Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.55□□□□□ -2
TMEM88BA6NKF7 snoU13.9-201ENST00000458927 103 ntBASIC2.55□□□□□ -2
TMEM88BA6NKF7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
TMEM88BA6NKF7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.55□□□□□ -2
TMEM88BA6NKF7 AL627230.6-201ENST00000611129 280 ntBASIC2.55□□□□□ -2
TMEM88BA6NKF7 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TMEM88BA6NKF7 MIR548A1-201ENST00000385041 97 ntBASIC2.54□□□□□ -2
TMEM88BA6NKF7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.54□□□□□ -2
TMEM88BA6NKF7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.54□□□□□ -2
TMEM88BA6NKF7 RNA5SP144-201ENST00000410846 116 ntBASIC2.53□□□□□ -2
TMEM88BA6NKF7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.53□□□□□ -2
TMEM88BA6NKF7 RNU7-123P-201ENST00000515911 60 ntBASIC2.53□□□□□ -2
TMEM88BA6NKF7 Y_RNA.709-201ENST00000516952 92 ntBASIC2.53□□□□□ -2
TMEM88BA6NKF7 MIR3163-201ENST00000581592 73 ntBASIC2.53□□□□□ -2
TMEM88BA6NKF7 MIR6895-201ENST00000613497 78 ntBASIC2.53□□□□□ -2
TMEM88BA6NKF7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
TMEM88BA6NKF7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
TMEM88BA6NKF7 RNA5SP48-201ENST00000363969 126 ntBASIC2.52□□□□□ -2.01
TMEM88BA6NKF7 Y_RNA.224-201ENST00000364308 111 ntBASIC2.52□□□□□ -2.01
TMEM88BA6NKF7 Y_RNA.299-201ENST00000364973 94 ntBASIC2.52□□□□□ -2.01
TMEM88BA6NKF7 Y_RNA.354-201ENST00000365448 111 ntBASIC2.52□□□□□ -2.01
TMEM88BA6NKF7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.52□□□□□ -2.01
TMEM88BA6NKF7 SNORD111.1-201ENST00000516421 86 ntBASIC2.52□□□□□ -2.01
TMEM88BA6NKF7 AC121758.2-201ENST00000553271 193 ntBASIC2.52□□□□□ -2.01
TMEM88BA6NKF7 AC015688.6-201ENST00000577737 104 ntBASIC2.52□□□□□ -2.01
TMEM88BA6NKF7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.52□□□□□ -2.01
TMEM88BA6NKF7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TMEM88BA6NKF7 SNORA1.1-201ENST00000364671 133 ntBASIC2.51□□□□□ -2.01
TMEM88BA6NKF7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
TMEM88BA6NKF7 SNORD88.1-201ENST00000408684 91 ntBASIC2.51□□□□□ -2.01
TMEM88BA6NKF7 RPL39P39-201ENST00000455840 151 ntBASIC2.51□□□□□ -2.01
TMEM88BA6NKF7 SNORA77B-201ENST00000578179 125 ntBASIC2.51□□□□□ -2.01
TMEM88BA6NKF7 AL020996.3-201ENST00000606617 222 ntBASIC2.51□□□□□ -2.01
TMEM88BA6NKF7 MIR8063-201ENST00000621930 81 ntBASIC2.51□□□□□ -2.01
TMEM88BA6NKF7 MIR21-201ENST00000362134 72 ntBASIC2.5□□□□□ -2.01
TMEM88BA6NKF7 RNU6-429P-201ENST00000384582 108 ntBASIC2.5□□□□□ -2.01
TMEM88BA6NKF7 RPS3AP1-201ENST00000413190 320 ntBASIC2.5□□□□□ -2.01
TMEM88BA6NKF7 AP1B1P2-201ENST00000416196 106 ntBASIC2.5□□□□□ -2.01
TMEM88BA6NKF7 RNU6-589P-201ENST00000516485 107 ntBASIC2.5□□□□□ -2.01
TMEM88BA6NKF7 AC007012.1-201ENST00000567192 175 ntBASIC2.5□□□□□ -2.01
TMEM88BA6NKF7 MIR3198-2-201ENST00000577868 80 ntBASIC2.5□□□□□ -2.01
TMEM88BA6NKF7 GHRLOS.1-201ENST00000610995 70 ntBASIC2.5□□□□□ -2.01
TMEM88BA6NKF7 MIR6840-201ENST00000611937 71 ntBASIC2.5□□□□□ -2.01
TMEM88BA6NKF7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.5□□□□□ -2.01
TMEM88BA6NKF7 AC009831.4-201ENST00000620744 325 ntBASIC2.5□□□□□ -2.01
TMEM88BA6NKF7 SNORA22.1-201ENST00000362701 134 ntBASIC2.49□□□□□ -2.01
TMEM88BA6NKF7 Y_RNA.430-201ENST00000384081 110 ntBASIC2.49□□□□□ -2.01
TMEM88BA6NKF7 RNU6-1065P-201ENST00000384513 106 ntBASIC2.49□□□□□ -2.01
TMEM88BA6NKF7 RNU7-113P-201ENST00000459273 62 ntBASIC2.49□□□□□ -2.01
TMEM88BA6NKF7 RNU6-922P-201ENST00000516753 99 ntBASIC2.49□□□□□ -2.01
TMEM88BA6NKF7 SNORA4-201ENST00000584302 138 ntBASIC2.49□□□□□ -2.01
TMEM88BA6NKF7 HSPE1P19-201ENST00000603327 295 ntBASIC2.49□□□□□ -2.01
TMEM88BA6NKF7 MIR4251-201ENST00000635819 61 ntBASIC2.49□□□□□ -2.01
TMEM88BA6NKF7 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.49□□□□□ -2.01
TMEM88BA6NKF7 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TMEM88BA6NKF7 RNA5SP190-201ENST00000365222 118 ntBASIC2.48□□□□□ -2.01
TMEM88BA6NKF7 RNU6-44P-201ENST00000384045 107 ntBASIC2.48□□□□□ -2.01
TMEM88BA6NKF7 HMGN2P19-201ENST00000425149 265 ntBASIC2.48□□□□□ -2.01
TMEM88BA6NKF7 HSPE1P24-201ENST00000450782 238 ntBASIC2.48□□□□□ -2.01
TMEM88BA6NKF7 RPS27P21-201ENST00000486977 252 ntBASIC2.48□□□□□ -2.01
TMEM88BA6NKF7 CYP3A52P-201ENST00000563326 91 ntBASIC2.48□□□□□ -2.01
TMEM88BA6NKF7 MIR3935-201ENST00000583472 104 ntBASIC2.48□□□□□ -2.01
TMEM88BA6NKF7 MIR6717-201ENST00000622747 73 ntBASIC2.48□□□□□ -2.01
TMEM88BA6NKF7 AL589743.1-201ENST00000551932 2712 ntBASIC2.48□□□□□ -2.01
TMEM88BA6NKF7 RNU2-35P-201ENST00000516446 142 ntBASIC2.47□□□□□ -2.01
TMEM88BA6NKF7 MIR4679-2-201ENST00000578358 77 ntBASIC2.47□□□□□ -2.01
TMEM88BA6NKF7 MIR5694-201ENST00000581190 76 ntBASIC2.47□□□□□ -2.01
TMEM88BA6NKF7 AC103810.8-201ENST00000607347 118 ntBASIC2.47□□□□□ -2.01
TMEM88BA6NKF7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TMEM88BA6NKF7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
TMEM88BA6NKF7 Y_RNA.35-201ENST00000362601 101 ntBASIC2.46□□□□□ -2.02
TMEM88BA6NKF7 Y_RNA.49-201ENST00000362714 112 ntBASIC2.46□□□□□ -2.02
TMEM88BA6NKF7 Y_RNA.531-201ENST00000384589 121 ntBASIC2.46□□□□□ -2.02
TMEM88BA6NKF7 Y_RNA.540-201ENST00000384638 111 ntBASIC2.46□□□□□ -2.02
TMEM88BA6NKF7 RNU4-62P-201ENST00000410125 130 ntBASIC2.46□□□□□ -2.02
TMEM88BA6NKF7 SNORD13-201ENST00000459299 104 ntBASIC2.46□□□□□ -2.02
TMEM88BA6NKF7 AC079140.2-201ENST00000506193 142 ntBASIC2.46□□□□□ -2.02
TMEM88BA6NKF7 AC004812.1-201ENST00000540773 146 ntBASIC2.46□□□□□ -2.02
TMEM88BA6NKF7 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.46□□□□□ -2.02
TMEM88BA6NKF7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.46□□□□□ -2.02
TMEM88BA6NKF7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
TMEM88BA6NKF7 SNORA22-201ENST00000383907 134 ntBASIC2.45□□□□□ -2.02
TMEM88BA6NKF7 RNU6-913P-201ENST00000390913 95 ntBASIC2.45□□□□□ -2.02
TMEM88BA6NKF7 SNORA48.3-201ENST00000391081 134 ntBASIC2.45□□□□□ -2.02
TMEM88BA6NKF7 RNY4P18-201ENST00000391107 89 ntBASIC2.45□□□□□ -2.02
TMEM88BA6NKF7 AL356379.1-201ENST00000414105 126 ntBASIC2.45□□□□□ -2.02
TMEM88BA6NKF7 POLR2J4-204ENST00000418424 324 ntBASIC2.45□□□□□ -2.02
TMEM88BA6NKF7 RNU7-45P-201ENST00000459460 63 ntBASIC2.45□□□□□ -2.02
TMEM88BA6NKF7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
TMEM88BA6NKF7 AL445685.2-201ENST00000422551 342 ntBASIC2.44□□□□□ -2.02
TMEM88BA6NKF7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.44□□□□□ -2.02
TMEM88BA6NKF7 Y_RNA.281-201ENST00000364774 94 ntBASIC2.43□□□□□ -2.02
TMEM88BA6NKF7 SNORD77B-201ENST00000391112 67 ntBASIC2.43□□□□□ -2.02
TMEM88BA6NKF7 SNORA26.6-201ENST00000391256 115 ntBASIC2.43□□□□□ -2.02
TMEM88BA6NKF7 AC063976.4-201ENST00000421971 163 ntBASIC2.43□□□□□ -2.02
TMEM88BA6NKF7 RPL30P7-201ENST00000479312 323 ntBASIC2.43□□□□□ -2.02
TMEM88BA6NKF7 AC113410.1-201ENST00000505029 247 ntBASIC2.43□□□□□ -2.02
TMEM88BA6NKF7 RNU6-250P-201ENST00000516958 103 ntBASIC2.43□□□□□ -2.02
TMEM88BA6NKF7 Y_RNA.783-201ENST00000613546 102 ntBASIC2.43□□□□□ -2.02
TMEM88BA6NKF7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 189.6 ms