Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 RNA5SP480-201ENST00000516840 109 ntBASIC0.68□□□□□ -2.3
CSDE1O75534 MIR4643-201ENST00000577473 78 ntBASIC0.68□□□□□ -2.3
CSDE1O75534 MIR4264-201ENST00000583520 66 ntBASIC0.68□□□□□ -2.3
CSDE1O75534 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
CSDE1O75534 MIR377-201ENST00000362145 69 ntBASIC0.67□□□□□ -2.3
CSDE1O75534 Y_RNA.47-201ENST00000362697 108 ntBASIC0.67□□□□□ -2.3
CSDE1O75534 Y_RNA.304-201ENST00000365011 112 ntBASIC0.67□□□□□ -2.3
CSDE1O75534 RNU4-17P-201ENST00000365598 141 ntBASIC0.67□□□□□ -2.3
CSDE1O75534 Y_RNA.416-201ENST00000384014 113 ntBASIC0.67□□□□□ -2.3
CSDE1O75534 RNU6-484P-201ENST00000384016 107 ntBASIC0.67□□□□□ -2.3
CSDE1O75534 Y_RNA.466-201ENST00000384294 113 ntBASIC0.67□□□□□ -2.3
CSDE1O75534 MIR616-201ENST00000385293 97 ntBASIC0.67□□□□□ -2.3
CSDE1O75534 RNU6-1228P-201ENST00000391014 107 ntBASIC0.67□□□□□ -2.3
CSDE1O75534 MIR936-201ENST00000401264 98 ntBASIC0.67□□□□□ -2.3
CSDE1O75534 RPS26P5-201ENST00000418544 335 ntBASIC0.67□□□□□ -2.3
CSDE1O75534 AL138752.1-201ENST00000452964 351 ntBASIC0.67□□□□□ -2.3
CSDE1O75534 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.67□□□□□ -2.3
CSDE1O75534 MIR342-201ENST00000362212 99 ntBASIC0.66□□□□□ -2.3
CSDE1O75534 Y_RNA.7-201ENST00000362352 102 ntBASIC0.66□□□□□ -2.3
CSDE1O75534 Y_RNA.66-201ENST00000362862 102 ntBASIC0.66□□□□□ -2.3
CSDE1O75534 RNU6-1309P-201ENST00000363305 108 ntBASIC0.66□□□□□ -2.3
CSDE1O75534 Y_RNA.352-201ENST00000365439 102 ntBASIC0.66□□□□□ -2.3
CSDE1O75534 Y_RNA.393-201ENST00000383936 102 ntBASIC0.66□□□□□ -2.3
CSDE1O75534 RNU6-738P-201ENST00000384531 106 ntBASIC0.66□□□□□ -2.3
CSDE1O75534 RNU6-913P-201ENST00000390913 95 ntBASIC0.66□□□□□ -2.3
CSDE1O75534 SNORA79-201ENST00000408376 140 ntBASIC0.66□□□□□ -2.3
CSDE1O75534 MIR1827-201ENST00000408549 66 ntBASIC0.66□□□□□ -2.3
CSDE1O75534 RNU2-38P-201ENST00000410856 79 ntBASIC0.66□□□□□ -2.3
CSDE1O75534 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.66□□□□□ -2.3
CSDE1O75534 AC015818.7-201ENST00000428754 109 ntBASIC0.66□□□□□ -2.3
CSDE1O75534 AF228730.3-201ENST00000436691 102 ntBASIC0.66□□□□□ -2.3
CSDE1O75534 AC087499.7-201ENST00000441958 109 ntBASIC0.66□□□□□ -2.3
CSDE1O75534 AC113410.1-201ENST00000505029 247 ntBASIC0.66□□□□□ -2.3
CSDE1O75534 RNA5SP153-201ENST00000516498 76 ntBASIC0.66□□□□□ -2.3
CSDE1O75534 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
CSDE1O75534 Y_RNA.262-201ENST00000364641 102 ntBASIC0.65□□□□□ -2.31
CSDE1O75534 Y_RNA.277-201ENST00000364754 102 ntBASIC0.65□□□□□ -2.31
CSDE1O75534 Y_RNA.288-201ENST00000364854 92 ntBASIC0.65□□□□□ -2.31
CSDE1O75534 RNU6-1189P-201ENST00000383958 107 ntBASIC0.65□□□□□ -2.31
CSDE1O75534 SNORD38B-201ENST00000384690 67 ntBASIC0.65□□□□□ -2.31
CSDE1O75534 RNA5SP193-201ENST00000410353 107 ntBASIC0.65□□□□□ -2.31
CSDE1O75534 SNORD83.1-201ENST00000411362 77 ntBASIC0.65□□□□□ -2.31
CSDE1O75534 HMGN1P33-201ENST00000432945 451 ntBASIC0.65□□□□□ -2.31
CSDE1O75534 SNRPGP8-201ENST00000454064 226 ntBASIC0.65□□□□□ -2.31
CSDE1O75534 RNU7-73P-201ENST00000458743 63 ntBASIC0.65□□□□□ -2.31
CSDE1O75534 RNU7-62P-201ENST00000458856 62 ntBASIC0.65□□□□□ -2.31
CSDE1O75534 RNU6-561P-201ENST00000516222 102 ntBASIC0.65□□□□□ -2.31
CSDE1O75534 MIR4282-201ENST00000583613 67 ntBASIC0.65□□□□□ -2.31
CSDE1O75534 AL360085.1-201ENST00000604713 532 ntBASIC0.65□□□□□ -2.31
CSDE1O75534 SNORD38B-202ENST00000625943 69 ntBASIC0.65□□□□□ -2.31
CSDE1O75534 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.65□□□□□ -2.31
CSDE1O75534 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.64□□□□□ -2.31
CSDE1O75534 SNORA1.1-201ENST00000364671 133 ntBASIC0.64□□□□□ -2.31
CSDE1O75534 RNU6-934P-201ENST00000365154 107 ntBASIC0.64□□□□□ -2.31
CSDE1O75534 SNORD105-201ENST00000386910 85 ntBASIC0.64□□□□□ -2.31
CSDE1O75534 RNU6-381P-201ENST00000391259 108 ntBASIC0.64□□□□□ -2.31
CSDE1O75534 RNU6-733P-201ENST00000410759 104 ntBASIC0.64□□□□□ -2.31
CSDE1O75534 RNU6-1190P-201ENST00000410811 104 ntBASIC0.64□□□□□ -2.31
CSDE1O75534 RNU7-96P-201ENST00000459535 64 ntBASIC0.64□□□□□ -2.31
CSDE1O75534 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.64□□□□□ -2.31
CSDE1O75534 MIR4771-2-201ENST00000577758 74 ntBASIC0.64□□□□□ -2.31
CSDE1O75534 AC011195.1-201ENST00000578177 177 ntBASIC0.64□□□□□ -2.31
CSDE1O75534 MIR4771-1-201ENST00000582617 74 ntBASIC0.64□□□□□ -2.31
CSDE1O75534 AL442067.1-201ENST00000613261 223 ntBASIC0.64□□□□□ -2.31
CSDE1O75534 uc_338.6-201ENST00000613544 171 ntBASIC0.64□□□□□ -2.31
CSDE1O75534 Y_RNA.76-201ENST00000362931 109 ntBASIC0.63□□□□□ -2.31
CSDE1O75534 RNU6-653P-201ENST00000363074 106 ntBASIC0.63□□□□□ -2.31
CSDE1O75534 RNU6-728P-201ENST00000365375 104 ntBASIC0.63□□□□□ -2.31
CSDE1O75534 Y_RNA.410-201ENST00000383992 113 ntBASIC0.63□□□□□ -2.31
CSDE1O75534 Y_RNA.518-201ENST00000384552 113 ntBASIC0.63□□□□□ -2.31
CSDE1O75534 RNY1P4-201ENST00000384595 115 ntBASIC0.63□□□□□ -2.31
CSDE1O75534 MIR216A-201ENST00000385063 110 ntBASIC0.63□□□□□ -2.31
CSDE1O75534 MIR548I3-201ENST00000408378 149 ntBASIC0.63□□□□□ -2.31
CSDE1O75534 MIR548H3-201ENST00000408771 118 ntBASIC0.63□□□□□ -2.31
CSDE1O75534 AC244023.1-201ENST00000426884 112 ntBASIC0.63□□□□□ -2.31
CSDE1O75534 RNU2-11P-201ENST00000459191 187 ntBASIC0.63□□□□□ -2.31
CSDE1O75534 COX6CP6-201ENST00000490840 228 ntBASIC0.63□□□□□ -2.31
CSDE1O75534 RNU6-977P-201ENST00000516411 103 ntBASIC0.63□□□□□ -2.31
CSDE1O75534 RNU6-229P-201ENST00000516614 102 ntBASIC0.63□□□□□ -2.31
CSDE1O75534 AC242498.1-201ENST00000604134 111 ntBASIC0.63□□□□□ -2.31
CSDE1O75534 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CSDE1O75534 MIR302B-201ENST00000362188 73 ntBASIC0.62□□□□□ -2.31
CSDE1O75534 Y_RNA.23-201ENST00000362496 106 ntBASIC0.62□□□□□ -2.31
CSDE1O75534 RNU6-369P-201ENST00000362515 102 ntBASIC0.62□□□□□ -2.31
CSDE1O75534 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CSDE1O75534 SNORA1-201ENST00000384107 130 ntBASIC0.62□□□□□ -2.31
CSDE1O75534 MIR520F-201ENST00000384824 87 ntBASIC0.62□□□□□ -2.31
CSDE1O75534 MIR7-2-201ENST00000384970 110 ntBASIC0.62□□□□□ -2.31
CSDE1O75534 MIR1302-3-201ENST00000408128 138 ntBASIC0.62□□□□□ -2.31
CSDE1O75534 AL358176.2-201ENST00000425769 204 ntBASIC0.62□□□□□ -2.31
CSDE1O75534 RNU6-998P-201ENST00000515894 101 ntBASIC0.62□□□□□ -2.31
CSDE1O75534 RN7SL793P-201ENST00000583259 296 ntBASIC0.62□□□□□ -2.31
CSDE1O75534 AC097639.2-201ENST00000603159 172 ntBASIC0.62□□□□□ -2.31
CSDE1O75534 AC011921.3-201ENST00000605540 361 ntBASIC0.62□□□□□ -2.31
CSDE1O75534 MIR376A2-201ENST00000636782 80 ntBASIC0.62□□□□□ -2.31
CSDE1O75534 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
CSDE1O75534 RNA5SP347-201ENST00000362445 119 ntBASIC0.61□□□□□ -2.31
CSDE1O75534 Y_RNA.36-201ENST00000362602 112 ntBASIC0.61□□□□□ -2.31
CSDE1O75534 SNORD114-26-201ENST00000363543 72 ntBASIC0.61□□□□□ -2.31
CSDE1O75534 Y_RNA.292-201ENST00000364904 97 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 395.3 ms