC1.04□□□□□ -2.24
APOBEC1P41238 MIR548I3-201ENST00000408378 149 ntBASIC1.04□□□□□ -2.24
APOBEC1P41238 MIR3646-201ENST00000578301 84 ntBASIC1.04□□□□□ -2.24
APOBEC1P41238 MIR6516-201ENST00000630554 81 ntBASIC1.04□□□□□ -2.24
APOBEC1P41238 MIR6844-201ENST00000637122 62 ntBASIC1.04□□□□□ -2.24
APOBEC1P41238 MIR337-201ENST00000362281 93 ntBASIC1.03□□□□□ -2.24
APOBEC1P41238 RNU1-124P-201ENST00000363861 145 ntBASIC1.03□□□□□ -2.24
APOBEC1P41238 Y_RNA.441-201ENST00000384123 112 ntBASIC1.03□□□□□ -2.24
APOBEC1P41238 RNU6-913P-201ENST00000390913 95 ntBASIC1.03□□□□□ -2.24
APOBEC1P41238 SNORA75.5-201ENST00000391291 81 ntBASIC1.03□□□□□ -2.24
APOBEC1P41238 RNU6-613P-201ENST00000410412 108 ntBASIC1.03□□□□□ -2.24
APOBEC1P41238 RNA5SP261-201ENST00000410536 106 ntBASIC1.03□□□□□ -2.24
APOBEC1P41238 RNU6-1135P-201ENST00000411083 103 ntBASIC1.03□□□□□ -2.24
APOBEC1P41238 RNU5E-9P-201ENST00000411164 104 ntBASIC1.03□□□□□ -2.24
APOBEC1P41238 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.03□□□□□ -2.24
APOBEC1P41238 RNU7-121P-201ENST00000516604 62 ntBASIC1.03□□□□□ -2.24
APOBEC1P41238 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.03□□□□□ -2.24
APOBEC1P41238 AP000753.3-201ENST00000604083 169 ntBASIC1.03□□□□□ -2.24
APOBEC1P41238 MIR8055-201ENST00000610739 97 ntBASIC1.03□□□□□ -2.24
APOBEC1P41238 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
APOBEC1P41238 SNORA1.1-201ENST00000364671 133 ntBASIC1.02□□□□□ -2.25
APOBEC1P41238 RNU1-133P-201ENST00000364867 167 ntBASIC1.02□□□□□ -2.25
APOBEC1P41238 SNORD38B-201ENST00000384690 67 ntBASIC1.02□□□□□ -2.25
APOBEC1P41238 MT-TN-201ENST00000387400 73 ntBASIC1.02□□□□□ -2.25
APOBEC1P41238 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.02□□□□□ -2.25
APOBEC1P41238 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.02□□□□□ -2.25
APOBEC1P41238 MIR4498-201ENST00000577599 66 ntBASIC1.02□□□□□ -2.25
APOBEC1P41238 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.02□□□□□ -2.25
APOBEC1P41238 AL020996.3-201ENST00000606617 222 ntBASIC1.02□□□□□ -2.25
APOBEC1P41238 AC091932.4-201ENST00000623386 200 ntBASIC1.02□□□□□ -2.25
APOBEC1P41238 SNORD38B-202ENST00000625943 69 ntBASIC1.02□□□□□ -2.25
APOBEC1P41238 Z97988.1-201ENST00000637697 135 ntBASIC1.02□□□□□ -2.25
APOBEC1P41238 AL596211.1-201ENST00000569873 2277 ntBASIC1.01□□□□□ -2.25
APOBEC1P41238 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
APOBEC1P41238 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
APOBEC1P41238 Y_RNA.270-201ENST00000364693 104 ntBASIC1.01□□□□□ -2.25
APOBEC1P41238 Y_RNA.272-201ENST00000364696 102 ntBASIC1.01□□□□□ -2.25
APOBEC1P41238 RNU6-818P-201ENST00000364837 108 ntBASIC1.01□□□□□ -2.25
APOBEC1P41238 Y_RNA.327-201ENST00000365201 102 ntBASIC1.01□□□□□ -2.25
APOBEC1P41238 RNU6-1336P-201ENST00000383886 109 ntBASIC1.01□□□□□ -2.25
APOBEC1P41238 SNORD37.2-201ENST00000391075 66 ntBASIC1.01□□□□□ -2.25
APOBEC1P41238 RPS29P28-201ENST00000446439 141 ntBASIC1.01□□□□□ -2.25
APOBEC1P41238 RNU6-1149P-201ENST00000516810 97 ntBASIC1.01□□□□□ -2.25
APOBEC1P41238 DNAJC19P2-201ENST00000593340 302 ntBASIC1.01□□□□□ -2.25
APOBEC1P41238 FTX_2.1-201ENST00000618816 94 ntBASIC1.01□□□□□ -2.25
APOBEC1P41238 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1□□□□□ -2.25
APOBEC1P41238 Y_RNA.164-201ENST00000363709 102 ntBASIC1□□□□□ -2.25
APOBEC1P41238 RNU6-654P-201ENST00000364373 107 ntBASIC1□□□□□ -2.25
APOBEC1P41238 RNU6-1082P-201ENST00000364574 107 ntBASIC1□□□□□ -2.25
APOBEC1P41238 SNORD113.3-201ENST00000364630 78 ntBASIC1□□□□□ -2.25
APOBEC1P41238 MIR200A-201ENST00000384875 90 ntBASIC1□□□□□ -2.25
APOBEC1P41238 SNORD111-201ENST00000408139 94 ntBASIC1□□□□□ -2.25
APOBEC1P41238 RNU2-64P-201ENST00000411315 191 ntBASIC1□□□□□ -2.25
APOBEC1P41238 RPS23P4-201ENST00000487908 423 ntBASIC1□□□□□ -2.25
APOBEC1P41238 SCARNA15-202ENST00000516881 127 ntBASIC1□□□□□ -2.25
APOBEC1P41238 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1□□□□□ -2.25
APOBEC1P41238 MIR3152-201ENST00000579801 74 ntBASIC1□□□□□ -2.25
APOBEC1P41238 MIR4264-201ENST00000583520 66 ntBASIC1□□□□□ -2.25
APOBEC1P41238 AC131055.1-201ENST00000584626 316 ntBASIC1□□□□□ -2.25
APOBEC1P41238 MIR4295-201ENST00000585286 85 ntBASIC1□□□□□ -2.25
APOBEC1P41238 AC098479.1-201ENST00000609225 154 ntBASIC1□□□□□ -2.25
APOBEC1P41238 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.99□□□□□ -2.25
APOBEC1P41238 MIR377-201ENST00000362145 69 ntBASIC0.99□□□□□ -2.25
APOBEC1P41238 RNU6-125P-201ENST00000384505 107 ntBASIC0.99□□□□□ -2.25
APOBEC1P41238 SNORA2B-201ENST00000384583 137 ntBASIC0.99□□□□□ -2.25
APOBEC1P41238 MIR1285-1-201ENST00000408593 84 ntBASIC0.99□□□□□ -2.25
APOBEC1P41238 AC074198.2-201ENST00000508153 258 ntBASIC0.99□□□□□ -2.25
APOBEC1P41238 TRMT112P2-201ENST00000512910 132 ntBASIC0.99□□□□□ -2.25
APOBEC1P41238 Y_RNA.676-201ENST00000516393 96 ntBASIC0.99□□□□□ -2.25
APOBEC1P41238 AC036111.3-201ENST00000526389 112 ntBASIC0.99□□□□□ -2.25
APOBEC1P41238 AC023827.1-201ENST00000569247 97 ntBASIC0.99□□□□□ -2.25
APOBEC1P41238 AL359821.1-201ENST00000605519 182 ntBASIC0.99□□□□□ -2.25
APOBEC1P41238 AC106800.4-201ENST00000614905 153 ntBASIC0.99□□□□□ -2.25
APOBEC1P41238 MTND5P32-201ENST00000560711 1802 ntBASIC0.99□□□□□ -2.25
APOBEC1P41238 Y_RNA.52-201ENST00000362760 96 ntBASIC0.98□□□□□ -2.25
APOBEC1P41238 Y_RNA.354-201ENST00000365448 111 ntBASIC0.98□□□□□ -2.25
APOBEC1P41238 SNORA20-201ENST00000384662 132 ntBASIC0.98□□□□□ -2.25
APOBEC1P41238 RNU6-588P-201ENST00000410281 105 ntBASIC0.98□□□□□ -2.25
APOBEC1P41238 RPS3AP1-201ENST00000413190 320 ntBASIC0.98□□□□□ -2.25
APOBEC1P41238 AC090844.1-201ENST00000422019 156 ntBASIC0.98□□□□□ -2.25
APOBEC1P41238 HMGN1P33-201ENST00000432945 451 ntBASIC0.98□□□□□ -2.25
APOBEC1P41238 AC087343.1-201ENST00000477341 475 ntBASIC0.98□□□□□ -2.25
APOBEC1P41238 MIR3668-201ENST00000582138 75 ntBASIC0.98□□□□□ -2.25
APOBEC1P41238 MIR4781-201ENST00000585250 76 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms