Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RPL23AP63-201ENST00000498752 471 ntBASIC2.58□□□□□ -2
SOX1O00570 RNA5SP481-201ENST00000516814 122 ntBASIC2.58□□□□□ -2
SOX1O00570 RNA5SP480-201ENST00000516840 109 ntBASIC2.58□□□□□ -2
SOX1O00570 MIR4709-201ENST00000577272 72 ntBASIC2.58□□□□□ -2
SOX1O00570 MIR548AR-201ENST00000582191 57 ntBASIC2.58□□□□□ -2
SOX1O00570 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
SOX1O00570 Y_RNA.224-201ENST00000364308 111 ntBASIC2.57□□□□□ -2
SOX1O00570 RNA5SP173-201ENST00000364857 136 ntBASIC2.57□□□□□ -2
SOX1O00570 SNORA26.6-201ENST00000391256 115 ntBASIC2.57□□□□□ -2
SOX1O00570 AL023284.1-201ENST00000403956 276 ntBASIC2.57□□□□□ -2
SOX1O00570 RNU7-73P-201ENST00000458743 63 ntBASIC2.57□□□□□ -2
SOX1O00570 RNU7-34P-201ENST00000459394 64 ntBASIC2.57□□□□□ -2
SOX1O00570 RNA5SP57-201ENST00000459463 123 ntBASIC2.57□□□□□ -2
SOX1O00570 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.57□□□□□ -2
SOX1O00570 RN7SKP12-201ENST00000516275 143 ntBASIC2.57□□□□□ -2
SOX1O00570 RNU6-1018P-201ENST00000516577 106 ntBASIC2.57□□□□□ -2
SOX1O00570 AC021506.2-201ENST00000612354 169 ntBASIC2.57□□□□□ -2
SOX1O00570 MIR6717-201ENST00000622747 73 ntBASIC2.57□□□□□ -2
SOX1O00570 MIR6841-201ENST00000637129 72 ntBASIC2.57□□□□□ -2
SOX1O00570 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.57□□□□□ -2
SOX1O00570 RNY1P10-201ENST00000363268 113 ntBASIC2.56□□□□□ -2
SOX1O00570 RNU6-112P-201ENST00000363599 104 ntBASIC2.56□□□□□ -2
SOX1O00570 SNORD56.5-201ENST00000364281 72 ntBASIC2.56□□□□□ -2
SOX1O00570 RNU6-1134P-201ENST00000365156 101 ntBASIC2.56□□□□□ -2
SOX1O00570 Y_RNA.470-201ENST00000384307 117 ntBASIC2.56□□□□□ -2
SOX1O00570 SNORA18-201ENST00000384416 132 ntBASIC2.56□□□□□ -2
SOX1O00570 HMGN2P39-201ENST00000398005 273 ntBASIC2.56□□□□□ -2
SOX1O00570 RPS29P6-201ENST00000438196 145 ntBASIC2.56□□□□□ -2
SOX1O00570 SNORD123-201ENST00000459473 70 ntBASIC2.56□□□□□ -2
SOX1O00570 AC026436.1-201ENST00000510537 270 ntBASIC2.56□□□□□ -2
SOX1O00570 RNA5SP437-201ENST00000517249 129 ntBASIC2.56□□□□□ -2
SOX1O00570 MIR548AE2-201ENST00000583456 67 ntBASIC2.56□□□□□ -2
SOX1O00570 SNORA4-201ENST00000584302 138 ntBASIC2.56□□□□□ -2
SOX1O00570 AC243994.1-201ENST00000618627 109 ntBASIC2.56□□□□□ -2
SOX1O00570 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.55□□□□□ -2
SOX1O00570 RNU6-170P-201ENST00000362832 104 ntBASIC2.55□□□□□ -2
SOX1O00570 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SOX1O00570 RNU6-296P-201ENST00000384608 107 ntBASIC2.55□□□□□ -2
SOX1O00570 MIR660-201ENST00000385235 97 ntBASIC2.55□□□□□ -2
SOX1O00570 SNORA7.5-201ENST00000410672 110 ntBASIC2.55□□□□□ -2
SOX1O00570 AC004941.2-201ENST00000427009 228 ntBASIC2.55□□□□□ -2
SOX1O00570 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.55□□□□□ -2
SOX1O00570 snoU13.27-201ENST00000459278 104 ntBASIC2.55□□□□□ -2
SOX1O00570 TRMT112P2-201ENST00000512910 132 ntBASIC2.55□□□□□ -2
SOX1O00570 MIR3605-201ENST00000583214 100 ntBASIC2.55□□□□□ -2
SOX1O00570 AL359821.1-201ENST00000605519 182 ntBASIC2.55□□□□□ -2
SOX1O00570 MIR4791-201ENST00000607666 84 ntBASIC2.55□□□□□ -2
SOX1O00570 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.55□□□□□ -2
SOX1O00570 RNU6-616P-201ENST00000384353 107 ntBASIC2.54□□□□□ -2
SOX1O00570 Y_RNA.537-201ENST00000384626 109 ntBASIC2.54□□□□□ -2
SOX1O00570 RNU6-679P-201ENST00000391003 106 ntBASIC2.54□□□□□ -2
SOX1O00570 RNA5SP501-201ENST00000410990 112 ntBASIC2.54□□□□□ -2
SOX1O00570 BTF3P4-201ENST00000418852 495 ntBASIC2.54□□□□□ -2
SOX1O00570 RNU7-61P-201ENST00000515897 61 ntBASIC2.54□□□□□ -2
SOX1O00570 AP003327.1-201ENST00000529684 127 ntBASIC2.54□□□□□ -2
SOX1O00570 AL020996.3-201ENST00000606617 222 ntBASIC2.54□□□□□ -2
SOX1O00570 AC012531.4-201ENST00000616509 177 ntBASIC2.54□□□□□ -2
SOX1O00570 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.54□□□□□ -2
SOX1O00570 SNORD3E-202ENST00000627253 216 ntBASIC2.54□□□□□ -2
SOX1O00570 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SOX1O00570 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.53□□□□□ -2
SOX1O00570 Y_RNA.96-201ENST00000363092 109 ntBASIC2.53□□□□□ -2
SOX1O00570 SNORD45B-201ENST00000364617 72 ntBASIC2.53□□□□□ -2
SOX1O00570 Y_RNA.290-201ENST00000364879 114 ntBASIC2.53□□□□□ -2
SOX1O00570 RNU1-51P-201ENST00000365345 176 ntBASIC2.53□□□□□ -2
SOX1O00570 Y_RNA.377-201ENST00000365644 108 ntBASIC2.53□□□□□ -2
SOX1O00570 RNU6-1152P-201ENST00000384576 107 ntBASIC2.53□□□□□ -2
SOX1O00570 MIR526A1-201ENST00000384897 85 ntBASIC2.53□□□□□ -2
SOX1O00570 SNORD28B-201ENST00000390993 75 ntBASIC2.53□□□□□ -2
SOX1O00570 RNU6-644P-201ENST00000391155 98 ntBASIC2.53□□□□□ -2
SOX1O00570 AL353813.1-201ENST00000440700 253 ntBASIC2.53□□□□□ -2
SOX1O00570 RNU6-795P-201ENST00000516323 103 ntBASIC2.53□□□□□ -2
SOX1O00570 U1.36-201ENST00000620684 176 ntBASIC2.53□□□□□ -2
SOX1O00570 MIR1291-201ENST00000627649 87 ntBASIC2.53□□□□□ -2
SOX1O00570 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
SOX1O00570 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SOX1O00570 RNU6-573P-201ENST00000383938 106 ntBASIC2.52□□□□□ -2.01
SOX1O00570 RNU6-913P-201ENST00000390913 95 ntBASIC2.52□□□□□ -2.01
SOX1O00570 RNU6-521P-201ENST00000516663 105 ntBASIC2.52□□□□□ -2.01
SOX1O00570 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SOX1O00570 RNU6-1190P-201ENST00000410811 104 ntBASIC2.51□□□□□ -2.01
SOX1O00570 RNA5SP344-201ENST00000411081 104 ntBASIC2.51□□□□□ -2.01
SOX1O00570 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.51□□□□□ -2.01
SOX1O00570 MIR1270-201ENST00000459320 83 ntBASIC2.51□□□□□ -2.01
SOX1O00570 AC099513.1-201ENST00000490423 301 ntBASIC2.51□□□□□ -2.01
SOX1O00570 MIR4658-201ENST00000584344 65 ntBASIC2.51□□□□□ -2.01
SOX1O00570 U7.3-201ENST00000616123 62 ntBASIC2.51□□□□□ -2.01
SOX1O00570 MIR219B-201ENST00000637023 88 ntBASIC2.51□□□□□ -2.01
SOX1O00570 AC016717.2-201ENST00000609089 5141 ntBASIC2.51□□□□□ -2.01
SOX1O00570 MIR494-201ENST00000349529 81 ntBASIC2.5□□□□□ -2.01
SOX1O00570 MIR424-201ENST00000362227 98 ntBASIC2.5□□□□□ -2.01
SOX1O00570 RNU6-60P-201ENST00000364792 103 ntBASIC2.5□□□□□ -2.01
SOX1O00570 SNORD88.1-201ENST00000408684 91 ntBASIC2.5□□□□□ -2.01
SOX1O00570 MRPL35P3-201ENST00000421557 364 ntBASIC2.5□□□□□ -2.01
SOX1O00570 snoU13.16-201ENST00000459350 104 ntBASIC2.5□□□□□ -2.01
SOX1O00570 SNORA9.3-201ENST00000516383 129 ntBASIC2.5□□□□□ -2.01
SOX1O00570 MIR8055-201ENST00000610739 97 ntBASIC2.5□□□□□ -2.01
SOX1O00570 AL512310.12-203ENST00000640543 90 ntBASIC2.5□□□□□ -2.01
SOX1O00570 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SOX1O00570 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 194.4 ms