Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SNORD115-13-201ENST00000363358 82 ntBASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 SNORD115-41-201ENST00000363608 82 ntBASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 SNORD115-11-201ENST00000363616 82 ntBASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 SNORD115-5-201ENST00000363633 82 ntBASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 SNORD115-39-201ENST00000363694 82 ntBASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 SNORD115-4-201ENST00000363810 82 ntBASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 SNORD115-16-201ENST00000363887 82 ntBASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 SNORD115-6-201ENST00000363942 82 ntBASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 SNORD115-42-201ENST00000364273 82 ntBASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 RNU6-219P-201ENST00000364728 107 ntBASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 SNORD115-15-201ENST00000364809 81 ntBASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 SNORD115-1-201ENST00000364961 82 ntBASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 SNORD115-26-201ENST00000365067 82 ntBASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 SNORD115-10-201ENST00000365073 81 ntBASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 SNORD115-43-201ENST00000365503 82 ntBASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 SNORD115-36-201ENST00000365629 82 ntBASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 AL034345.1-201ENST00000407768 123 ntBASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 AL603825.1-201ENST00000438481 80 ntBASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 RNU6-65P-201ENST00000516332 98 ntBASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 MIR5194-201ENST00000582634 120 ntBASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 AC245884.12-201ENST00000615364 59 ntBASIC3.09□□□□□ -1.91
CSB-PGBD3P0DP91 AL442644.1-201ENST00000454390 3105 ntBASIC3.08□□□□□ -1.92
CSB-PGBD3P0DP91 Y_RNA.95-201ENST00000363079 95 ntBASIC3.08□□□□□ -1.92
CSB-PGBD3P0DP91 SNORD45B-201ENST00000364617 72 ntBASIC3.08□□□□□ -1.92
CSB-PGBD3P0DP91 Y_RNA.313-201ENST00000365095 103 ntBASIC3.08□□□□□ -1.92
CSB-PGBD3P0DP91 RNU6-1201P-201ENST00000384227 107 ntBASIC3.08□□□□□ -1.92
CSB-PGBD3P0DP91 Y_RNA.470-201ENST00000384307 117 ntBASIC3.08□□□□□ -1.92
CSB-PGBD3P0DP91 RNU6-296P-201ENST00000384608 107 ntBASIC3.08□□□□□ -1.92
CSB-PGBD3P0DP91 SNORA64-201ENST00000384674 134 ntBASIC3.08□□□□□ -1.92
CSB-PGBD3P0DP91 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.08□□□□□ -1.92
CSB-PGBD3P0DP91 RNU7-113P-201ENST00000459273 62 ntBASIC3.08□□□□□ -1.92
CSB-PGBD3P0DP91 RNA5SP437-201ENST00000517249 129 ntBASIC3.08□□□□□ -1.92
CSB-PGBD3P0DP91 AL353997.5-201ENST00000618886 171 ntBASIC3.08□□□□□ -1.92
CSB-PGBD3P0DP91 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.07□□□□□ -1.92
CSB-PGBD3P0DP91 Y_RNA.377-201ENST00000365644 108 ntBASIC3.07□□□□□ -1.92
CSB-PGBD3P0DP91 SNORD116-22-201ENST00000384430 92 ntBASIC3.07□□□□□ -1.92
CSB-PGBD3P0DP91 RNU6-279P-201ENST00000391297 101 ntBASIC3.07□□□□□ -1.92
CSB-PGBD3P0DP91 SNORD88.1-201ENST00000408684 91 ntBASIC3.07□□□□□ -1.92
CSB-PGBD3P0DP91 AC015922.2-201ENST00000435593 184 ntBASIC3.07□□□□□ -1.92
CSB-PGBD3P0DP91 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.07□□□□□ -1.92
CSB-PGBD3P0DP91 Y_RNA.659-201ENST00000515994 113 ntBASIC3.07□□□□□ -1.92
CSB-PGBD3P0DP91 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.07□□□□□ -1.92
CSB-PGBD3P0DP91 MIR548AE2-201ENST00000583456 67 ntBASIC3.07□□□□□ -1.92
CSB-PGBD3P0DP91 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.07□□□□□ -1.92
CSB-PGBD3P0DP91 AC007336.1-201ENST00000576365 3828 ntBASIC3.07□□□□□ -1.92
CSB-PGBD3P0DP91 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CSB-PGBD3P0DP91 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CSB-PGBD3P0DP91 Y_RNA.299-201ENST00000364973 94 ntBASIC3.06□□□□□ -1.92
CSB-PGBD3P0DP91 MIR524-201ENST00000385242 87 ntBASIC3.06□□□□□ -1.92
CSB-PGBD3P0DP91 RNU6-521P-201ENST00000516663 105 ntBASIC3.06□□□□□ -1.92
CSB-PGBD3P0DP91 IGLV3-17-201ENST00000519099 244 ntBASIC3.06□□□□□ -1.92
CSB-PGBD3P0DP91 MIR5007-201ENST00000583098 95 ntBASIC3.06□□□□□ -1.92
CSB-PGBD3P0DP91 FO624990.1-201ENST00000636373 85 ntBASIC3.06□□□□□ -1.92
CSB-PGBD3P0DP91 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
CSB-PGBD3P0DP91 SNORA67.3-201ENST00000384366 140 ntBASIC3.05□□□□□ -1.92
CSB-PGBD3P0DP91 RNU6-887P-201ENST00000410660 100 ntBASIC3.05□□□□□ -1.92
CSB-PGBD3P0DP91 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.05□□□□□ -1.92
CSB-PGBD3P0DP91 RNA5SP481-201ENST00000516814 122 ntBASIC3.05□□□□□ -1.92
CSB-PGBD3P0DP91 Y_RNA.705-201ENST00000516862 110 ntBASIC3.05□□□□□ -1.92
CSB-PGBD3P0DP91 RNU2-19P-201ENST00000517288 84 ntBASIC3.05□□□□□ -1.92
CSB-PGBD3P0DP91 MIR4666B-201ENST00000578142 81 ntBASIC3.05□□□□□ -1.92
CSB-PGBD3P0DP91 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.05□□□□□ -1.92
CSB-PGBD3P0DP91 SNORD115-2-201ENST00000362842 82 ntBASIC3.04□□□□□ -1.92
CSB-PGBD3P0DP91 SNORD115-20-201ENST00000365099 82 ntBASIC3.04□□□□□ -1.92
CSB-PGBD3P0DP91 Y_RNA.437-201ENST00000384113 113 ntBASIC3.04□□□□□ -1.92
CSB-PGBD3P0DP91 RNU6-1031P-201ENST00000384773 107 ntBASIC3.04□□□□□ -1.92
CSB-PGBD3P0DP91 MIR221-201ENST00000385135 110 ntBASIC3.04□□□□□ -1.92
CSB-PGBD3P0DP91 MIR1267-201ENST00000408723 78 ntBASIC3.04□□□□□ -1.92
CSB-PGBD3P0DP91 SUMO1P4-201ENST00000429430 302 ntBASIC3.04□□□□□ -1.92
CSB-PGBD3P0DP91 RNU7-34P-201ENST00000459394 64 ntBASIC3.04□□□□□ -1.92
CSB-PGBD3P0DP91 RNU7-171P-201ENST00000459581 62 ntBASIC3.04□□□□□ -1.92
CSB-PGBD3P0DP91 AC067747.1-201ENST00000608026 250 ntBASIC3.04□□□□□ -1.92
CSB-PGBD3P0DP91 AC027279.3-201ENST00000625055 122 ntBASIC3.04□□□□□ -1.92
CSB-PGBD3P0DP91 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.04□□□□□ -1.92
CSB-PGBD3P0DP91 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CSB-PGBD3P0DP91 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.03□□□□□ -1.92
CSB-PGBD3P0DP91 RNU6-1319P-201ENST00000390855 104 ntBASIC3.03□□□□□ -1.92
CSB-PGBD3P0DP91 RNU6-747P-201ENST00000390928 104 ntBASIC3.03□□□□□ -1.92
CSB-PGBD3P0DP91 RNU6-241P-201ENST00000391148 104 ntBASIC3.03□□□□□ -1.92
CSB-PGBD3P0DP91 U8.16-201ENST00000391279 133 ntBASIC3.03□□□□□ -1.92
CSB-PGBD3P0DP91 SNORD23.1-201ENST00000408212 104 ntBASIC3.03□□□□□ -1.92
CSB-PGBD3P0DP91 RNA5SP100-201ENST00000410903 110 ntBASIC3.03□□□□□ -1.92
CSB-PGBD3P0DP91 RNA5SP59-201ENST00000410922 110 ntBASIC3.03□□□□□ -1.92
CSB-PGBD3P0DP91 Y_RNA.620-201ENST00000411009 88 ntBASIC3.03□□□□□ -1.92
CSB-PGBD3P0DP91 RNU6-177P-201ENST00000411257 104 ntBASIC3.03□□□□□ -1.92
CSB-PGBD3P0DP91 RNU6-857P-201ENST00000515893 110 ntBASIC3.03□□□□□ -1.92
CSB-PGBD3P0DP91 5S_rRNA.3-201ENST00000517021 110 ntBASIC3.03□□□□□ -1.92
CSB-PGBD3P0DP91 MIR4709-201ENST00000577272 72 ntBASIC3.03□□□□□ -1.92
CSB-PGBD3P0DP91 5S_rRNA.19-201ENST00000612131 110 ntBASIC3.03□□□□□ -1.92
CSB-PGBD3P0DP91 5S_rRNA.18-201ENST00000621941 110 ntBASIC3.03□□□□□ -1.92
CSB-PGBD3P0DP91 MIR6841-201ENST00000637129 72 ntBASIC3.03□□□□□ -1.92
CSB-PGBD3P0DP91 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CSB-PGBD3P0DP91 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CSB-PGBD3P0DP91 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CSB-PGBD3P0DP91 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CSB-PGBD3P0DP91 RNU6-424P-201ENST00000384367 105 ntBASIC3.02□□□□□ -1.93
CSB-PGBD3P0DP91 RNU6-1190P-201ENST00000410811 104 ntBASIC3.02□□□□□ -1.93
CSB-PGBD3P0DP91 RNU2-40P-201ENST00000410833 196 ntBASIC3.02□□□□□ -1.93
CSB-PGBD3P0DP91 snoU13.27-201ENST00000459278 104 ntBASIC3.02□□□□□ -1.93
CSB-PGBD3P0DP91 RPL23AP42-201ENST00000471152 471 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 211 ms