Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.9□□□□□ -1.95
PTCD1O75127 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
PTCD1O75127 RNU1-51P-201ENST00000365345 176 ntBASIC2.89□□□□□ -1.95
PTCD1O75127 RNU6-652P-201ENST00000365488 107 ntBASIC2.89□□□□□ -1.95
PTCD1O75127 RNU6-616P-201ENST00000384353 107 ntBASIC2.89□□□□□ -1.95
PTCD1O75127 RNY1P4-201ENST00000384595 115 ntBASIC2.89□□□□□ -1.95
PTCD1O75127 MIR516B2-201ENST00000385190 85 ntBASIC2.89□□□□□ -1.95
PTCD1O75127 AL627390.1-201ENST00000396055 340 ntBASIC2.89□□□□□ -1.95
PTCD1O75127 AC093850.1-201ENST00000454121 251 ntBASIC2.89□□□□□ -1.95
PTCD1O75127 MIR4709-201ENST00000577272 72 ntBASIC2.89□□□□□ -1.95
PTCD1O75127 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
PTCD1O75127 Y_RNA.4-201ENST00000362333 112 ntBASIC2.88□□□□□ -1.95
PTCD1O75127 RNU6-112P-201ENST00000363599 104 ntBASIC2.88□□□□□ -1.95
PTCD1O75127 RNU6-1201P-201ENST00000384227 107 ntBASIC2.88□□□□□ -1.95
PTCD1O75127 SNORA27-201ENST00000384323 126 ntBASIC2.88□□□□□ -1.95
PTCD1O75127 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.88□□□□□ -1.95
PTCD1O75127 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.88□□□□□ -1.95
PTCD1O75127 RNU6-1018P-201ENST00000516577 106 ntBASIC2.88□□□□□ -1.95
PTCD1O75127 SCARNA16.3-201ENST00000516595 184 ntBASIC2.88□□□□□ -1.95
PTCD1O75127 RNU7-181P-201ENST00000517234 74 ntBASIC2.88□□□□□ -1.95
PTCD1O75127 AC019288.1-201ENST00000557918 224 ntBASIC2.88□□□□□ -1.95
PTCD1O75127 MIR4778-201ENST00000577635 80 ntBASIC2.88□□□□□ -1.95
PTCD1O75127 MIR6766-201ENST00000622641 72 ntBASIC2.88□□□□□ -1.95
PTCD1O75127 AC092881.1-201ENST00000638218 2733 ntBASIC2.88□□□□□ -1.95
PTCD1O75127 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.87□□□□□ -1.95
PTCD1O75127 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PTCD1O75127 SNORA18-201ENST00000384416 132 ntBASIC2.87□□□□□ -1.95
PTCD1O75127 RNU6-482P-201ENST00000391068 107 ntBASIC2.87□□□□□ -1.95
PTCD1O75127 RNU6-887P-201ENST00000410660 100 ntBASIC2.87□□□□□ -1.95
PTCD1O75127 Y_RNA.611-201ENST00000410682 108 ntBASIC2.87□□□□□ -1.95
PTCD1O75127 RN7SKP123-201ENST00000410732 291 ntBASIC2.87□□□□□ -1.95
PTCD1O75127 AL035398.1-201ENST00000430869 322 ntBASIC2.87□□□□□ -1.95
PTCD1O75127 RNU2-11P-201ENST00000459191 187 ntBASIC2.87□□□□□ -1.95
PTCD1O75127 Y_RNA.659-201ENST00000515994 113 ntBASIC2.87□□□□□ -1.95
PTCD1O75127 Y_RNA.247-201ENST00000364500 92 ntBASIC2.86□□□□□ -1.95
PTCD1O75127 MIR1267-201ENST00000408723 78 ntBASIC2.86□□□□□ -1.95
PTCD1O75127 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.86□□□□□ -1.95
PTCD1O75127 AL603825.1-201ENST00000438481 80 ntBASIC2.86□□□□□ -1.95
PTCD1O75127 snoU13.27-201ENST00000459278 104 ntBASIC2.86□□□□□ -1.95
PTCD1O75127 Y_RNA.705-201ENST00000516862 110 ntBASIC2.86□□□□□ -1.95
PTCD1O75127 AC090821.2-201ENST00000523552 176 ntBASIC2.86□□□□□ -1.95
PTCD1O75127 AC021613.1-201ENST00000623880 111 ntBASIC2.86□□□□□ -1.95
PTCD1O75127 AP000648.3-201ENST00000623539 4507 ntBASIC2.86□□□□□ -1.95
PTCD1O75127 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.85□□□□□ -1.95
PTCD1O75127 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PTCD1O75127 SNORA3A-201ENST00000364113 130 ntBASIC2.85□□□□□ -1.95
PTCD1O75127 SNORD45B-201ENST00000364617 72 ntBASIC2.85□□□□□ -1.95
PTCD1O75127 Y_RNA.377-201ENST00000365644 108 ntBASIC2.85□□□□□ -1.95
PTCD1O75127 Y_RNA.470-201ENST00000384307 117 ntBASIC2.85□□□□□ -1.95
PTCD1O75127 RNU6-296P-201ENST00000384608 107 ntBASIC2.85□□□□□ -1.95
PTCD1O75127 MIR452-201ENST00000385020 85 ntBASIC2.85□□□□□ -1.95
PTCD1O75127 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.85□□□□□ -1.95
PTCD1O75127 RNA5SP481-201ENST00000516814 122 ntBASIC2.85□□□□□ -1.95
PTCD1O75127 AC021506.2-201ENST00000612354 169 ntBASIC2.85□□□□□ -1.95
PTCD1O75127 U1.36-201ENST00000620684 176 ntBASIC2.85□□□□□ -1.95
PTCD1O75127 MIR548BB-201ENST00000626714 66 ntBASIC2.85□□□□□ -1.95
PTCD1O75127 MIR219B-201ENST00000637023 88 ntBASIC2.85□□□□□ -1.95
PTCD1O75127 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
PTCD1O75127 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.84□□□□□ -1.95
PTCD1O75127 Y_RNA.94-201ENST00000363068 106 ntBASIC2.84□□□□□ -1.95
PTCD1O75127 RNU2-40P-201ENST00000410833 196 ntBASIC2.84□□□□□ -1.95
PTCD1O75127 AL022718.1-201ENST00000412004 84 ntBASIC2.84□□□□□ -1.95
PTCD1O75127 HMGN2P23-201ENST00000456759 269 ntBASIC2.84□□□□□ -1.95
PTCD1O75127 RNU6-998P-201ENST00000515894 101 ntBASIC2.84□□□□□ -1.95
PTCD1O75127 RNU6-548P-201ENST00000517083 115 ntBASIC2.84□□□□□ -1.95
PTCD1O75127 IGLV3-17-201ENST00000519099 244 ntBASIC2.84□□□□□ -1.95
PTCD1O75127 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.84□□□□□ -1.95
PTCD1O75127 Y_RNA.426-201ENST00000384068 113 ntBASIC2.83□□□□□ -1.96
PTCD1O75127 MIR136-201ENST00000385207 82 ntBASIC2.83□□□□□ -1.96
PTCD1O75127 RNA5SP344-201ENST00000411081 104 ntBASIC2.83□□□□□ -1.96
PTCD1O75127 AC073261.1-201ENST00000429409 121 ntBASIC2.83□□□□□ -1.96
PTCD1O75127 MIR548AE2-201ENST00000583456 67 ntBASIC2.83□□□□□ -1.96
PTCD1O75127 AL353997.5-201ENST00000618886 171 ntBASIC2.83□□□□□ -1.96
PTCD1O75127 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.82□□□□□ -1.96
PTCD1O75127 SNORD115-34-201ENST00000362441 82 ntBASIC2.82□□□□□ -1.96
PTCD1O75127 SNORD115-12-201ENST00000362583 82 ntBASIC2.82□□□□□ -1.96
PTCD1O75127 SNORD115-29-201ENST00000362834 82 ntBASIC2.82□□□□□ -1.96
PTCD1O75127 SNORD115-9-201ENST00000362912 82 ntBASIC2.82□□□□□ -1.96
PTCD1O75127 SNORD115-21-201ENST00000362963 81 ntBASIC2.82□□□□□ -1.96
PTCD1O75127 SNORD115-14-201ENST00000363090 81 ntBASIC2.82□□□□□ -1.96
PTCD1O75127 VTRNA1-1-201ENST00000363120 99 ntBASIC2.82□□□□□ -1.96
PTCD1O75127 SNORD115-41-201ENST00000363608 82 ntBASIC2.82□□□□□ -1.96
PTCD1O75127 SNORD115-11-201ENST00000363616 82 ntBASIC2.82□□□□□ -1.96
PTCD1O75127 SNORD115-5-201ENST00000363633 82 ntBASIC2.82□□□□□ -1.96
PTCD1O75127 SNORD115-39-201ENST00000363694 82 ntBASIC2.82□□□□□ -1.96
PTCD1O75127 SNORD115-4-201ENST00000363810 82 ntBASIC2.82□□□□□ -1.96
PTCD1O75127 SNORD115-6-201ENST00000363942 82 ntBASIC2.82□□□□□ -1.96
PTCD1O75127 SNORD115-42-201ENST00000364273 82 ntBASIC2.82□□□□□ -1.96
PTCD1O75127 SNORD115-15-201ENST00000364809 81 ntBASIC2.82□□□□□ -1.96
PTCD1O75127 SNORD115-26-201ENST00000365067 82 ntBASIC2.82□□□□□ -1.96
PTCD1O75127 SNORD115-10-201ENST00000365073 81 ntBASIC2.82□□□□□ -1.96
PTCD1O75127 SNORD115-43-201ENST00000365503 82 ntBASIC2.82□□□□□ -1.96
PTCD1O75127 SNORD115-36-201ENST00000365629 82 ntBASIC2.82□□□□□ -1.96
PTCD1O75127 RNU1-52P-201ENST00000384190 164 ntBASIC2.82□□□□□ -1.96
PTCD1O75127 U8.15-201ENST00000390947 134 ntBASIC2.82□□□□□ -1.96
PTCD1O75127 RNU4-69P-201ENST00000410677 143 ntBASIC2.82□□□□□ -1.96
PTCD1O75127 RNU7-96P-201ENST00000459535 64 ntBASIC2.82□□□□□ -1.96
PTCD1O75127 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.82□□□□□ -1.96
PTCD1O75127 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.82□□□□□ -1.96
PTCD1O75127 MIR376B-201ENST00000614515 100 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 251.5 ms